Bradford Gibson, PhD

Title(s)Professor Emeritus, Pharmaceutical Chemistry
SchoolSchool of Pharmacy
Address401 Parnassus Ave., #246
San Francisco CA 94143
Phone415-476-5320
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    Collapse Biography 
    Collapse Education and Training
    University of California, Santa BarbaraB.A.1975Biochemistry
    Stanford1979Chemistry
    M.I.T.Ph.D.1983Chemistry
    CambridgePostdoctoral1985Chemistry

    Collapse Overview 

    Collapse Research 
    Collapse Research Activities and Funding
    Lysine Acetylation in N. gonorrhoeae Quorum Sensing and Biofilm Formation
    NIH R01AI108255Mar 5, 2014 - Feb 29, 2020
    Role: Co-Principal Investigator
    TripleTOF 5600 High Resolution Mass Spectrometer
    NIH S10OD016281Jun 20, 2013 - Nov 30, 2014
    Role: Principal Investigator
    AB SCIEX QTRAP 5500 LC MS/MS system
    NIH S10RR027953Jul 1, 2010 - Jun 30, 2011
    Role: Principal Investigator
    Mass spectrometry and imaging technologies in Geroscience
    NIH PL1AG032118Sep 30, 2007 - Jun 30, 2013
    Role: Principal Investigator
    QSTAR Elite Quadrupole-o-TOF LC/MS/MS System
    NIH S10RR024615Sep 20, 2007 - Sep 19, 2008
    Role: Principal Investigator
    Basic Mechanisms in Aging and Age Related Disease
    NIH P30AG025708Jul 1, 2005 - Jun 30, 2011
    Role: Co-Investigator
    Mitochondrial Dysfunction in Aging and Disease
    NIH P01AG025901Apr 1, 2005 - Feb 28, 2013
    Role: Co-Investigator
    4000 Q TRAP triple quadrupole/linear ion trap LC/MS/MS
    NIH S10RR021222Apr 1, 2005 - Mar 31, 2006
    Role: Principal Investigator
    Proteomics of Complex 1 Inhibition in GSH-Depleted Cells
    NIH R21NS043620Apr 1, 2003 - Mar 31, 2006
    Role: Principal Investigator
    LCQ-DECA ION-TRAP HPLC/MS SYSTEM
    NIH S10RR014601Sep 1, 2000 - Aug 31, 2001
    Role: Principal Investigator
    Innate immune response to microbial infection
    NIH P01AI044642Sep 30, 1999 - Jul 31, 2015
    Role: Co-Investigator
    Structure and Function of Haemophilus ducreyi LOS
    NIH R01AI031254Sep 1, 1994 - Mar 31, 2008
    Role: Principal Investigator
    Bio-Organic Biomedical Mass Spectrometry Resource
    NIH P41RR001614Mar 1, 1982 - May 31, 2015
    Role: Co-Investigator
    Resource for Biocomputing, Visualization, and Informatics
    NIH/NCRR P41RR001081Jun 1, 1976 - Sep 14, 2012
    Role: Co-Investigator

    Collapse ORNG Applications 
    Collapse Academic Senate

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Magnetic Bead-Based Workflow for Sensitive and Streamlined Cell Surface Proteomics. J Proteome Res. 2024 02 02; 23(2):618-632. Dieters-Castator DZ, Manzanillo P, Yang HY, Modak RV, Rardin MJ, Gibson BW. PMID: 38226771.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    2. Plasma proteomic associations with genetics and health in the UK Biobank. Nature. 2023 Oct; 622(7982):329-338. Sun BB, Chiou J, Traylor M, Benner C, Hsu YH, Richardson TG, Surendran P, Mahajan A, Robins C, Vasquez-Grinnell SG, Hou L, Kvikstad EM, Burren OS, Davitte J, Ferber KL, Gillies CE, Hedman ÅK, Hu S, Lin T, Mikkilineni R, Pendergrass RK, Pickering C, Prins B, Baird D, Chen CY, Ward LD, Deaton AM, Welsh S, Willis CM, Lehner N, Arnold M, Wörheide MA, Suhre K, Kastenmüller G, Sethi A, Cule M, Raj A, Alnylam Human Genetics, AstraZeneca Genomics Initiative, Biogen Biobank Team, Bristol Myers Squibb, Genentech Human Genetics, GlaxoSmithKline Genomic Sciences, Pfizer Integrative Biology, Population Analytics of Janssen Data Sciences, Regeneron Genetics Center, Burkitt-Gray L, Melamud E, Black MH, Fauman EB, Howson JMM, Kang HM, McCarthy MI, Nioi P, Petrovski S, Scott RA, Smith EN, Szalma S, Waterworth DM, Mitnaul LJ, Szustakowski JD, Gibson BW, Miller MR, Whelan CD. PMID: 37794186; PMCID: PMC10567551.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    3. Modeling the CRL4A ligase complex to predict target protein ubiquitination induced by cereblon-recruiting PROTACs. J Biol Chem. 2022 04; 298(4):101653. Bai N, Riching KM, Makaju A, Wu H, Acker TM, Ou SC, Zhang Y, Shen X, Bulloch DN, Rui H, Gibson BW, Daniels DL, Urh M, Rock BM, Humphreys SC. PMID: 35101445; PMCID: PMC9019245.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    4. Identification of Proteolysis Products in Protein Therapeutics through TMPP N-Terminal Tagging and Electron Transfer Dissociation Product Triggered Collisional Induced Dissociation Fragmentation. J Am Soc Mass Spectrom. 2021 Aug 04; 32(8):1936-1944. Bagal D, Gibson BW. PMID: 33534996.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    5. Proteome and Secretome Dynamics of Human Retinal Pigment Epithelium in Response to Reactive Oxygen Species. Sci Rep. 2019 10 28; 9(1):15440. Meyer JG, Garcia TY, Schilling B, Gibson BW, Lamba DA. PMID: 31659173; PMCID: PMC6817852.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    6. Dietary Sugars Alter Hepatic Fatty Acid Oxidation via Transcriptional and Post-translational Modifications of Mitochondrial Proteins. Cell Metab. 2019 10 01; 30(4):735-753.e4. Softic S, Meyer JG, Wang GX, Gupta MK, Batista TM, Lauritzen HPMM, Fujisaka S, Serra D, Herrero L, Willoughby J, Fitzgerald K, Ilkayeva O, Newgard CB, Gibson BW, Schilling B, Cohen DE, Kahn CR. PMID: 31577934; PMCID: PMC7816129.
      View in: PubMed   Mentions: 88     Fields:    Translation:AnimalsCells
    7. SILAC Analysis Reveals Increased Secretion of Hemostasis-Related Factors by Senescent Cells. Cell Rep. 2019 09 24; 28(13):3329-3337.e5. Wiley CD, Liu S, Limbad C, Zawadzka AM, Beck J, Demaria M, Artwood R, Alimirah F, Lopez-Dominguez JA, Kuehnemann C, Danielson SR, Basisty N, Kasler HG, Oron TR, Desprez PY, Mooney SD, Gibson BW, Schilling B, Campisi J, Kapahi P. PMID: 31553904; PMCID: PMC6907691.
      View in: PubMed   Mentions: 62     Fields:    Translation:Humans
    8. JNK modifies neuronal metabolism to promote proteostasis and longevity. Aging Cell. 2019 06; 18(3):e12849. Wang L, Davis SS, Borch Jensen M, Rodriguez-Fernandez IA, Apaydin C, Juhasz G, Gibson BW, Schilling B, Ramanathan A, Ghaemmaghami S, Jasper H. PMID: 30810280; PMCID: PMC6516429.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    9. Temporal dynamics of liver mitochondrial protein acetylation and succinylation and metabolites due to high fat diet and/or excess glucose or fructose. PLoS One. 2018; 13(12):e0208973. Meyer JG, Softic S, Basisty N, Rardin MJ, Verdin E, Gibson BW, Ilkayeva O, Newgard CB, Kahn CR, Schilling B. PMID: 30586434; PMCID: PMC6306174.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    10. Simultaneous Quantification of the Acetylome and Succinylome by 'One-Pot' Affinity Enrichment. Proteomics. 2018 09; 18(17):e1800123. Basisty N, Meyer JG, Wei L, Gibson BW, Schilling B. PMID: 30035354; PMCID: PMC6175148.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    11. The Mitochondrial Acylome Emerges: Proteomics, Regulation by Sirtuins, and Metabolic and Disease Implications. Cell Metab. 2018 03 06; 27(3):497-512. Carrico C, Meyer JG, He W, Gibson BW, Verdin E. PMID: 29514063; PMCID: PMC5863732.
