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    Wallace Marshall, PhD

    TitleProfessor
    SchoolUCSF School of Medicine
    DepartmentBiochemistry and Biophysics
    Address600 16th Street
    San Francisco CA 94158
    Phone415-514-4304

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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Slabodnick MM, Ruby JG, Dunn JG, Feldman JL, DeRisi JL, Marshall WF. The kinase regulator mob1 acts as a patterning protein for stentor morphogenesis. PLoS Biol. 2014 May; 12(5):e1001861.
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      2. Marshall WF. The Golgi is a measuring cup. Dev Cell. 2014 May 12; 29(3):259-60.
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      3. Chan YH, Marshall WF. Organelle size scaling of the budding yeast vacuole is tuned by membrane trafficking rates. Biophys J. 2014 May 6; 106(9):1986-96.
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      4. Ishikawa H, Ide T, Yagi T, Jiang X, Hirono M, Sasaki H, Yanagisawa H, Wemmer KA, Stainier DY, Qin H, Kamiya R, Marshall WF. Correction: TTC26/DYF13 is an intraflagellar transport protein required for transport of motility-related proteins into flagella. Elife. 2014; 3:e02897.
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      5. Yanagisawa HA, Mathis G, Oda T, Hirono M, Richey EA, Ishikawa H, Marshall WF, Kikkawa M, Qin H. FAP20 is an inner junction protein of doublet microtubules essential for both the planar asymmetrical waveform and stability of flagella in Chlamydomonas. Mol Biol Cell. 2014 May; 25(9):1472-83.
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      6. Ishikawa H, Ide T, Yagi T, Jiang X, Hirono M, Sasaki H, Yanagisawa H, Wemmer KA, Stainier DY, Qin H, Kamiya R, Marshall WF. TTC26/DYF13 is an intraflagellar transport protein required for transport of motility-related proteins into flagella. Elife. 2014; 3:e01566.
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      7. Slabodnick M, Prevo B, Gross P, Sheung J, Marshall W. Visualizing Cytoplasmic Flow During Single-cell Wound Healing in Stentor coeruleus. J Vis Exp. 2013; (82).
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      8. Avasthi P, Marshall WF. Ciliary regulation: disassembly takes the spotlight. Curr Biol. 2013 Nov 18; 23(22):R1001-3.
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      9. Marshall WF. Differential geometry meets the cell. Cell. 2013 Jul 18; 154(2):265-6.
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      10. Shih SM, Engel BD, Kocabas F, Bilyard T, Gennerich A, Marshall WF, Yildiz A. Intraflagellar transport drives flagellar surface motility. Elife. 2013; 2:e00744.
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      11. Avasthi P, Marshall W. Ciliary secretion: switching the cellular antenna to 'transmit'. Curr Biol. 2013 Jun 3; 23(11):R471-3.
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      12. Ludington WB, Wemmer KA, Lechtreck KF, Witman GB, Marshall WF. Avalanche-like behavior in ciliary import. Proc Natl Acad Sci U S A. 2013 Mar 5; 110(10):3925-30.
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      13. Marshall WF. Methods in Enzymology. Cilia, part A. Preface. Methods Enzymol. 2013; 524:xv-xvii.
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      14. Avasthi P, Marshall WF. Chemical screening methods for flagellar phenotypes in Chlamydomonas. Methods Enzymol. 2013; 525:351-69.
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      15. Marshall WF. Methods in Enzymology. Cilia, part B. Preface. Methods Enzymol. 2013; 525:xvii-xix.
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      16. Rompolas P, Azimzadeh J, Marshall WF, King SM. Analysis of ciliary assembly and function in planaria. Methods Enzymol. 2013; 525:245-64.
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      17. Ishikawa H, Marshall WF. Isolation of mammalian primary cilia. Methods Enzymol. 2013; 525:311-25.
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      18. Marshall WF, Young KD, Swaffer M, Wood E, Nurse P, Kimura A, Frankel J, Wallingford J, Walbot V, Qu X, Roeder AH. What determines cell size? BMC Biol. 2012; 10:101.
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      19. Apte ZS, Marshall WF. Statistical method for comparing the level of intracellular organization between cells. Proc Natl Acad Sci U S A. 2013 Mar 12; 110(11):E1006-15.
