Bradford Gibson, PhD

TitleNon-Senate Acad Emeritus WOS
InstitutionUniversity of California San Francisco
DepartmentPharmaceutical Chemistry
Address401 Parnassus Ave.
San Francisco CA 94143
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    Collapse Biography 
    Collapse Education and Training
    University of California, Santa BarbaraB.A.1975Biochemistry

    Collapse Research 
    Collapse Research Activities and Funding
    Lysine Acetylation in N. gonorrhoeae Quorum Sensing and Biofilm Formation
    NIH/NIAID R01AI108255Mar 5, 2014 - Feb 28, 2019
    Role: Co-Principal Investigator
    TripleTOF 5600 High Resolution Mass Spectrometer
    NIH S10OD016281Jun 20, 2013 - May 31, 2014
    Role: Principal Investigator
    AB SCIEX QTRAP 5500 LC MS/MS system
    NIH/NCRR S10RR027953Jul 1, 2010 - Jun 30, 2011
    Role: Principal Investigator
    Mass spectrometry and imaging technologies in Geroscience
    NIH/NIA PL1AG032118Sep 30, 2007 - Jun 30, 2013
    Role: Principal Investigator
    QSTAR Elite Quadrupole-o-TOF LC/MS/MS System
    NIH/NCRR S10RR024615Sep 20, 2007 - Sep 19, 2008
    Role: Principal Investigator
    Basic Mechanisms in Aging and Age Related Disease
    NIH P30AG025708Jul 1, 2005 - Jun 30, 2011
    Role: Co-Investigator
    Mitochondrial Dysfunction in Aging and Disease
    NIH P01AG025901Apr 1, 2005 - Feb 28, 2013
    Role: Co-Investigator
    4000 Q TRAP triple quadrupole/linear ion trap LC/MS/MS
    NIH/NCRR S10RR021222Apr 1, 2005 - Mar 31, 2006
    Role: Principal Investigator
    Proteomics of Complex 1 Inhibition in GSH-Depleted Cells
    NIH/NINDS R21NS043620Apr 1, 2003 - Mar 31, 2006
    Role: Principal Investigator
    NIH/NCRR S10RR014601Sep 1, 2000 - Aug 31, 2001
    Role: Principal Investigator
    Innate immune response to microbial infection
    NIH P01AI044642Sep 30, 1999 - Jul 31, 2015
    Role: Co-Investigator
    Structure and Function of Haemophilus ducreyi LOS
    NIH/NIAID R01AI031254Sep 1, 1994 - Mar 31, 2008
    Role: Principal Investigator
    Bio-Organic Biomedical Mass Spectrometry Resource
    NIH P41RR001614Mar 1, 1982 - May 31, 2015
    Role: Co-Investigator
    Resource for Biocomputing, Visualization, and Informatics
    NIH/NCRR P41RR001081Jun 1, 1976 - Sep 14, 2012
    Role: Co-Investigator

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    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Basisty N, Meyer JG, Wei L, Gibson BW, Schilling B. Simultaneous Quantification of the Acetylome and Succinylome by 'One-Pot' Affinity Enrichment. Proteomics. 2018 Jul 23; e1800123. PMID: 30035354.
      View in: PubMed
    2. Post DMB, Slütter B, Schilling B, Chande AT, Rasmussen JA, Jones BD, D'Souza AK, Reinders LM, Harty JT, Gibson BW, Apicella MA. Characterization of Inner and Outer Membrane Proteins from Francisella tularensis Strains LVS and Schu S4 and Identification of Potential Subunit Vaccine Candidates. MBio. 2017 Oct 10; 8(5). PMID: 29018123.
      View in: PubMed
    3. Meyer JG, Mukkamalla S, Steen H, Nesvizhskii AI, Gibson BW, Schilling B. PIQED: automated identification and quantification of protein modifications from DIA-MS data. Nat Methods. 2017 Jun 29; 14(7):646-647. PMID: 28661500.
      View in: PubMed
    4. Post DMB, Schilling B, Reinders LM, D'Souza AK, Ketterer MR, Kiel SJ, Chande AT, Apicella MA, Gibson BW. Identification and characterization of AckA-dependent protein acetylation in Neisseria gonorrhoeae. PLoS One. 2017; 12(6):e0179621. PMID: 28654654.
      View in: PubMed
    5. Schilling B, Gibson BW, Hunter CL. Generation of High-Quality SWATH® Acquisition Data for Label-free Quantitative Proteomics Studies Using TripleTOF® Mass Spectrometers. Methods Mol Biol. 2017; 1550:223-233. PMID: 28188533.