      View in: PubMed   Mentions: 141     Fields:    Translation:HumansAnimalsCells
    12. An acetylatable lysine controls CRP function in E. coli. Mol Microbiol. 2018 Jan; 107(1):116-131. Davis R, Écija-Conesa A, Gallego-Jara J, de Diego T, Filippova EV, Kuffel G, Anderson WF, Gibson BW, Schilling B, Canovas M, Wolfe AJ. PMID: 29105190.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    13. Characterization of Inner and Outer Membrane Proteins from Francisella tularensis Strains LVS and Schu S4 and Identification of Potential Subunit Vaccine Candidates. mBio. 2017 10 10; 8(5). Post DMB, Slütter B, Schilling B, Chande AT, Rasmussen JA, Jones BD, D'Souza AK, Reinders LM, Harty JT, Gibson BW, Apicella MA. PMID: 29018123; PMCID: PMC5635693.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCellsPHPublic Health
    14. Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry. Nat Commun. 2017 08 21; 8(1):291. Collins BC, Hunter CL, Liu Y, Schilling B, Rosenberger G, Bader SL, Chan DW, Gibson BW, Gingras AC, Held JM, Hirayama-Kurogi M, Hou G, Krisp C, Larsen B, Lin L, Liu S, Molloy MP, Moritz RL, Ohtsuki S, Schlapbach R, Selevsek N, Thomas SN, Tzeng SC, Zhang H, Aebersold R. PMID: 28827567; PMCID: PMC5566333.
      View in: PubMed   Mentions: 214     Fields:    Translation:HumansCells
    15. PIQED: automated identification and quantification of protein modifications from DIA-MS data. Nat Methods. 2017 06 29; 14(7):646-647. Meyer JG, Mukkamalla S, Steen H, Nesvizhskii AI, Gibson BW, Schilling B. PMID: 28661500; PMCID: PMC5663633.
      View in: PubMed   Mentions: 18     Fields:    Translation:Cells
    16. Identification and characterization of AckA-dependent protein acetylation in Neisseria gonorrhoeae. PLoS One. 2017; 12(6):e0179621. Post DMB, Schilling B, Reinders LM, D'Souza AK, Ketterer MR, Kiel SJ, Chande AT, Apicella MA, Gibson BW. PMID: 28654654; PMCID: PMC5487020.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    17. Lysine desuccinylase SIRT5 binds to cardiolipin and regulates the electron transport chain. J Biol Chem. 2017 06 16; 292(24):10239-10249. Zhang Y, Bharathi SS, Rardin MJ, Lu J, Maringer KV, Sims-Lucas S, Prochownik EV, Gibson BW, Goetzman ES. PMID: 28458255; PMCID: PMC5473227.
      View in: PubMed   Mentions: 49     Fields:    Translation:HumansAnimalsCells
    18. Generation of High-Quality SWATH® Acquisition Data for Label-free Quantitative Proteomics Studies Using TripleTOF® Mass Spectrometers. Methods Mol Biol. 2017; 1550:223-233. Schilling B, Gibson BW, Hunter CL. PMID: 28188533; PMCID: PMC5669615.
      View in: PubMed   Mentions: 39     Fields:    
    19. Vitamin D Promotes Protein Homeostasis and Longevity via the Stress Response Pathway Genes skn-1, ire-1, and xbp-1. Cell Rep. 2016 10 25; 17(5):1227-1237. Mark KA, Dumas KJ, Bhaumik D, Schilling B, Davis S, Oron TR, Sorensen DJ, Lucanic M, Brem RB, Melov S, Ramanathan A, Gibson BW, Lithgow GJ. PMID: 27783938; PMCID: PMC5689451.
      View in: PubMed   Mentions: 38     Fields:    Translation:AnimalsCells
    20. Quantification of Lysine Acetylation and Succinylation Stoichiometry in Proteins Using Mass Spectrometric Data-Independent Acquisitions (SWATH). J Am Soc Mass Spectrom. 2016 11; 27(11):1758-1771. Meyer JG, D'Souza AK, Sorensen DJ, Rardin MJ, Wolfe AJ, Gibson BW, Schilling B. PMID: 27590315; PMCID: PMC5059418.
      View in: PubMed   Mentions: 37     Fields:    Translation:Cells
    21. Gadd45a Protein Promotes Skeletal Muscle Atrophy by Forming a Complex with the Protein Kinase MEKK4. J Biol Chem. 2016 08 19; 291(34):17496-17509. Bullard SA, Seo S, Schilling B, Dyle MC, Dierdorff JM, Ebert SM, DeLau AD, Gibson BW, Adams CM. PMID: 27358404; PMCID: PMC5016147.
      View in: PubMed   Mentions: 30     Fields:    Translation:AnimalsCells
    22. Comparative Analyses of the Lipooligosaccharides from Nontypeable Haemophilus influenzae and Haemophilus haemolyticus Show Differences in Sialic Acid and Phosphorylcholine Modifications. Infect Immun. 2016 Jan 04; 84(3):765-74. Post DM, Ketterer MR, Coffin JE, Reinders LM, Munson RS, Bair T, Murphy TF, Foster ED, Gibson BW, Apicella MA. PMID: 26729761; PMCID: PMC4771351.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    23. Multiplexed, Scheduled, High-Resolution Parallel Reaction Monitoring on a Full Scan QqTOF Instrument with Integrated Data-Dependent and Targeted Mass Spectrometric Workflows. Anal Chem. 2015 Oct 20; 87(20):10222-9. Schilling B, MacLean B, Held JM, Sahu AK, Rardin MJ, Sorensen DJ, Peters T, Wolfe AJ, Hunter CL, MacCoss MJ, Gibson BW. PMID: 26398777; PMCID: PMC5677521.
      View in: PubMed   Mentions: 41     Fields:    Translation:AnimalsCells
    24. Critical role of acetylation in tau-mediated neurodegeneration and cognitive deficits. Nat Med. 2015 Oct; 21(10):1154-62. Min SW, Chen X, Tracy TE, Li Y, Zhou Y, Wang C, Shirakawa K, Minami SS, Defensor E, Mok SA, Sohn PD, Schilling B, Cong X, Ellerby L, Gibson BW, Johnson J, Krogan N, Shamloo M, Gestwicki J, Masliah E, Verdin E, Gan L. PMID: 26390242; PMCID: PMC4598295.
      View in: PubMed   Mentions: 229     Fields:    Translation:HumansAnimalsCells
    25. Protein acetylation dynamics in response to carbon overflow in Escherichia coli. Mol Microbiol. 2015 Dec; 98(5):847-63. Schilling B, Christensen D, Davis R, Sahu AK, Hu LI, Walker-Peddakotla A, Sorensen DJ, Zemaitaitis B, Gibson BW, Wolfe AJ. PMID: 26264774; PMCID: PMC4715485.
      View in: PubMed   Mentions: 73     Fields:    Translation:Cells
    26. SIRT5 Regulates both Cytosolic and Mitochondrial Protein Malonylation with Glycolysis as a Major Target. Mol Cell. 2015 Jul 16; 59(2):321-32. Nishida Y, Rardin MJ, Carrico C, He W, Sahu AK, Gut P, Najjar R, Fitch M, Hellerstein M, Gibson BW, Verdin E. PMID: 26073543; PMCID: PMC4571487.