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      20. Rafelski SM, Viana MP, Zhang Y, Chan YH, Thorn KS, Yam P, Fung JC, Li H, Costa Lda F, Marshall WF. Mitochondrial network size scaling in budding yeast. Science. 2012 Nov 9; 338(6108):822-4.
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      21. Lim WA, Alvania R, Marshall WF. Cell biology 2.0. Trends Cell Biol. 2012 Dec; 22(12):611-2.
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      22. Tang N, Marshall WF. Centrosome positioning in vertebrate development. J Cell Sci. 2012 Nov 1; 125(Pt 21):4951-61.
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      23. Ludington WB, Shi LZ, Zhu Q, Berns MW, Marshall WF. Organelle size equalization by a constitutive process. Curr Biol. 2012 Nov 20; 22(22):2173-9.
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      24. Engel BD, Ishikawa H, Wemmer KA, Geimer S, Wakabayashi K, Hirono M, Craige B, Pazour GJ, Witman GB, Kamiya R, Marshall WF. The role of retrograde intraflagellar transport in flagellar assembly, maintenance, and function. J Cell Biol. 2012 Oct 1; 199(1):151-67.
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      25. Marshall WF. Centriole asymmetry determines algal cell geometry. Curr Opin Plant Biol. 2012 Dec; 15(6):632-7.
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      26. Chan YH, Marshall WF. How cells know the size of their organelles. Science. 2012 Sep 7; 337(6099):1186-9.
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      27. Marshall WF. Organelle size control systems: from cell geometry to organelle-directed medicine. Bioessays. 2012 Sep; 34(9):721-4.
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      28. Avasthi P, Marley A, Lin H, Gregori-Puigjane E, Shoichet BK, von Zastrow M, Marshall WF. A chemical screen identifies class a g-protein coupled receptors as regulators of cilia. ACS Chem Biol. 2012 May 18; 7(5):911-9.
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      29. Ishikawa H, Thompson J, Yates JR, Marshall WF. Proteomic analysis of mammalian primary cilia. Curr Biol. 2012 Mar 6; 22(5):414-9.
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      30. Azimzadeh J, Wong ML, Downhour DM, Sánchez Alvarado A, Marshall WF. Centrosome loss in the evolution of planarians. Science. 2012 Jan 27; 335(6067):461-3.
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      31. Avasthi P, Marshall WF. Stages of ciliogenesis and regulation of ciliary length. Differentiation. 2012 Feb; 83(2):S30-42.
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      32. Li S, Fernandez JJ, Marshall WF, Agard DA. Three-dimensional structure of basal body triplet revealed by electron cryo-tomography. EMBO J. 2012 Feb 1; 31(3):552-62.
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      33. Yang Y, Sage TL, Liu Y, Ahmad TR, Marshall WF, Shiu SH, Froehlich JE, Imre KM, Osteryoung KW. CLUMPED CHLOROPLASTS 1 is required for plastid separation in Arabidopsis. Proc Natl Acad Sci U S A. 2011 Nov 8; 108(45):18530-5.
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      34. Marshall WF. Origins of cellular geometry. BMC Biol. 2011; 9:57.
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      35. Marshall WF. Centrosome size: scaling without measuring. Curr Biol. 2011 Aug 9; 21(15):R594-6.
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      36. Tang N, Marshall WF, McMahon M, Metzger RJ, Martin GR. Control of mitotic spindle angle by the RAS-regulated ERK1/2 pathway determines lung tube shape. Science. 2011 Jul 15; 333(6040):342-5.
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      37. Ishikawa H, Marshall WF. Ciliogenesis: building the cell's antenna. Nat Rev Mol Cell Biol. 2011 Apr; 12(4):222-34.
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      38. Rafelski SM, Keller LC, Alberts JB, Marshall WF. Apparent diffusive motion of centrin foci in living cells: implications for diffusion-based motion in centriole duplication. Phys Biol. 2011 Apr; 8(2):026010.
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      39. Engel BD, Ishikawa H, Feldman JL, Wilson CW, Chuang PT, Snedecor J, Williams J, Sun Z, Marshall WF. A cell-based screen for inhibitors of flagella-driven motility in Chlamydomonas reveals a novel modulator of ciliary length and retrograde actin flow. Cytoskeleton (Hoboken). 2011 Mar; 68(3):188-203.