      View in: PubMed
    6. Mark KA, Dumas KJ, Bhaumik D, Schilling B, Davis S, Oron TR, Sorensen DJ, Lucanic M, Brem RB, Melov S, Ramanathan A, Gibson BW, Lithgow GJ. Vitamin D Promotes Protein Homeostasis and Longevity via the Stress Response Pathway Genes skn-1, ire-1, and xbp-1. Cell Rep. 2016 10 25; 17(5):1227-1237. PMID: 27783938.
      View in: PubMed
    7. Meyer JG, D'Souza AK, Sorensen DJ, Rardin MJ, Wolfe AJ, Gibson BW, Schilling B. Quantification of Lysine Acetylation and Succinylation Stoichiometry in Proteins Using Mass Spectrometric Data-Independent Acquisitions (SWATH). J Am Soc Mass Spectrom. 2016 Nov; 27(11):1758-1771. PMID: 27590315.
      View in: PubMed
    8. Post DM, Ketterer MR, Coffin JE, Reinders LM, Munson RS, Bair T, Murphy TF, Foster ED, Gibson BW, Apicella MA. Comparative Analyses of the Lipooligosaccharides from Nontypeable Haemophilus influenzae and Haemophilus haemolyticus Show Differences in Sialic Acid and Phosphorylcholine Modifications. Infect Immun. 2016 Jan 04; 84(3):765-74. PMID: 26729761; PMCID: PMC4771351.
    9. Schilling B, MacLean B, Held JM, Sahu AK, Rardin MJ, Sorensen DJ, Peters T, Wolfe AJ, Hunter CL, MacCoss MJ, Gibson BW. Multiplexed, Scheduled, High-Resolution Parallel Reaction Monitoring on a Full Scan QqTOF Instrument with Integrated Data-Dependent and Targeted Mass Spectrometric Workflows. Anal Chem. 2015 Oct 20; 87(20):10222-9. PMID: 26398777.
      View in: PubMed
    10. Schilling B, Christensen D, Davis R, Sahu AK, Hu LI, Walker-Peddakotla A, Sorensen DJ, Zemaitaitis B, Gibson BW, Wolfe AJ. Protein acetylation dynamics in response to carbon overflow in Escherichia coli. Mol Microbiol. 2015 Dec; 98(5):847-63. PMID: 26264774; PMCID: PMC4715485 [Available on 12/01/16].
    11. O'Brien R, DeGiacomo F, Holcomb J, Bonner A, Ring KL, Zhang N, Zafar K, Weiss A, Lager B, Schilling B, Gibson BW, Chen S, Kwak S, Ellerby LM. Integration-independent Transgenic Huntington Disease Fragment Mouse Models Reveal Distinct Phenotypes and Life Span in Vivo. J Biol Chem. 2015 Jul 31; 290(31):19287-306. PMID: 26025364; PMCID: PMC4521048.
    12. Rardin MJ, Schilling B, Cheng LY, MacLean BX, Sorensen DJ, Sahu AK, MacCoss MJ, Vitek O, Gibson BW. MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments. Mol Cell Proteomics. 2015 Sep; 14(9):2405-19. PMID: 25987414; PMCID: PMC4563724.
    13. Post DM, Held JM, Ketterer MR, Phillips NJ, Sahu A, Apicella MA, Gibson BW. Comparative analyses of proteins from Haemophilus influenzae biofilm and planktonic populations using metabolic labeling and mass spectrometry. BMC Microbiol. 2014 Dec 31; 14:329. PMID: 25551439; PMCID: PMC4302520.
    14. Klang IM, Schilling B, Sorensen DJ, Sahu AK, Kapahi P, Andersen JK, Swoboda P, Killilea DW, Gibson BW, Lithgow GJ. Iron promotes protein insolubility and aging in C. elegans. Aging (Albany NY). 2014 Nov; 6(11):975-91. PMID: 25554795; PMCID: PMC4276790.
    15. Wilson-Edell KA, Kehasse A, Scott GK, Yau C, Rothschild DE, Schilling B, Gabriel BS, Yevtushenko MA, Hanson IM, Held JM, Gibson BW, Benz CC. RPL24: a potential therapeutic target whose depletion or acetylation inhibits polysome assembly and cancer cell growth. Oncotarget. 2014 Jul 15; 5(13):5165-76. PMID: 24970821; PMCID: PMC4148130.