      View in: PubMed   Mentions: 195     Fields:    Translation:HumansAnimalsCells
    27. Integration-independent Transgenic Huntington Disease Fragment Mouse Models Reveal Distinct Phenotypes and Life Span in Vivo. J Biol Chem. 2015 Jul 31; 290(31):19287-306. O'Brien R, DeGiacomo F, Holcomb J, Bonner A, Ring KL, Zhang N, Zafar K, Weiss A, Lager B, Schilling B, Gibson BW, Chen S, Kwak S, Ellerby LM. PMID: 26025364; PMCID: PMC4521048.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    28. SIRT1 deacetylates RORγt and enhances Th17 cell generation. J Exp Med. 2015 Jun 01; 212(6):973. Lim HW, Kang SG, Ryu JK, Schilling B, Fei M, Lee IS, Kehasse A, Shirakawa K, Yokoyama M, Schnölzer M, Kasler HG, Kwon HS, Gibson BW, Sato H, Akassoglou K, Xiao C, Littman DR, Ott M, Verdin E. PMID: 25987725; PMCID: PMC4451124.
      View in: PubMed   Mentions: 9     Fields:    
    29. MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments. Mol Cell Proteomics. 2015 Sep; 14(9):2405-19. Rardin MJ, Schilling B, Cheng LY, MacLean BX, Sorensen DJ, Sahu AK, MacCoss MJ, Vitek O, Gibson BW. PMID: 25987414; PMCID: PMC4563724.
      View in: PubMed   Mentions: 29     Fields:    Translation:Animals
    30. SIRT1 deacetylates RORγt and enhances Th17 cell generation. J Exp Med. 2015 May 04; 212(5):607-17. Lim HW, Kang SG, Ryu JK, Schilling B, Fei M, Lee IS, Kehasse A, Shirakawa K, Yokoyama M, Schnölzer M, Kasler HG, Kwon HS, Gibson BW, Sato H, Akassoglou K, Xiao C, Littman DR, Ott M, Verdin E. PMID: 25918343; PMCID: PMC4419343.
      View in: PubMed   Mentions: 78     Fields:    Translation:AnimalsCells
    31. SIRT3 and SIRT5 regulate the enzyme activity and cardiolipin binding of very long-chain acyl-CoA dehydrogenase. PLoS One. 2015; 10(3):e0122297. Zhang Y, Bharathi SS, Rardin MJ, Uppala R, Verdin E, Gibson BW, Goetzman ES. PMID: 25811481; PMCID: PMC4374878.
      View in: PubMed   Mentions: 49     Fields:    Translation:AnimalsCells
    32. Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma. Mol Cell Proteomics. 2015 Sep; 14(9):2357-74. Abbatiello SE, Schilling B, Mani DR, Zimmerman LJ, Hall SC, MacLean B, Albertolle M, Allen S, Burgess M, Cusack MP, Gosh M, Hedrick V, Held JM, Inerowicz HD, Jackson A, Keshishian H, Kinsinger CR, Lyssand J, Makowski L, Mesri M, Rodriguez H, Rudnick P, Sadowski P, Sedransk N, Shaddox K, Skates SJ, Kuhn E, Smith D, Whiteaker JR, Whitwell C, Zhang S, Borchers CH, Fisher SJ, Gibson BW, Liebler DC, MacCoss MJ, Neubert TA, Paulovich AG, Regnier FE, Tempst P, Carr SA. PMID: 25693799; PMCID: PMC4563721.
      View in: PubMed   Mentions: 67     Fields:    Translation:Humans
    33. Comparative analyses of proteins from Haemophilus influenzae biofilm and planktonic populations using metabolic labeling and mass spectrometry. BMC Microbiol. 2014 Dec 31; 14:329. Post DM, Held JM, Ketterer MR, Phillips NJ, Sahu A, Apicella MA, Gibson BW. PMID: 25551439; PMCID: PMC4302520.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    34. Wavelet-based peak detection and a new charge inference procedure for MS/MS implemented in ProteoWizard's msConvert. J Proteome Res. 2015 Feb 06; 14(2):1299-307. French WR, Zimmerman LJ, Schilling B, Gibson BW, Miller CA, Townsend RR, Sherrod SD, Goodwin CR, McLean JA, Tabb DL. PMID: 25411686; PMCID: PMC4324452.
      View in: PubMed   Mentions: 15     Fields:    
    35. The E. coli sirtuin CobB shows no preference for enzymatic and nonenzymatic lysine acetylation substrate sites. Microbiologyopen. 2015 Feb; 4(1):66-83. AbouElfetouh A, Kuhn ML, Hu LI, Scholle MD, Sorensen DJ, Sahu AK, Becher D, Antelmann H, Mrksich M, Anderson WF, Gibson BW, Schilling B, Wolfe AJ. PMID: 25417765; PMCID: PMC4335977.
      View in: PubMed   Mentions: 46     Fields:    Translation:Cells
    36. Iron promotes protein insolubility and aging in C. elegans. Aging (Albany NY). 2014 Nov; 6(11):975-91. Klang IM, Schilling B, Sorensen DJ, Sahu AK, Kapahi P, Andersen JK, Swoboda P, Killilea DW, Gibson BW, Lithgow GJ. PMID: 25554795; PMCID: PMC4276790.
      View in: PubMed   Mentions: 31     Fields:    Translation:Animals
    37. Panorama: a targeted proteomics knowledge base. J Proteome Res. 2014 Sep 05; 13(9):4205-10. Sharma V, Eckels J, Taylor GK, Shulman NJ, Stergachis AB, Joyner SA, Yan P, Whiteaker JR, Halusa GN, Schilling B, Gibson BW, Colangelo CM, Paulovich AG, Carr SA, Jaffe JD, MacCoss MJ, MacLean B. PMID: 25102069; PMCID: PMC4156235.
      View in: PubMed   Mentions: 109     Fields:    
    38. RPL24: a potential therapeutic target whose depletion or acetylation inhibits polysome assembly and cancer cell growth. Oncotarget. 2014 Jul 15; 5(13):5165-76. Wilson-Edell KA, Kehasse A, Scott GK, Yau C, Rothschild DE, Schilling B, Gabriel BS, Yevtushenko MA, Hanson IM, Held JM, Gibson BW, Benz CC. PMID: 24970821; PMCID: PMC4148130.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    39. Variation and quantification among a target set of phosphopeptides in human plasma by multiple reaction monitoring and SWATH-MS2 data-independent acquisition. Electrophoresis. 2014 Dec; 35(24):3487-97. Zawadzka AM, Schilling B, Held JM, Sahu AK, Cusack MP, Drake PM, Fisher SJ, Gibson BW. PMID: 24853916; PMCID: PMC4565165.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    40. A framework for installable external tools in Skyline. Bioinformatics. 2014 Sep 01; 30(17):2521-3. Broudy D, Killeen T, Choi M, Shulman N, Mani DR, Abbatiello SE, Mani D, Ahmad R, Sahu AK, Schilling B, Tamura K, Boss Y, Sharma V, Gibson BW, Carr SA, Vitek O, MacCoss MJ, MacLean B. PMID: 24813211; PMCID: PMC4147880.
      View in: PubMed   Mentions: 16     Fields:    
    41. Structural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylation. PLoS One. 2014; 9(4):e94816. Kuhn ML, Zemaitaitis B, Hu LI, Sahu A, Sorensen D, Minasov G, Lima BP, Scholle M, Mrksich M, Anderson WF, Gibson BW, Schilling B, Wolfe AJ. PMID: 24756028; PMCID: PMC3995681.