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      40. Yang Y, Cochran DA, Gargano MD, King I, Samhat NK, Burger BP, Sabourin KR, Hou Y, Awata J, Parry DA, Marshall WF, Witman GB, Lu X. Regulation of flagellar motility by the conserved flagellar protein CG34110/Ccdc135/FAP50. Mol Biol Cell. 2011 Apr; 22(7):976-87.
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      41. Azimzadeh J, Marshall WF. Building the centriole. Curr Biol. 2010 Sep 28; 20(18):R816-25.
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      42. Keller LC, Wemmer KA, Marshall WF. Influence of centriole number on mitotic spindle length and symmetry. Cytoskeleton (Hoboken). 2010 Aug; 67(8):504-18.
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      43. Marshall WF. Cilia self-organize in response to planar cell polarity and flow. Nat Cell Biol. 2010 Apr; 12(4):314-5.
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      44. Chan YH, Marshall WF. Scaling properties of cell and organelle size. Organogenesis. 2010 Apr-Jun; 6(2):88-96.
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      45. Engel BD, Lechtreck KF, Sakai T, Ikebe M, Witman GB, Marshall WF. Total internal reflection fluorescence (TIRF) microscopy of Chlamydomonas flagella. Methods Cell Biol. 2009; 93:157-77.
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      46. Engel BD, Ludington WB, Marshall WF. Intraflagellar transport particle size scales inversely with flagellar length: revisiting the balance-point length control model. J Cell Biol. 2009 Oct 5; 187(1):81-9.
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      47. Feldman JL, Marshall WF. ASQ2 encodes a TBCC-like protein required for mother-daughter centriole linkage and mitotic spindle orientation. Curr Biol. 2009 Jul 28; 19(14):1238-43.
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      48. Marshall WF. Quantitative high-throughput assays for flagella-based motility in chlamydomonas using plate-well image analysis and transmission correlation spectroscopy. J Biomol Screen. 2009 Feb; 14(2):133-41.
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      49. Marshall WF. Centriole evolution. Curr Opin Cell Biol. 2009 Feb; 21(1):14-9.
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      50. Keller LC, Geimer S, Romijn E, Yates J, Zamora I, Marshall WF. Molecular architecture of the centriole proteome: the conserved WD40 domain protein POC1 is required for centriole duplication and length control. Mol Biol Cell. 2009 Feb; 20(4):1150-66.
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      51. Rasi MQ, Parker JD, Feldman JL, Marshall WF, Quarmby LM. Katanin knockdown supports a role for microtubule severing in release of basal bodies before mitosis in Chlamydomonas. Mol Biol Cell. 2009 Jan; 20(1):379-88.
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      52. Marshall WF. Modeling recursive RNA interference. PLoS Comput Biol. 2008; 4(9):e1000183.
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      53. Marshall WF. Controlling size within cells. Semin Cell Dev Biol. 2008 Dec; 19(6):479.
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      54. Rafelski SM, Marshall WF. Building the cell: design principles of cellular architecture. Nat Rev Mol Cell Biol. 2008 Aug; 9(8):593-602.
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      55. Marshall WF. Engineering design principles for organelle size control systems. Semin Cell Dev Biol. 2008 Dec; 19(6):520-4.
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      56. Marshall WF, Kintner C. Cilia orientation and the fluid mechanics of development. Curr Opin Cell Biol. 2008 Feb; 20(1):48-52.
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      57. Marshall WF. The cell biological basis of ciliary disease. J Cell Biol. 2008 Jan 14; 180(1):17-21.
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      58. Keller LC, Marshall WF. Isolation and proteomic analysis of Chlamydomonas centrioles. Methods Mol Biol. 2008; 432:289-300.
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      59. Marshall WF. Use of transcriptomic data to support organelle proteomic analysis. Methods Mol Biol. 2008; 432:403-14.
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      60. Marshall WF. Basal bodies platforms for building cilia. Curr Top Dev Biol. 2008; 85:1-22.
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      61. Marshall WF. Centriole assembly: the origin of nine-ness. Curr Biol. 2007 Dec 18; 17(24):R1057-9.
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      62. Marshall WF. Don'T blink: observing the ultra-fast contraction of spasmonemes. Biophys J. 2008 Jan 1; 94(1):4-5.