    16. Zawadzka AM, Schilling B, Held JM, Sahu AK, Cusack MP, Drake PM, Fisher SJ, Gibson BW. Variation and quantification among a target set of phosphopeptides in human plasma by multiple reaction monitoring and SWATH-MS2 data-independent acquisition. Electrophoresis. 2014 Dec; 35(24):3487-97. PMID: 24853916; PMCID: PMC4565165.
    17. Broudy D, Killeen T, Choi M, Shulman N, Mani DR, Abbatiello SE, Mani D, Ahmad R, Sahu AK, Schilling B, Tamura K, Boss Y, Sharma V, Gibson BW, Carr SA, Vitek O, MacCoss MJ, MacLean B. A framework for installable external tools in Skyline. Bioinformatics. 2014 Sep 01; 30(17):2521-3. PMID: 24813211; PMCID: PMC4147880.
    18. Zawadzka AM, Schilling B, Cusack MP, Sahu AK, Drake P, Fisher SJ, Benz CC, Gibson BW. Phosphoprotein secretome of tumor cells as a source of candidates for breast cancer biomarkers in plasma. Mol Cell Proteomics. 2014 Apr; 13(4):1034-49. PMID: 24505115; PMCID: PMC3977182.
    19. Rasmussen JA, Post DM, Gibson BW, Lindemann SR, Apicella MA, Meyerholz DK, Jones BD. Francisella tularensis Schu S4 lipopolysaccharide core sugar and O-antigen mutants are attenuated in a mouse model of tularemia. Infect Immun. 2014 Apr; 82(4):1523-39. PMID: 24452684; PMCID: PMC3993386.
    20. Rardin MJ, He W, Nishida Y, Newman JC, Carrico C, Danielson SR, Guo A, Gut P, Sahu AK, Li B, Uppala R, Fitch M, Riiff T, Zhu L, Zhou J, Mulhern D, Stevens RD, Ilkayeva OR, Newgard CB, Jacobson MP, Hellerstein M, Goetzman ES, Gibson BW, Verdin E. SIRT5 regulates the mitochondrial lysine succinylome and metabolic networks. Cell Metab. 2013 Dec 03; 18(6):920-33. PMID: 24315375; PMCID: PMC4105152.
    21. Schilling B, Hunt J, Gibson BW, Apicella MA. Site-specific acylation changes in the lipid A of Escherichia coli lpxL mutants grown at high temperatures. Innate Immun. 2014 Apr; 20(3):269-82. PMID: 23812252; PMCID: PMC3983921.
    22. Held JM, Schilling B, D'Souza AK, Srinivasan T, Behring JB, Sorensen DJ, Benz CC, Gibson BW. Label-Free Quantitation and Mapping of the ErbB2 Tumor Receptor by Multiple Protease Digestion with Data-Dependent (MS1) and Data-Independent (MS2) Acquisitions. Int J Proteomics. 2013; 2013:791985. PMID: 23710360; PMCID: PMC3654371.
    23. Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW. Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways. Proc Natl Acad Sci U S A. 2013 Apr 16; 110(16):6601-6. PMID: 23576753; PMCID: PMC3631688.
    24. Rardin MJ, Held JM, Gibson BW. Targeted quantitation of acetylated lysine peptides by selected reaction monitoring mass spectrometry. Methods Mol Biol. 2013; 1077:121-31. PMID: 24014403; PMCID: PMC4378680.
    25. Choi SW, Gerencser AA, Ng R, Flynn JM, Melov S, Danielson SR, Gibson BW, Nicholls DG, Bredesen DE, Brand MD. No consistent bioenergetic defects in presynaptic nerve terminals isolated from mouse models of Alzheimer's disease. J Neurosci. 2012 Nov 21; 32(47):16775-84. PMID: 23175831; PMCID: PMC3736741.
    26. Vernochet C, Mourier A, Bezy O, Macotela Y, Boucher J, Rardin MJ, An D, Lee KY, Ilkayeva OR, Zingaretti CM, Emanuelli B, Smyth G, Cinti S, Newgard CB, Gibson BW, Larsson NG, Kahn CR. Adipose-specific deletion of TFAM increases mitochondrial oxidation and protects mice against obesity and insulin resistance. Cell Metab. 2012 Dec 05; 16(6):765-76. PMID: 23168219; PMCID: PMC3529641.