      View in: PubMed   Mentions: 130     Fields:    Translation:Cells
    42. Phosphoprotein secretome of tumor cells as a source of candidates for breast cancer biomarkers in plasma. Mol Cell Proteomics. 2014 Apr; 13(4):1034-49. Zawadzka AM, Schilling B, Cusack MP, Sahu AK, Drake P, Fisher SJ, Benz CC, Gibson BW. PMID: 24505115; PMCID: PMC3977182.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    43. Francisella tularensis Schu S4 lipopolysaccharide core sugar and O-antigen mutants are attenuated in a mouse model of tularemia. Infect Immun. 2014 Apr; 82(4):1523-39. Rasmussen JA, Post DM, Gibson BW, Lindemann SR, Apicella MA, Meyerholz DK, Jones BD. PMID: 24452684; PMCID: PMC3993386.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    44. SIRT5 regulates the mitochondrial lysine succinylome and metabolic networks. Cell Metab. 2013 Dec 03; 18(6):920-33. Rardin MJ, He W, Nishida Y, Newman JC, Carrico C, Danielson SR, Guo A, Gut P, Sahu AK, Li B, Uppala R, Fitch M, Riiff T, Zhu L, Zhou J, Mulhern D, Stevens RD, Ilkayeva OR, Newgard CB, Jacobson MP, Hellerstein M, Goetzman ES, Gibson BW, Verdin E. PMID: 24315375; PMCID: PMC4105152.
      View in: PubMed   Mentions: 319     Fields:    Translation:HumansAnimalsCells
    45. Sirtuin 3 (SIRT3) protein regulates long-chain acyl-CoA dehydrogenase by deacetylating conserved lysines near the active site. J Biol Chem. 2013 Nov 22; 288(47):33837-33847. Bharathi SS, Zhang Y, Mohsen AW, Uppala R, Balasubramani M, Schreiber E, Uechi G, Beck ME, Rardin MJ, Vockley J, Verdin E, Gibson BW, Hirschey MD, Goetzman ES. PMID: 24121500; PMCID: PMC3837126.
      View in: PubMed   Mentions: 87     Fields:    Translation:HumansAnimalsCells
    46. Sirt3 regulates metabolic flexibility of skeletal muscle through reversible enzymatic deacetylation. Diabetes. 2013 Oct; 62(10):3404-17. Jing E, O'Neill BT, Rardin MJ, Kleinridders A, Ilkeyeva OR, Ussar S, Bain JR, Lee KY, Verdin EM, Newgard CB, Gibson BW, Kahn CR. PMID: 23835326; PMCID: PMC3781465.
      View in: PubMed   Mentions: 128     Fields:    Translation:AnimalsCells
    47. Site-specific acylation changes in the lipid A of Escherichia coli lpxL mutants grown at high temperatures. Innate Immun. 2014 Apr; 20(3):269-82. Schilling B, Hunt J, Gibson BW, Apicella MA. PMID: 23812252; PMCID: PMC3983921.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    48. Design, implementation and multisite evaluation of a system suitability protocol for the quantitative assessment of instrument performance in liquid chromatography-multiple reaction monitoring-MS (LC-MRM-MS). Mol Cell Proteomics. 2013 Sep; 12(9):2623-39. Abbatiello SE, Mani DR, Schilling B, Maclean B, Zimmerman LJ, Feng X, Cusack MP, Sedransk N, Hall SC, Addona T, Allen S, Dodder NG, Ghosh M, Held JM, Hedrick V, Inerowicz HD, Jackson A, Keshishian H, Kim JW, Lyssand JS, Riley CP, Rudnick P, Sadowski P, Shaddox K, Smith D, Tomazela D, Wahlander A, Waldemarson S, Whitwell CA, You J, Zhang S, Kinsinger CR, Mesri M, Rodriguez H, Borchers CH, Buck C, Fisher SJ, Gibson BW, Liebler D, Maccoss M, Neubert TA, Paulovich A, Regnier F, Skates SJ, Tempst P, Wang M, Carr SA. PMID: 23689285; PMCID: PMC3769335.
      View in: PubMed   Mentions: 48     Fields:    Translation:AnimalsCells
    49. Label-Free Quantitation and Mapping of the ErbB2 Tumor Receptor by Multiple Protease Digestion with Data-Dependent (MS1) and Data-Independent (MS2) Acquisitions. Int J Proteomics. 2013; 2013:791985. Held JM, Schilling B, D'Souza AK, Srinivasan T, Behring JB, Sorensen DJ, Benz CC, Gibson BW. PMID: 23710360; PMCID: PMC3654371.
      View in: PubMed   Mentions: 7  
    50. Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways. Proc Natl Acad Sci U S A. 2013 Apr 16; 110(16):6601-6. Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW. PMID: 23576753; PMCID: PMC3631688.
      View in: PubMed   Mentions: 229     Fields:    Translation:AnimalsCells
    51. Targeted quantitation of acetylated lysine peptides by selected reaction monitoring mass spectrometry. Methods Mol Biol. 2013; 1077:121-31. Rardin MJ, Held JM, Gibson BW. PMID: 24014403; PMCID: PMC4378680.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    52. Elucidation of N-glycosites within human plasma glycoproteins for cancer biomarker discovery. Methods Mol Biol. 2013; 951:307-22. Drake P, Schilling B, Gibson B, Fisher S. PMID: 23296540.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    53. No consistent bioenergetic defects in presynaptic nerve terminals isolated from mouse models of Alzheimer's disease. J Neurosci. 2012 Nov 21; 32(47):16775-84. Choi SW, Gerencser AA, Ng R, Flynn JM, Melov S, Danielson SR, Gibson BW, Nicholls DG, Bredesen DE, Brand MD. PMID: 23175831; PMCID: PMC3736741.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    54. Adipose-specific deletion of TFAM increases mitochondrial oxidation and protects mice against obesity and insulin resistance. Cell Metab. 2012 Dec 05; 16(6):765-76. Vernochet C, Mourier A, Bezy O, Macotela Y, Boucher J, Rardin MJ, An D, Lee KY, Ilkayeva OR, Zingaretti CM, Emanuelli B, Smyth G, Cinti S, Newgard CB, Gibson BW, Larsson NG, Kahn CR. PMID: 23168219; PMCID: PMC3529641.
      View in: PubMed   Mentions: 125     Fields:    Translation:AnimalsCells
    55. Tor1 regulates protein solubility in Saccharomyces cerevisiae. Mol Biol Cell. 2012 Dec; 23(24):4679-88. Peters TW, Rardin MJ, Czerwieniec G, Evani US, Reis-Rodrigues P, Lithgow GJ, Mooney SD, Gibson BW, Hughes RE. PMID: 23097491; PMCID: PMC3521677.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    56. Proteogenomics of synaptosomal mitochondrial oxidative stress. Free Radic Biol Med. 2012 Sep 01; 53(5):1048-60. Flynn JM, Czerwieniec GA, Choi SW, Day NU, Gibson BW, Hubbard A, Melov S. PMID: 22796328; PMCID: PMC3436120.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    57. QuaMeter: multivendor performance metrics for LC-MS/MS proteomics instrumentation. Anal Chem. 2012 Jul 17; 84(14):5845-50. Ma ZQ, Polzin KO, Dasari S, Chambers MC, Schilling B, Gibson BW, Tran BQ, Vega-Montoto L, Liebler DC, Tabb DL. PMID: 22697456; PMCID: PMC3730131.
      View in: PubMed   Mentions: 22     Fields:    
    58. Proteomic analysis of Neisseria gonorrhoeae biofilms shows shift to anaerobic respiration and changes in nutrient transport and outermembrane proteins. PLoS One. 2012; 7(6):e38303. Phillips NJ, Steichen CT, Schilling B, Post DM, Niles RK, Bair TB, Falsetta ML, Apicella MA, Gibson BW. PMID: 22701624; PMCID: PMC3368942.