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      63. Merchant SS, Prochnik SE, Vallon O, Harris EH, Karpowicz SJ, Witman GB, Terry A, Salamov A, Fritz-Laylin LK, Maréchal-Drouard L, Marshall WF, Qu LH, Nelson DR, Sanderfoot AA, Spalding MH, Kapitonov VV, Ren Q, Ferris P, Lindquist E, Shapiro H, Lucas SM, Grimwood J, Schmutz J, Cardol P, Cerutti H, Chanfreau G, Chen CL, Cognat V, Croft MT, Dent R, Dutcher S, Fernández E, Fukuzawa H, González-Ballester D, González-Halphen D, Hallmann A, Hanikenne M, Hippler M, Inwood W, Jabbari K, Kalanon M, Kuras R, Lefebvre PA, Lemaire SD, Lobanov AV, Lohr M, Manuell A, Meier I, Mets L, Mittag M, Mittelmeier T, Moroney JV, Moseley J, Napoli C, Nedelcu AM, Niyogi K, Novoselov SV, Paulsen IT, Pazour G, Purton S, Ral JP, Riaño-Pachón DM, Riekhof W, Rymarquis L, Schroda M, Stern D, Umen J, Willows R, Wilson N, Zimmer SL, Allmer J, Balk J, Bisova K, Chen CJ, Elias M, Gendler K, Hauser C, Lamb MR, Ledford H, Long JC, Minagawa J, Page MD, Pan J, Pootakham W, Roje S, Rose A, Stahlberg E, Terauchi AM, Yang P, Ball S, Bowler C, Dieckmann CL, Gladyshev VN, Green P, Jorgensen R, Mayfield S, Mueller-Roeber B, Rajamani S, Sayre RT, Brokstein P, Dubchak I, Goodstein D, Hornick L, Huang YW, Jhaveri J, Luo Y, Martínez D, Ngau WC, Otillar B, Poliakov A, Porter A, Szajkowski L, Werner G, Zhou K, Grigoriev IV, Rokhsar DS, Grossman AR. The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science. 2007 Oct 12; 318(5848):245-50.
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      64. Feldman JL, Geimer S, Marshall WF. The mother centriole plays an instructive role in defining cell geometry. PLoS Biol. 2007 Jun; 5(6):e149.
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      65. Marshall WF. Stability and robustness of an organelle number control system: modeling and measuring homeostatic regulation of centriole abundance. Biophys J. 2007 Sep 1; 93(5):1818-33.
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      66. Marshall WF. What is the function of centrioles? J Cell Biochem. 2007 Mar 1; 100(4):916-22.
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      67. Wemmer KA, Marshall WF. Flagellar length control in chlamydomonas--paradigm for organelle size regulation. Int Rev Cytol. 2007; 260:175-212.
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      68. Mogilner A, Wollman R, Marshall WF. Quantitative modeling in cell biology: what is it good for? Dev Cell. 2006 Sep; 11(3):279-87.
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      69. Kennedy TE, Wang H, Marshall W, Tessier-Lavigne M. Axon guidance by diffusible chemoattractants: a gradient of netrin protein in the developing spinal cord. J Neurosci. 2006 Aug 23; 26(34):8866-74.
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      70. Marshall WF, Nonaka S. Cilia: tuning in to the cell's antenna. Curr Biol. 2006 Aug 8; 16(15):R604-14.
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      71. Nonaka S, Yoshiba S, Watanabe D, Ikeuchi S, Goto T, Marshall WF, Hamada H. De novo formation of left-right asymmetry by posterior tilt of nodal cilia. PLoS Biol. 2005 Aug; 3(8):e268.
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      72. Keller LC, Romijn EP, Zamora I, Yates JR, Marshall WF. Proteomic analysis of isolated chlamydomonas centrioles reveals orthologs of ciliary-disease genes. Curr Biol. 2005 Jun 21; 15(12):1090-8.
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      73. Zamora I, Marshall WF. A mutation in the centriole-associated protein centrin causes genomic instability via increased chromosome loss in Chlamydomonas reinhardtii. BMC Biol. 2005; 3:15.
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      74. Stolc V, Samanta MP, Tongprasit W, Marshall WF. Genome-wide transcriptional analysis of flagellar regeneration in Chlamydomonas reinhardtii identifies orthologs of ciliary disease genes. Proc Natl Acad Sci U S A. 2005 Mar 8; 102(10):3703-7.