    27. Peters TW, Rardin MJ, Czerwieniec G, Evani US, Reis-Rodrigues P, Lithgow GJ, Mooney SD, Gibson BW, Hughes RE. Tor1 regulates protein solubility in Saccharomyces cerevisiae. Mol Biol Cell. 2012 Dec; 23(24):4679-88. PMID: 23097491; PMCID: PMC3521677.
    28. Flynn JM, Czerwieniec GA, Choi SW, Day NU, Gibson BW, Hubbard A, Melov S. Proteogenomics of synaptosomal mitochondrial oxidative stress. Free Radic Biol Med. 2012 Sep 01; 53(5):1048-60. PMID: 22796328; PMCID: PMC3436120.
    29. Phillips NJ, Steichen CT, Schilling B, Post DM, Niles RK, Bair TB, Falsetta ML, Apicella MA, Gibson BW. Proteomic analysis of Neisseria gonorrhoeae biofilms shows shift to anaerobic respiration and changes in nutrient transport and outermembrane proteins. PLoS One. 2012; 7(6):e38303. PMID: 22701624; PMCID: PMC3368942.
    30. Held JM, Britton DJ, Scott GK, Lee EL, Schilling B, Baldwin MA, Gibson BW, Benz CC. Ligand binding promotes CDK-dependent phosphorylation of ER-alpha on hinge serine 294 but inhibits ligand-independent phosphorylation of serine 305. Mol Cancer Res. 2012 Aug; 10(8):1120-32. PMID: 22669764; PMCID: PMC3950940.
    31. Agrawal P, Chen YT, Schilling B, Gibson BW, Hughes RE. Ubiquitin-specific peptidase 9, X-linked (USP9X) modulates activity of mammalian target of rapamycin (mTOR). J Biol Chem. 2012 Jun 15; 287(25):21164-75. PMID: 22544753; PMCID: PMC3375539.
    32. Zhang N, Li B, Al-Ramahi I, Cong X, Held JM, Kim E, Botas J, Gibson BW, Ellerby LM. Inhibition of lipid signaling enzyme diacylglycerol kinase epsilon attenuates mutant huntingtin toxicity. J Biol Chem. 2012 Jun 15; 287(25):21204-13. PMID: 22511757; PMCID: PMC3375542.
    33. Schilling B, Rardin MJ, MacLean BX, Zawadzka AM, Frewen BE, Cusack MP, Sorensen DJ, Bereman MS, Jing E, Wu CC, Verdin E, Kahn CR, Maccoss MJ, Gibson BW. Platform-independent and label-free quantitation of proteomic data using MS1 extracted ion chromatograms in skyline: application to protein acetylation and phosphorylation. Mol Cell Proteomics. 2012 May; 11(5):202-14. PMID: 22454539; PMCID: PMC3418851.
    34. Post DM, Yu L, Krasity BC, Choudhury B, Mandel MJ, Brennan CA, Ruby EG, McFall-Ngai MJ, Gibson BW, Apicella MA. O-antigen and core carbohydrate of Vibrio fischeri lipopolysaccharide: composition and analysis of their role in Euprymna scolopes light organ colonization. J Biol Chem. 2012 Mar 09; 287(11):8515-30. PMID: 22247546; PMCID: PMC3318738.
    35. Reis-Rodrigues P, Czerwieniec G, Peters TW, Evani US, Alavez S, Gaman EA, Vantipalli M, Mooney SD, Gibson BW, Lithgow GJ, Hughes RE. Proteomic analysis of age-dependent changes in protein solubility identifies genes that modulate lifespan. Aging Cell. 2012 Feb; 11(1):120-7. PMID: 22103665; PMCID: PMC3437485.
    36. Held JM, Gibson BW. Regulatory control or oxidative damage? Proteomic approaches to interrogate the role of cysteine oxidation status in biological processes. Mol Cell Proteomics. 2012 Apr; 11(4):R111.013037. PMID: 22159599; PMCID: PMC3322581.
    37. Rogers AN, Chen D, McColl G, Czerwieniec G, Felkey K, Gibson BW, Hubbard A, Melov S, Lithgow GJ, Kapahi P. Life span extension via eIF4G inhibition is mediated by posttranscriptional remodeling of stress response gene expression in C. elegans. Cell Metab. 2011 Jul 06; 14(1):55-66. PMID: 21723504; PMCID: PMC3220185.
    38. Cong X, Held JM, DeGiacomo F, Bonner A, Chen JM, Schilling B, Czerwieniec GA, Gibson BW, Ellerby LM. Mass spectrometric identification of novel lysine acetylation sites in huntingtin. Mol Cell Proteomics. 2011 Oct; 10(10):M111.009829. PMID: 21685499; PMCID: PMC3205870.