      View in: PubMed   Mentions: 34     Fields:    Translation:Cells
    59. Ligand binding promotes CDK-dependent phosphorylation of ER-alpha on hinge serine 294 but inhibits ligand-independent phosphorylation of serine 305. Mol Cancer Res. 2012 Aug; 10(8):1120-32. Held JM, Britton DJ, Scott GK, Lee EL, Schilling B, Baldwin MA, Gibson BW, Benz CC. PMID: 22669764; PMCID: PMC3950940.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    60. Ubiquitin-specific peptidase 9, X-linked (USP9X) modulates activity of mammalian target of rapamycin (mTOR). J Biol Chem. 2012 Jun 15; 287(25):21164-75. Agrawal P, Chen YT, Schilling B, Gibson BW, Hughes RE. PMID: 22544753; PMCID: PMC3375539.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansAnimalsCells
    61. Inhibition of lipid signaling enzyme diacylglycerol kinase epsilon attenuates mutant huntingtin toxicity. J Biol Chem. 2012 Jun 15; 287(25):21204-13. Zhang N, Li B, Al-Ramahi I, Cong X, Held JM, Kim E, Botas J, Gibson BW, Ellerby LM. PMID: 22511757; PMCID: PMC3375542.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsCells
    62. Platform-independent and label-free quantitation of proteomic data using MS1 extracted ion chromatograms in skyline: application to protein acetylation and phosphorylation. Mol Cell Proteomics. 2012 May; 11(5):202-14. Schilling B, Rardin MJ, MacLean BX, Zawadzka AM, Frewen BE, Cusack MP, Sorensen DJ, Bereman MS, Jing E, Wu CC, Verdin E, Kahn CR, Maccoss MJ, Gibson BW. PMID: 22454539; PMCID: PMC3418851.
      View in: PubMed   Mentions: 237     Fields:    Translation:HumansAnimalsCells
    63. Lectin chromatography/mass spectrometry discovery workflow identifies putative biomarkers of aggressive breast cancers. J Proteome Res. 2012 Apr 06; 11(4):2508-20. Drake PM, Schilling B, Niles RK, Prakobphol A, Li B, Jung K, Cho W, Braten M, Inerowicz HD, Williams K, Albertolle M, Held JM, Iacovides D, Sorensen DJ, Griffith OL, Johansen E, Zawadzka AM, Cusack MP, Allen S, Gormley M, Hall SC, Witkowska HE, Gray JW, Regnier F, Gibson BW, Fisher SJ. PMID: 22309216; PMCID: PMC3383053.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    64. O-antigen and core carbohydrate of Vibrio fischeri lipopolysaccharide: composition and analysis of their role in Euprymna scolopes light organ colonization. J Biol Chem. 2012 Mar 09; 287(11):8515-30. Post DM, Yu L, Krasity BC, Choudhury B, Mandel MJ, Brennan CA, Ruby EG, McFall-Ngai MJ, Gibson BW, Apicella MA. PMID: 22247546; PMCID: PMC3318738.
      View in: PubMed   Mentions: 38     Fields:    Translation:AnimalsCells
    65. Proteomic analysis of age-dependent changes in protein solubility identifies genes that modulate lifespan. Aging Cell. 2012 Feb; 11(1):120-7. Reis-Rodrigues P, Czerwieniec G, Peters TW, Evani US, Alavez S, Gaman EA, Vantipalli M, Mooney SD, Gibson BW, Lithgow GJ, Hughes RE. PMID: 22103665; PMCID: PMC3437485.
      View in: PubMed   Mentions: 99     Fields:    Translation:HumansAnimals
    66. Regulatory control or oxidative damage? Proteomic approaches to interrogate the role of cysteine oxidation status in biological processes. Mol Cell Proteomics. 2012 Apr; 11(4):R111.013037. Held JM, Gibson BW. PMID: 22159599; PMCID: PMC3322581.
      View in: PubMed   Mentions: 50     Fields:    Translation:AnimalsCells
    67. Life span extension via eIF4G inhibition is mediated by posttranscriptional remodeling of stress response gene expression in C. elegans. Cell Metab. 2011 Jul 06; 14(1):55-66. Rogers AN, Chen D, McColl G, Czerwieniec G, Felkey K, Gibson BW, Hubbard A, Melov S, Lithgow GJ, Kapahi P. PMID: 21723504; PMCID: PMC3220185.
      View in: PubMed   Mentions: 78     Fields:    Translation:AnimalsCells
    68. Mass spectrometric identification of novel lysine acetylation sites in huntingtin. Mol Cell Proteomics. 2011 Oct; 10(10):M111.009829. Cong X, Held JM, DeGiacomo F, Bonner A, Chen JM, Schilling B, Czerwieniec GA, Gibson BW, Ellerby LM. PMID: 21685499; PMCID: PMC3205870.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansAnimalsCells
    69. N-acylethanolamine signalling mediates the effect of diet on lifespan in Caenorhabditis elegans. Nature. 2011 May 12; 473(7346):226-9. Lucanic M, Held JM, Vantipalli MC, Klang IM, Graham JB, Gibson BW, Lithgow GJ, Gill MS. PMID: 21562563; PMCID: PMC3093655.
      View in: PubMed   Mentions: 74     Fields:    Translation:AnimalsCells
    70. The lipid A from Vibrio fischeri lipopolysaccharide: a unique structure bearing a phosphoglycerol moiety. J Biol Chem. 2011 Jun 17; 286(24):21203-19. Phillips NJ, Adin DM, Stabb EV, McFall-Ngai MJ, Apicella MA, Gibson BW. PMID: 21498521; PMCID: PMC3122182.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    71. Confident identification of 3-nitrotyrosine modifications in mass spectral data across multiple mass spectrometry platforms. J Proteomics. 2011 Oct 19; 74(11):2510-21. Li B, Held JM, Schilling B, Danielson SR, Gibson BW. PMID: 21514405; PMCID: PMC3191283.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    72. Quantitative mapping of reversible mitochondrial Complex I cysteine oxidation in a Parkinson disease mouse model. J Biol Chem. 2011 Mar 04; 286(9):7601-8. Danielson SR, Held JM, Oo M, Riley R, Gibson BW, Andersen JK. PMID: 21196577; PMCID: PMC3045014.
      View in: PubMed   Mentions: 32     Fields:    Translation:AnimalsCells
    73. Identification of new modulators and protein alterations in non-apoptotic programmed cell death. J Cell Biochem. 2010 Dec 15; 111(6):1401-12. Sperandio S, Poksay KS, Schilling B, Crippen D, Gibson BW, Bredesen DE. PMID: 20830744; PMCID: PMC5668132.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansCells
    74. A lectin affinity workflow targeting glycosite-specific, cancer-related carbohydrate structures in trypsin-digested human plasma. Anal Biochem. 2011 Jan 01; 408(1):71-85. Drake PM, Schilling B, Niles RK, Braten M, Johansen E, Liu H, Lerch M, Sorensen DJ, Li B, Allen S, Hall SC, Witkowska HE, Regnier FE, Gibson BW, Fisher SJ. PMID: 20705048; PMCID: PMC3205961.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    75. Identification, characterization and immunogenicity of an O-antigen capsular polysaccharide of Francisella tularensis. PLoS One. 2010 Jul 06; 5(7):e11060. Apicella MA, Post DM, Fowler AC, Jones BD, Rasmussen JA, Hunt JR, Imagawa S, Choudhury B, Inzana TJ, Maier TM, Frank DW, Zahrt TC, Chaloner K, Jennings MP, McLendon MK, Gibson BW. PMID: 20625403; PMCID: PMC2897883.
      View in: PubMed   Mentions: 55     Fields:    Translation:AnimalsCells
    76. ErbB2 trafficking and degradation associated with K48 and K63 polyubiquitination. Cancer Res. 2010 May 01; 70(9):3709-17. Marx C, Held JM, Gibson BW, Benz CC. PMID: 20406983; PMCID: PMC2862137.
      View in: PubMed   Mentions: 62     Fields:    Translation:HumansCells
    77. Targeted quantitation of site-specific cysteine oxidation in endogenous proteins using a differential alkylation and multiple reaction monitoring mass spectrometry approach. Mol Cell Proteomics. 2010 Jul; 9(7):1400-10. Held JM, Danielson SR, Behring JB, Atsriku C, Britton DJ, Puckett RL, Schilling B, Campisi J, Benz CC, Gibson BW. PMID: 20233844; PMCID: PMC2938085.