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      75. Wemmer KA, Marshall WF. Flagellar motility: all pull together. Curr Biol. 2004 Dec 14; 14(23):R992-3.
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      76. Marshall WF. Human cilia proteome contains homolog of zebrafish polycystic kidney disease gene qilin. Curr Biol. 2004 Nov 9; 14(21):R913-4.
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      77. Marshall WF, Qin H, Rodrigo Brenni M, Rosenbaum JL. Flagellar length control system: testing a simple model based on intraflagellar transport and turnover. Mol Biol Cell. 2005 Jan; 16(1):270-8.
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      78. Zamora I, Feldman JL, Marshall WF. PCR-based assay for mating type and diploidy in Chlamydomonas. Biotechniques. 2004 Oct; 37(4):534-6.
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      79. Feldman JL, Marshall WF. Centrioles: bad to be bald? Curr Biol. 2004 Aug 24; 14(16):R659-60.
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      80. Marshall WF. Cellular length control systems. Annu Rev Cell Dev Biol. 2004; 20:677-93.
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      81. Marshall WF. Gene expression and nuclear architecture during development and differentiation. Mech Dev. 2003 Nov; 120(11):1217-30.
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      82. Marshall W. From cells on up: Symposium on Cell Biology of Development and Disease. EMBO Rep. 2003 Jun; 4(6):556-9.
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      83. Marshall WF, Rosenbaum JL. Tubulin superfamily: giving birth to triplets. Curr Biol. 2003 Jan 21; 13(2):R55-6.
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      84. Marshall W. Size control in dynamic organelles. Trends Cell Biol. 2002 Sep; 12(9):414-9.
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      85. Marshall WF. Loss of checkpoint proteins: an occupational hazard. Trends Cell Biol. 2002 Apr; 12(4):160.
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      86. Marshall WF. Order and disorder in the nucleus. Curr Biol. 2002 Mar 5; 12(5):R185-92.
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      87. Marshall WF. Polar wind left flapping in the breeze? Trends Cell Biol. 2002 Jan; 12(1):9.
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      88. Marshall WF, Marko JF, Agard DA, Sedat JW. Chromosome elasticity and mitotic polar ejection force measured in living Drosophila embryos by four-dimensional microscopy-based motion analysis. Curr Biol. 2001 Apr 17; 11(8):569-78.
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      89. Fung JC, Marshall WF, Dernburg A, Agard DA, Sedat JW. Homologous chromosome pairing in Drosophila melanogaster proceeds through multiple independent initiations. J Cell Biol. 1998 Apr 6; 141(1):5-20.
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      90. Marshall WF, Straight A, Marko JF, Swedlow J, Dernburg A, Belmont A, Murray AW, Agard DA, Sedat JW. Interphase chromosomes undergo constrained diffusional motion in living cells. Curr Biol. 1997 Dec 1; 7(12):930-9.
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      91. Straight AF, Marshall WF, Sedat JW, Murray AW. Mitosis in living budding yeast: anaphase A but no metaphase plate. Science. 1997 Jul 25; 277(5325):574-8.
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      92. Nunnari J, Marshall WF, Straight A, Murray A, Sedat JW, Walter P. Mitochondrial transmission during mating in Saccharomyces cerevisiae is determined by mitochondrial fusion and fission and the intramitochondrial segregation of mitochondrial DNA. Mol Biol Cell. 1997 Jul; 8(7):1233-42.
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      93. Oegema K, Marshall WF, Sedat JW, Alberts BM. Two proteins that cycle asynchronously between centrosomes and nuclear structures: Drosophila CP60 and CP190. J Cell Sci. 1997 Jul; 110 ( Pt 14):1573-83.
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      94. Marshall WF, Fung JC, Sedat JW. Deconstructing the nucleus: global architecture from local interactions. Curr Opin Genet Dev. 1997 Apr; 7(2):259-63.
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      95. Dernburg AF, Broman KW, Fung JC, Marshall WF, Philips J, Agard DA, Sedat JW. Perturbation of nuclear architecture by long-distance chromosome interactions. Cell. 1996 May 31; 85(5):745-59.
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      96. Marshall WF, Dernburg AF, Harmon B, Agard DA, Sedat JW. Specific interactions of chromatin with the nuclear envelope: positional determination within the nucleus in Drosophila melanogaster. Mol Biol Cell. 1996 May; 7(5):825-42.
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