    39. Lucanic M, Held JM, Vantipalli MC, Klang IM, Graham JB, Gibson BW, Lithgow GJ, Gill MS. N-acylethanolamine signalling mediates the effect of diet on lifespan in Caenorhabditis elegans. Nature. 2011 May 12; 473(7346):226-9. PMID: 21562563; PMCID: PMC3093655.
    40. Li B, Held JM, Schilling B, Danielson SR, Gibson BW. Confident identification of 3-nitrotyrosine modifications in mass spectral data across multiple mass spectrometry platforms. J Proteomics. 2011 Oct 19; 74(11):2510-21. PMID: 21514405; PMCID: PMC3191283.
    41. Danielson SR, Held JM, Oo M, Riley R, Gibson BW, Andersen JK. Quantitative mapping of reversible mitochondrial Complex I cysteine oxidation in a Parkinson disease mouse model. J Biol Chem. 2011 Mar 04; 286(9):7601-8. PMID: 21196577; PMCID: PMC3045014.
    42. Sperandio S, Poksay KS, Schilling B, Crippen D, Gibson BW, Bredesen DE. Identification of new modulators and protein alterations in non-apoptotic programmed cell death. J Cell Biochem. 2010 Dec 15; 111(6):1401-12. PMID: 20830744.
      View in: PubMed
    43. Apicella MA, Post DM, Fowler AC, Jones BD, Rasmussen JA, Hunt JR, Imagawa S, Choudhury B, Inzana TJ, Maier TM, Frank DW, Zahrt TC, Chaloner K, Jennings MP, McLendon MK, Gibson BW. Identification, characterization and immunogenicity of an O-antigen capsular polysaccharide of Francisella tularensis. PLoS One. 2010 Jul 06; 5(7):e11060. PMID: 20625403; PMCID: PMC2897883.
    44. Marx C, Held JM, Gibson BW, Benz CC. ErbB2 trafficking and degradation associated with K48 and K63 polyubiquitination. Cancer Res. 2010 May 01; 70(9):3709-17. PMID: 20406983; PMCID: PMC2862137.
    45. Held JM, Danielson SR, Behring JB, Atsriku C, Britton DJ, Puckett RL, Schilling B, Campisi J, Benz CC, Gibson BW. Targeted quantitation of site-specific cysteine oxidation in endogenous proteins using a differential alkylation and multiple reaction monitoring mass spectrometry approach. Mol Cell Proteomics. 2010 Jul; 9(7):1400-10. PMID: 20233844; PMCID: PMC2938085.
    46. Lee BY, Jethwaney D, Schilling B, Clemens DL, Gibson BW, Horwitz MA. The Mycobacterium bovis bacille Calmette-Guerin phagosome proteome. Mol Cell Proteomics. 2010 Jan; 9(1):32-53. PMID: 19815536; PMCID: PMC2808266.
    47. Danielson SR, Held JM, Schilling B, Oo M, Gibson BW, Andersen JK. Preferentially increased nitration of alpha-synuclein at tyrosine-39 in a cellular oxidative model of Parkinson's disease. Anal Chem. 2009 Sep 15; 81(18):7823-8. PMID: 19697948; PMCID: PMC2748813.
    48. Gafni J, Cong X, Chen SF, Gibson BW, Ellerby LM. Calpain-1 cleaves and activates caspase-7. J Biol Chem. 2009 Sep 11; 284(37):25441-9. PMID: 19617626; PMCID: PMC2757245.
    49. Atsriku C, Britton DJ, Held JM, Schilling B, Scott GK, Gibson BW, Benz CC, Baldwin MA. Systematic mapping of posttranslational modifications in human estrogen receptor-alpha with emphasis on novel phosphorylation sites. Mol Cell Proteomics. 2009 Mar; 8(3):467-80. PMID: 18984578; PMCID: PMC2649810.
    50. Britton DJ, Scott GK, Schilling B, Atsriku C, Held JM, Gibson BW, Benz CC, Baldwin MA. A novel serine phosphorylation site detected in the N-terminal domain of estrogen receptor isolated from human breast cancer cells. J Am Soc Mass Spectrom. 2008 May; 19(5):729-40. PMID: 18367407.