      View in: PubMed   Mentions: 62     Fields:    Translation:HumansCells
    78. Utilizing the O-antigen lipopolysaccharide biosynthesis pathway in Escherichia coli to interrogate the substrate specificities of exogenous glycosyltransferase genes in a combinatorial approach. Glycobiology. 2010 Jun; 20(6):763-74. Johansen EB, Szoka FC, Zaleski A, Apicella MA, Gibson BW. PMID: 20208062; PMCID: PMC2900885.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    79. Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry. J Proteome Res. 2010 Feb 05; 9(2):761-76. Tabb DL, Vega-Montoto L, Rudnick PA, Variyath AM, Ham AJ, Bunk DM, Kilpatrick LE, Billheimer DD, Blackman RK, Cardasis HL, Carr SA, Clauser KR, Jaffe JD, Kowalski KA, Neubert TA, Regnier FE, Schilling B, Tegeler TJ, Wang M, Wang P, Whiteaker JR, Zimmerman LJ, Fisher SJ, Gibson BW, Kinsinger CR, Mesri M, Rodriguez H, Stein SE, Tempst P, Paulovich AG, Liebler DC, Spiegelman C. PMID: 19921851; PMCID: PMC2818771.
      View in: PubMed   Mentions: 238     Fields:    
    80. Sweetening the pot: adding glycosylation to the biomarker discovery equation. Clin Chem. 2010 Feb; 56(2):223-36. Drake PM, Cho W, Li B, Prakobphol A, Johansen E, Anderson NL, Regnier FE, Gibson BW, Fisher SJ. PMID: 19959616; PMCID: PMC2849286.
      View in: PubMed   Mentions: 132     Fields:    Translation:HumansCells
    81. Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance. Mol Cell Proteomics. 2010 Feb; 9(2):242-54. Paulovich AG, Billheimer D, Ham AJ, Vega-Montoto L, Rudnick PA, Tabb DL, Wang P, Blackman RK, Bunk DM, Cardasis HL, Clauser KR, Kinsinger CR, Schilling B, Tegeler TJ, Variyath AM, Wang M, Whiteaker JR, Zimmerman LJ, Fenyo D, Carr SA, Fisher SJ, Gibson BW, Mesri M, Neubert TA, Regnier FE, Rodriguez H, Spiegelman C, Stein SE, Tempst P, Liebler DC. PMID: 19858499; PMCID: PMC2830837.
      View in: PubMed   Mentions: 70     Fields:    Translation:HumansAnimals
    82. Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses. Mol Cell Proteomics. 2010 Feb; 9(2):225-41. Rudnick PA, Clauser KR, Kilpatrick LE, Tchekhovskoi DV, Neta P, Blonder N, Billheimer DD, Blackman RK, Bunk DM, Cardasis HL, Ham AJ, Jaffe JD, Kinsinger CR, Mesri M, Neubert TA, Schilling B, Tabb DL, Tegeler TJ, Vega-Montoto L, Variyath AM, Wang M, Wang P, Whiteaker JR, Zimmerman LJ, Carr SA, Fisher SJ, Gibson BW, Paulovich AG, Regnier FE, Rodriguez H, Spiegelman C, Tempst P, Liebler DC, Stein SE. PMID: 19837981; PMCID: PMC2830836.
      View in: PubMed   Mentions: 80     Fields:    Translation:Animals
    83. The Mycobacterium bovis bacille Calmette-Guerin phagosome proteome. Mol Cell Proteomics. 2010 Jan; 9(1):32-53. Lee BY, Jethwaney D, Schilling B, Clemens DL, Gibson BW, Horwitz MA. PMID: 19815536; PMCID: PMC2808266.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    84. A lectin HPLC method to enrich selectively-glycosylated peptides from complex biological samples. J Vis Exp. 2009 Oct 01; (32). Johansen E, Schilling B, Lerch M, Niles RK, Liu H, Li B, Allen S, Hall SC, Witkowska HE, Regnier FE, Gibson BW, Fisher SJ, Drake PM. PMID: 19798022; PMCID: PMC2762330.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    85. Preferentially increased nitration of alpha-synuclein at tyrosine-39 in a cellular oxidative model of Parkinson's disease. Anal Chem. 2009 Sep 15; 81(18):7823-8. Danielson SR, Held JM, Schilling B, Oo M, Gibson BW, Andersen JK. PMID: 19697948; PMCID: PMC2748813.
      View in: PubMed   Mentions: 50     Fields:    Translation:AnimalsCells
    86. IDPicker 2.0: Improved protein assembly with high discrimination peptide identification filtering. J Proteome Res. 2009 Aug; 8(8):3872-81. Ma ZQ, Dasari S, Chambers MC, Litton MD, Sobecki SM, Zimmerman LJ, Halvey PJ, Schilling B, Drake PM, Gibson BW, Tabb DL. PMID: 19522537; PMCID: PMC2810655.
      View in: PubMed   Mentions: 199     Fields:    Translation:HumansCells
    87. Calpain-1 cleaves and activates caspase-7. J Biol Chem. 2009 Sep 11; 284(37):25441-9. Gafni J, Cong X, Chen SF, Gibson BW, Ellerby LM. PMID: 19617626; PMCID: PMC2757245.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    88. Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma. Nat Biotechnol. 2009 Jul; 27(7):633-41. Addona TA, Abbatiello SE, Schilling B, Skates SJ, Mani DR, Bunk DM, Spiegelman CH, Zimmerman LJ, Ham AJ, Keshishian H, Hall SC, Allen S, Blackman RK, Borchers CH, Buck C, Cardasis HL, Cusack MP, Dodder NG, Gibson BW, Held JM, Hiltke T, Jackson A, Johansen EB, Kinsinger CR, Li J, Mesri M, Neubert TA, Niles RK, Pulsipher TC, Ransohoff D, Rodriguez H, Rudnick PA, Smith D, Tabb DL, Tegeler TJ, Variyath AM, Vega-Montoto LJ, Wahlander A, Waldemarson S, Wang M, Whiteaker JR, Zhao L, Anderson NL, Fisher SJ, Liebler DC, Paulovich AG, Regnier FE, Tempst P, Carr SA. PMID: 19561596; PMCID: PMC2855883.
      View in: PubMed   Mentions: 424     Fields:    Translation:Humans
    89. Systematic mapping of posttranslational modifications in human estrogen receptor-alpha with emphasis on novel phosphorylation sites. Mol Cell Proteomics. 2009 Mar; 8(3):467-80. Atsriku C, Britton DJ, Held JM, Schilling B, Scott GK, Gibson BW, Benz CC, Baldwin MA. PMID: 18984578; PMCID: PMC2649810.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansCells
    90. A novel serine phosphorylation site detected in the N-terminal domain of estrogen receptor isolated from human breast cancer cells. J Am Soc Mass Spectrom. 2008 May; 19(5):729-40. Britton DJ, Scott GK, Schilling B, Atsriku C, Held JM, Gibson BW, Benz CC, Baldwin MA. PMID: 18367407; PMCID: PMC7456516.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    91. Partial acetylation of lysine residues improves intraprotein cross-linking. Anal Chem. 2008 Feb 15; 80(4):951-60. Guo X, Bandyopadhyay P, Schilling B, Young MM, Fujii N, Aynechi T, Guy RK, Kuntz ID, Gibson BW. PMID: 18201069.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    92. Characterization of htrB and msbB mutants of the light organ symbiont Vibrio fischeri. Appl Environ Microbiol. 2008 Feb; 74(3):633-44. Adin DM, Phillips NJ, Gibson BW, Apicella MA, Ruby EG, McFall-Ngai MJ, Hall DB, Stabb EV. PMID: 18065606; PMCID: PMC2227739.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    93. Small-scale immunopurification of cytochrome c oxidase for a high-throughput multiplexing analysis of enzyme activity and amount. Biotechnol Appl Biochem. 2007 Dec; 48(Pt 4):167-78. Murray J, Schilling B, Row RH, Yoo CB, Gibson BW, Marusich MF, Capaldi RA. PMID: 17508937.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    94. Characterization of the N-acetyl-5-neuraminic acid-binding site of the extracytoplasmic solute receptor (SiaP) of nontypeable Haemophilus influenzae strain 2019. J Biol Chem. 2008 Jan 11; 283(2):855-65. Johnston JW, Coussens NP, Allen S, Houtman JC, Turner KH, Zaleski A, Ramaswamy S, Gibson BW, Apicella MA. PMID: 17947229.