      View in: PubMed
    51. Johnston JW, Coussens NP, Allen S, Houtman JC, Turner KH, Zaleski A, Ramaswamy S, Gibson BW, Apicella MA. Characterization of the N-acetyl-5-neuraminic acid-binding site of the extracytoplasmic solute receptor (SiaP) of nontypeable Haemophilus influenzae strain 2019. J Biol Chem. 2008 Jan 11; 283(2):855-65. PMID: 17947229.
      View in: PubMed
    52. Johnston JW, Zaleski A, Allen S, Mootz JM, Armbruster D, Gibson BW, Apicella MA, Munson RS. Regulation of sialic acid transport and catabolism in Haemophilus influenzae. Mol Microbiol. 2007 Oct; 66(1):26-39. PMID: 17880422.
      View in: PubMed
    53. Post DM, Gibson BW. Proposed second class of Haemophilus ducreyi strains show altered protein and lipooligosaccharide profiles. Proteomics. 2007 Sep; 7(17):3131-42. PMID: 17676659.
      View in: PubMed
    54. McLendon MK, Schilling B, Hunt JR, Apicella MA, Gibson BW. Identification of LpxL, a late acyltransferase of Francisella tularensis. Infect Immun. 2007 Nov; 75(11):5518-31. PMID: 17724076; PMCID: PMC2168286.
    55. Jethwaney D, Islam MR, Leidal KG, de Bernabe DB, Campbell KP, Nauseef WM, Gibson BW. Proteomic analysis of plasma membrane and secretory vesicles from human neutrophils. Proteome Sci. 2007 Aug 10; 5:12. PMID: 17692124; PMCID: PMC2075486.
    56. Atsriku C, Benz CC, Scott GK, Gibson BW, Baldwin MA. Quantification of cysteine oxidation in human estrogen receptor by mass spectrometry. Anal Chem. 2007 Apr 15; 79(8):3083-90. PMID: 17373775; PMCID: PMC2536661.
    57. Schilling B, McLendon MK, Phillips NJ, Apicella MA, Gibson BW. Characterization of lipid A acylation patterns in Francisella tularensis, Francisella novicida, and Francisella philomiragia using multiple-stage mass spectrometry and matrix-assisted laser desorption/ionization on an intermediate vacuum source linear ion trap. Anal Chem. 2007 Feb 01; 79(3):1034-42. PMID: 17263332; PMCID: PMC2556175.
    58. Post DM, Munson RS, Baker B, Zhong H, Bozue JA, Gibson BW. Identification of genes involved in the expression of atypical lipooligosaccharide structures from a second class of Haemophilus ducreyi. Infect Immun. 2007 Jan; 75(1):113-21. PMID: 17030566; PMCID: PMC1828386.
    59. Erwin AL, Allen S, Ho DK, Bonthuis PJ, Bonthius PJ, Jarisch J, Nelson KL, Tsao DL, Unrath WC, Watson ME, Gibson BW, Apicella MA, Smith AL. Role of lgtC in resistance of nontypeable Haemophilus influenzae strain R2866 to human serum. Infect Immun. 2006 Nov; 74(11):6226-35. PMID: 16966407; PMCID: PMC1695526.
    60. Held JM, White MP, Fisher AL, Gibson BW, Lithgow GJ, Gill MS. DAF-12-dependent rescue of dauer formation in Caenorhabditis elegans by (25S)-cholestenoic acid. Aging Cell. 2006 Aug; 5(4):283-91. PMID: 16913876.
      View in: PubMed
    61. Schilling B, Gafni J, Torcassi C, Cong X, Row RH, LaFevre-Bernt MA, Cusack MP, Ratovitski T, Hirschhorn R, Ross CA, Gibson BW, Ellerby LM. Huntingtin phosphorylation sites mapped by mass spectrometry. Modulation of cleavage and toxicity. J Biol Chem. 2006 Aug 18; 281(33):23686-97. PMID: 16782707.
      View in: PubMed
    62. Benz CC, Atsriku C, Yau C, Britton D, Schilling B, Gibson BW, Baldwin MA, Scott GK. Novel pathways associated with quinone-induced stress in breast cancer cells. Drug Metab Rev. 2006; 38(4):601-13. PMID: 17145690.
      View in: PubMed
    63. Post DM, Zhang D, Weiss JP, Gibson BW. Stable isotope metabolic labeling of Neisseria meningitidis lipooligosaccharide. J Endotoxin Res. 2006; 12(2):93-8. PMID: 16690012.