      View in: PubMed   Mentions: 43     Fields:    Translation:Cells
    95. Regulation of sialic acid transport and catabolism in Haemophilus influenzae. Mol Microbiol. 2007 Oct; 66(1):26-39. Johnston JW, Zaleski A, Allen S, Mootz JM, Armbruster D, Gibson BW, Apicella MA, Munson RS. PMID: 17880422.
      View in: PubMed   Mentions: 37     Fields:    Translation:Cells
    96. Proposed second class of Haemophilus ducreyi strains show altered protein and lipooligosaccharide profiles. Proteomics. 2007 Sep; 7(17):3131-42. Post DM, Gibson BW. PMID: 17676659.
      View in: PubMed   Mentions: 16     Fields:    Translation:Cells
    97. Identification of LpxL, a late acyltransferase of Francisella tularensis. Infect Immun. 2007 Nov; 75(11):5518-31. McLendon MK, Schilling B, Hunt JR, Apicella MA, Gibson BW. PMID: 17724076; PMCID: PMC2168286.
      View in: PubMed   Mentions: 14     Fields:    Translation:Cells
    98. Proteomic analysis of plasma membrane and secretory vesicles from human neutrophils. Proteome Sci. 2007 Aug 10; 5:12. Jethwaney D, Islam MR, Leidal KG, de Bernabe DB, Campbell KP, Nauseef WM, Gibson BW. PMID: 17692124; PMCID: PMC2075486.
      View in: PubMed   Mentions: 29  
    99. Quantification of cysteine oxidation in human estrogen receptor by mass spectrometry. Anal Chem. 2007 Apr 15; 79(8):3083-90. Atsriku C, Benz CC, Scott GK, Gibson BW, Baldwin MA. PMID: 17373775; PMCID: PMC2536661.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    100. Characterization of lipid A acylation patterns in Francisella tularensis, Francisella novicida, and Francisella philomiragia using multiple-stage mass spectrometry and matrix-assisted laser desorption/ionization on an intermediate vacuum source linear ion trap. Anal Chem. 2007 Feb 01; 79(3):1034-42. Schilling B, McLendon MK, Phillips NJ, Apicella MA, Gibson BW. PMID: 17263332; PMCID: PMC2556175.
      View in: PubMed   Mentions: 31     Fields:    Translation:Cells
    101. Identification of genes involved in the expression of atypical lipooligosaccharide structures from a second class of Haemophilus ducreyi. Infect Immun. 2007 Jan; 75(1):113-21. Post DM, Munson RS, Baker B, Zhong H, Bozue JA, Gibson BW. PMID: 17030566; PMCID: PMC1828386.
      View in: PubMed   Mentions: 14     Fields:    Translation:Cells
    102. Role of lgtC in resistance of nontypeable Haemophilus influenzae strain R2866 to human serum. Infect Immun. 2006 Nov; 74(11):6226-35. Erwin AL, Allen S, Ho DK, Bonthuis PJ, Bonthius PJ, Jarisch J, Nelson KL, Tsao DL, Unrath WC, Watson ME, Gibson BW, Apicella MA, Smith AL. PMID: 16966407; PMCID: PMC1695526.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    103. DAF-12-dependent rescue of dauer formation in Caenorhabditis elegans by (25S)-cholestenoic acid. Aging Cell. 2006 Aug; 5(4):283-91. Held JM, White MP, Fisher AL, Gibson BW, Lithgow GJ, Gill MS. PMID: 16913876.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansAnimalsCells
    104. Huntingtin phosphorylation sites mapped by mass spectrometry. Modulation of cleavage and toxicity. J Biol Chem. 2006 Aug 18; 281(33):23686-97. Schilling B, Gafni J, Torcassi C, Cong X, Row RH, LaFevre-Bernt MA, Cusack MP, Ratovitski T, Hirschhorn R, Ross CA, Gibson BW, Ellerby LM. PMID: 16782707.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansAnimalsCells
    105. Novel pathways associated with quinone-induced stress in breast cancer cells. Drug Metab Rev. 2006; 38(4):601-13. Benz CC, Atsriku C, Yau C, Britton D, Schilling B, Gibson BW, Baldwin MA, Scott GK. PMID: 17145690.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    106. Stable isotope metabolic labeling of Neisseria meningitidis lipooligosaccharide. J Endotoxin Res. 2006; 12(2):93-8. Post DM, Zhang D, Weiss JP, Gibson BW. PMID: 16690012.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    107. Identification of a novel sialic acid transporter in Haemophilus ducreyi. Infect Immun. 2005 Oct; 73(10):6727-35. Post DM, Mungur R, Gibson BW, Munson RS. PMID: 16177350; PMCID: PMC1230923.
      View in: PubMed   Mentions: 25     Fields:    Translation:Cells
    108. Novel sialic acid transporter of Haemophilus influenzae. Infect Immun. 2005 Sep; 73(9):5291-300. Allen S, Zaleski A, Johnston JW, Gibson BW, Apicella MA. PMID: 16113244; PMCID: PMC1231074.
      View in: PubMed   Mentions: 54     Fields:    Translation:Cells
    109. Biochemical and functional characterization of membrane blebs purified from Neisseria meningitidis serogroup B. J Biol Chem. 2005 Nov 18; 280(46):38383-94. Post DM, Zhang D, Eastvold JS, Teghanemt A, Gibson BW, Weiss JP. PMID: 16103114.
      View in: PubMed   Mentions: 53     Fields:    Translation:HumansCells
    110. Proteomic analysis of succinate dehydrogenase and ubiquinol-cytochrome c reductase (Complex II and III) isolated by immunoprecipitation from bovine and mouse heart mitochondria. Biochim Biophys Acta. 2006 Feb; 1762(2):213-22. Schilling B, Murray J, Yoo CB, Row RH, Cusack MP, Capaldi RA, Gibson BW. PMID: 16120479.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    111. Characterization of a cluster of three glycosyltransferase enzymes essential for Moraxella catarrhalis lipooligosaccharide assembly. J Bacteriol. 2005 May; 187(9):2939-47. Edwards KJ, Allen S, Gibson BW, Campagnari AA. PMID: 15838019; PMCID: PMC1082826.
      View in: PubMed   Mentions: 15     Fields:    Translation:Cells
    112. Mass spectrometric identification of a novel phosphorylation site in subunit NDUFA10 of bovine mitochondrial complex I. FEBS Lett. 2005 Apr 25; 579(11):2485-90. Schilling B, Aggeler R, Schulenberg B, Murray J, Row RH, Capaldi RA, Gibson BW. PMID: 15848193.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimalsCells
    113. The human mitochondrial proteome: oxidative stress, protein modifications and oxidative phosphorylation. Int J Biochem Cell Biol. 2005 May; 37(5):927-34. Gibson BW. PMID: 15743667.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansCells
    114. Rapid purification and mass spectrometric characterization of mitochondrial NADH dehydrogenase (Complex I) from rodent brain and a dopaminergic neuronal cell line. Mol Cell Proteomics. 2005 Jan; 4(1):84-96. Schilling B, Bharath M M S, Row RH, Murray J, Cusack MP, Capaldi RA, Freed CR, Prasad KN, Andersen JK, Gibson BW. PMID: 15591592.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    115. Lipophilic regulator of a developmental switch in Caenorhabditis elegans. Aging Cell. 2004 Dec; 3(6):413-21. Gill MS, Held JM, Fisher AL, Gibson BW, Lithgow GJ. PMID: 15569358.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    116. Novel modification of lipid A of Francisella tularensis. Infect Immun. 2004 Sep; 72(9):5340-8. Phillips NJ, Schilling B, McLendon MK, Apicella MA, Gibson BW. PMID: 15322031; PMCID: PMC517411.
      View in: PubMed   Mentions: 77     Fields:    Translation:HumansCells
    117. Matrix-assisted laser desorption/ionization-time of flight-mass spectrometry of lipopolysaccharide species separated by slab-polyacrylamide gel electrophoresis: high-resolution separation and molecular weight determination of lipooligosaccharides from Vibrio fischeri strain HMK. Electrophoresis. 2004 Jul; 25(14):2156-64. Pupo E, Phillips NJ, Gibson BW, Apicella MA, Hardy E. PMID: 15273999.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    118. Expanded coverage of the human heart mitochondrial proteome using multidimensional liquid chromatography coupled with tandem mass spectrometry. J Proteome Res. 2004 May-Jun; 3(3):495-505. Gaucher SP, Taylor SW, Fahy E, Zhang B, Warnock DE, Ghosh SS, Gibson BW. PMID: 15253431.
      View in: PubMed   Mentions: 35     Fields:    Translation:HumansCells
    119. Exploiting proteomics in the discovery of drugs that target mitochondrial oxidative damage. Sci Aging Knowledge Environ. 2004 Mar 17; 2004(11):pe12. Gibson BW. PMID: 15028863.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    120. The Streptococcus gordonii platelet binding protein GspB undergoes glycosylation independently of export. J Bacteriol. 2004 Feb; 186(3):638-45. Bensing BA, Gibson BW, Sullam PM. PMID: 14729688; PMCID: PMC321503.
      View in: PubMed   Mentions: 55     Fields:    Translation:Cells
    121. Proteomic and immunochemical characterization of a role for stathmin in adult neurogenesis. FASEB J. 2004 Feb; 18(2):287-99. Jin K, Mao XO, Cottrell B, Schilling B, Xie L, Row RH, Sun Y, Peel A, Childs J, Gendeh G, Gibson BW, Greenberg DA. PMID: 14769823.
      View in: PubMed   Mentions: 29     Fields:    Translation:AnimalsCells
    122. Identification of a 3-deoxy-D-manno-octulosonic acid biosynthetic operon in Moraxella catarrhalis and analysis of a KdsA-deficient isogenic mutant. Infect Immun. 2003 Nov; 71(11):6426-34. Luke NR, Allen S, Gibson BW, Campagnari AA. PMID: 14573664; PMCID: PMC219605.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    123. Molecular components of a cell death pathway activated by endoplasmic reticulum stress. J Biol Chem. 2004 Jan 02; 279(1):177-87. Rao RV, Poksay KS, Castro-Obregon S, Schilling B, Row RH, del Rio G, Gibson BW, Ellerby HM, Bredesen DE. PMID: 14561754.
      View in: PubMed   Mentions: 54     Fields:    Translation:HumansCells
    124. Proteome of Haemophilus ducreyi by 2-D SDS-PAGE and mass spectrometry: strain variation, virulence, and carbohydrate expression. J Proteome Res. 2003 Sep-Oct; 2(5):523-33. Scheffler NK, Falick AM, Hall SC, Ray WC, Post DM, Munson RS, Gibson BW. PMID: 14582649.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    125. Phosphospecific proteolysis for mapping sites of protein phosphorylation. Nat Biotechnol. 2003 Sep; 21(9):1047-54. Knight ZA, Schilling B, Row RH, Kenski DM, Gibson BW, Shokat KM. PMID: 12923550.
      View in: PubMed   Mentions: 35     Fields:    Translation:Cells
    126. MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides. J Am Soc Mass Spectrom. 2003 Aug; 14(8):834-50. Schilling B, Row RH, Gibson BW, Guo X, Young MM. PMID: 12892908.
      View in: PubMed   Mentions: 104     Fields:    Translation:AnimalsCells
    127. Primary sequence characterization of catestatin intermediates and peptides defines proteolytic cleavage sites utilized for converting chromogranin a into active catestatin secreted from neuroendocrine chromaffin cells. Biochemistry. 2003 Jun 17; 42(23):6938-46. Lee JC, Taylor CV, Gaucher SP, Toneff T, Taupenot L, Yasothornsrikul S, Mahata SK, Sei C, Parmer RJ, Neveu JM, Lane WS, Gibson BW, O'Connor DT, Hook VY. PMID: 12795588.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    128. Metabolic incorporation of unnatural sialic acids into Haemophilus ducreyi lipooligosaccharides. Proc Natl Acad Sci U S A. 2003 Mar 18; 100(6):3089-94. Goon S, Schilling B, Tullius MV, Gibson BW, Bertozzi CR. PMID: 12615992; PMCID: PMC152251.
      View in: PubMed   Mentions: 23     Fields:    Translation:Cells
    129. Characterization of the human heart mitochondrial proteome. Nat Biotechnol. 2003 Mar; 21(3):281-6. Taylor SW, Fahy E, Zhang B, Glenn GM, Warnock DE, Wiley S, Murphy AN, Gaucher SP, Capaldi RA, Gibson BW, Ghosh SS. PMID: 12592411.
      View in: PubMed   Mentions: 241     Fields:    Translation:HumansAnimalsCells
    130. The msbB mutant of Neisseria meningitidis strain NMB has a defect in lipooligosaccharide assembly and transport to the outer membrane. Infect Immun. 2003 Feb; 71(2):647-55. Post DM, Ketterer MR, Phillips NJ, Gibson BW, Apicella MA. PMID: 12540541; PMCID: PMC145375.
      View in: PubMed   Mentions: 13     Fields:    Translation:Cells
    131. Identification and characterization of the N-acetylglucosamine glycosyltransferase gene of Haemophilus ducreyi. Infect Immun. 2002 Oct; 70(10):5887-92. Sun S, Scheffler NK, Gibson BW, Wang J, Munson RS. PMID: 12228324; PMCID: PMC128345.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    132. An alternative strategy to determine the mitochondrial proteome using sucrose gradient fractionation and 1D PAGE on highly purified human heart mitochondria. J Proteome Res. 2002 Sep-Oct; 1(5):451-8. Taylor SW, Warnock DE, Glenn GM, Zhang B, Fahy E, Gaucher SP, Capaldi RA, Gibson BW, Ghosh SS. PMID: 12645917.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    133. The lbgAB gene cluster of Haemophilus ducreyi encodes a beta-1,4-galactosyltransferase and an alpha-1,6-DD-heptosyltransferase involved in lipooligosaccharide biosynthesis. Infect Immun. 2002 Jun; 70(6):2853-61. Tullius MV, Phillips NJ, Scheffler NK, Samuels NM, Munson Jr RS, Hansen EJ, Stevens-Riley M, Campagnari AA, Gibson BW. PMID: 12010972; PMCID: PMC128009.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    134. Haemophilus influenzae type b strain A2 has multiple sialyltransferases involved in lipooligosaccharide sialylation. J Biol Chem. 2002 Apr 26; 277(17):14598-611. Jones PA, Samuels NM, Phillips NJ, Munson RS, Bozue JA, Arseneau JA, Nichols WA, Zaleski A, Gibson BW, Apicella MA. PMID: 11842084.
      View in: PubMed   Mentions: 50     Fields:    Translation:Cells
    135. Intracellular survival of Neisseria gonorrhoeae in male urethral epithelial cells: importance of a hexaacyl lipid A. Infect Immun. 2002 Feb; 70(2):909-20. Post DM, Phillips NJ, Shao JQ, Entz DD, Gibson BW, Apicella MA. PMID: 11796626; PMCID: PMC127693.
      View in: PubMed   Mentions: 32     Fields:    Translation:HumansCells
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