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    64. Post DM, Mungur R, Gibson BW, Munson RS. Identification of a novel sialic acid transporter in Haemophilus ducreyi. Infect Immun. 2005 Oct; 73(10):6727-35. PMID: 16177350; PMCID: PMC1230923.
    65. Allen S, Zaleski A, Johnston JW, Gibson BW, Apicella MA. Novel sialic acid transporter of Haemophilus influenzae. Infect Immun. 2005 Sep; 73(9):5291-300. PMID: 16113244; PMCID: PMC1231074.
    66. Post DM, Zhang D, Eastvold JS, Teghanemt A, Gibson BW, Weiss JP. Biochemical and functional characterization of membrane blebs purified from Neisseria meningitidis serogroup B. J Biol Chem. 2005 Nov 18; 280(46):38383-94. PMID: 16103114.
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    67. Schilling B, Murray J, Yoo CB, Row RH, Cusack MP, Capaldi RA, Gibson BW. Proteomic analysis of succinate dehydrogenase and ubiquinol-cytochrome c reductase (Complex II and III) isolated by immunoprecipitation from bovine and mouse heart mitochondria. Biochim Biophys Acta. 2006 Feb; 1762(2):213-22. PMID: 16120479.
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    68. Edwards KJ, Allen S, Gibson BW, Campagnari AA. Characterization of a cluster of three glycosyltransferase enzymes essential for Moraxella catarrhalis lipooligosaccharide assembly. J Bacteriol. 2005 May; 187(9):2939-47. PMID: 15838019; PMCID: PMC1082826.
    69. Schilling B, Aggeler R, Schulenberg B, Murray J, Row RH, Capaldi RA, Gibson BW. Mass spectrometric identification of a novel phosphorylation site in subunit NDUFA10 of bovine mitochondrial complex I. FEBS Lett. 2005 Apr 25; 579(11):2485-90. PMID: 15848193.
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    70. Gibson BW. The human mitochondrial proteome: oxidative stress, protein modifications and oxidative phosphorylation. Int J Biochem Cell Biol. 2005 May; 37(5):927-34. PMID: 15743667.
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    71. Schilling B, Bharath M M S, Row RH, Murray J, Cusack MP, Capaldi RA, Freed CR, Prasad KN, Andersen JK, Gibson BW. Rapid purification and mass spectrometric characterization of mitochondrial NADH dehydrogenase (Complex I) from rodent brain and a dopaminergic neuronal cell line. Mol Cell Proteomics. 2005 Jan; 4(1):84-96. PMID: 15591592.
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    72. Gill MS, Held JM, Fisher AL, Gibson BW, Lithgow GJ. Lipophilic regulator of a developmental switch in Caenorhabditis elegans. Aging Cell. 2004 Dec; 3(6):413-21. PMID: 15569358.
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    73. Phillips NJ, Schilling B, McLendon MK, Apicella MA, Gibson BW. Novel modification of lipid A of Francisella tularensis. Infect Immun. 2004 Sep; 72(9):5340-8. PMID: 15322031; PMCID: PMC517411.
    74. Gaucher SP, Taylor SW, Fahy E, Zhang B, Warnock DE, Ghosh SS, Gibson BW. Expanded coverage of the human heart mitochondrial proteome using multidimensional liquid chromatography coupled with tandem mass spectrometry. J Proteome Res. 2004 May-Jun; 3(3):495-505. PMID: 15253431.
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    75. Gibson BW. Exploiting proteomics in the discovery of drugs that target mitochondrial oxidative damage. Sci Aging Knowledge Environ. 2004 Mar 17; 2004(11):pe12. PMID: 15028863.
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    76. Jin K, Mao XO, Cottrell B, Schilling B, Xie L, Row RH, Sun Y, Peel A, Childs J, Gendeh G, Gibson BW, Greenberg DA. Proteomic and immunochemical characterization of a role for stathmin in adult neurogenesis. FASEB J. 2004 Feb; 18(2):287-99. PMID: 14769823.
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    77. Luke NR, Allen S, Gibson BW, Campagnari AA. Identification of a 3-deoxy-D-manno-octulosonic acid biosynthetic operon in Moraxella catarrhalis and analysis of a KdsA-deficient isogenic mutant. Infect Immun. 2003 Nov; 71(11):6426-34. PMID: 14573664; PMCID: PMC219605.
    78. Rao RV, Poksay KS, Castro-Obregon S, Schilling B, Row RH, del Rio G, Gibson BW, Ellerby HM, Bredesen DE. Molecular components of a cell death pathway activated by endoplasmic reticulum stress. J Biol Chem. 2004 Jan 02; 279(1):177-87. PMID: 14561754.
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    79. Scheffler NK, Falick AM, Hall SC, Ray WC, Post DM, Munson RS, Gibson BW. Proteome of Haemophilus ducreyi by 2-D SDS-PAGE and mass spectrometry: strain variation, virulence, and carbohydrate expression. J Proteome Res. 2003 Sep-Oct; 2(5):523-33. PMID: 14582649.
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    80. Schilling B, Row RH, Gibson BW, Guo X, Young MM. MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides. J Am Soc Mass Spectrom. 2003 Aug; 14(8):834-50. PMID: 12892908.
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    81. Lee JC, Taylor CV, Gaucher SP, Toneff T, Taupenot L, Yasothornsrikul S, Mahata SK, Sei C, Parmer RJ, Neveu JM, Lane WS, Gibson BW, O'Connor DT, Hook VY. Primary sequence characterization of catestatin intermediates and peptides defines proteolytic cleavage sites utilized for converting chromogranin a into active catestatin secreted from neuroendocrine chromaffin cells. Biochemistry. 2003 Jun 17; 42(23):6938-46. PMID: 12795588.
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    82. Goon S, Schilling B, Tullius MV, Gibson BW, Bertozzi CR. Metabolic incorporation of unnatural sialic acids into Haemophilus ducreyi lipooligosaccharides. Proc Natl Acad Sci U S A. 2003 Mar 18; 100(6):3089-94. PMID: 12615992; PMCID: PMC152251.
    83. Taylor SW, Fahy E, Zhang B, Glenn GM, Warnock DE, Wiley S, Murphy AN, Gaucher SP, Capaldi RA, Gibson BW, Ghosh SS. Characterization of the human heart mitochondrial proteome. Nat Biotechnol. 2003 Mar; 21(3):281-6. PMID: 12592411.
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    84. Post DM, Ketterer MR, Phillips NJ, Gibson BW, Apicella MA. The msbB mutant of Neisseria meningitidis strain NMB has a defect in lipooligosaccharide assembly and transport to the outer membrane. Infect Immun. 2003 Feb; 71(2):647-55. PMID: 12540541; PMCID: PMC145375.
    85. Sun S, Scheffler NK, Gibson BW, Wang J, Munson RS. Identification and characterization of the N-acetylglucosamine glycosyltransferase gene of Haemophilus ducreyi. Infect Immun. 2002 Oct; 70(10):5887-92. PMID: 12228324; PMCID: PMC128345.
    86. Taylor SW, Warnock DE, Glenn GM, Zhang B, Fahy E, Gaucher SP, Capaldi RA, Gibson BW, Ghosh SS. An alternative strategy to determine the mitochondrial proteome using sucrose gradient fractionation and 1D PAGE on highly purified human heart mitochondria. J Proteome Res. 2002 Sep-Oct; 1(5):451-8. PMID: 12645917.
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    87. Tullius MV, Phillips NJ, Scheffler NK, Samuels NM, Munson Jr RS, Hansen EJ, Stevens-Riley M, Campagnari AA, Gibson BW. The lbgAB gene cluster of Haemophilus ducreyi encodes a beta-1,4-galactosyltransferase and an alpha-1,6-DD-heptosyltransferase involved in lipooligosaccharide biosynthesis. Infect Immun. 2002 Jun; 70(6):2853-61. PMID: 12010972; PMCID: PMC128009.
    88. Schilling B, Gibson BW, Filiatrault M, Campagnari AA. Characterization of lipooligosaccharides from Haemophilus ducreyi containing polylactosamine repeats. J Am Soc Mass Spectrom. 2002 Jun; 13(6):724-34. PMID: 12056572.
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    89. Jones PA, Samuels NM, Phillips NJ, Munson RS, Bozue JA, Arseneau JA, Nichols WA, Zaleski A, Gibson BW, Apicella MA. Haemophilus influenzae type b strain A2 has multiple sialyltransferases involved in lipooligosaccharide sialylation. J Biol Chem. 2002 Apr 26; 277(17):14598-611. PMID: 11842084.
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    90. Post DM, Phillips NJ, Shao JQ, Entz DD, Gibson BW, Apicella MA. Intracellular survival of Neisseria gonorrhoeae in male urethral epithelial cells: importance of a hexaacyl lipid A. Infect Immun. 2002 Feb; 70(2):909-20. PMID: 11796626; PMCID: PMC127693.
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