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Karla Lindquist, PhD

TitleScientific Lead, DSI
SchoolUCSF Chancellor/EVC/FAS
DepartmentLibrary
Address530 Parnassus Ave
San Francisco CA 94143
Phone415-502-3815
Emailkarla.lindquist@ucsf.edu
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Lindquist K, Sanford T, Friedlander TW, Paris PL, Porten SP. Copy number gains at chr3p25 and chr11p11 are associated with lymph node involvement and survival in muscle-invasive bladder tumors. PLoS One. 2017; 12(11):e0187975. PMID: 29140994.
      View in: PubMed
    2. Nguyen HG, Welty C, Lindquist K, Ngo V, Gilbert E, Bengtsson H, Magi-Galluzzi C, Jean-Gilles J, Yao J, Cooperberg M, Messing E, Klein EA, Carroll PR, Paris PL. Validation of GEMCaP as a DNA Based Biomarker to Predict Prostate Cancer Recurrence after Radical Prostatectomy. J Urol. 2017 Sep 20. PMID: 28941923.
      View in: PubMed
    3. Anantharaman A, Friedlander T, Lu D, Krupa R, Premasekharan G, Hough J, Edwards M, Paz R, Lindquist K, Graf R, Jendrisak A, Louw J, Dugan L, Baird S, Wang Y, Dittamore R, Paris PL. Programmed death-ligand 1 (PD-L1) characterization of circulating tumor cells (CTCs) in muscle invasive and metastatic bladder cancer patients. BMC Cancer. 2016 Sep 22; 16(1):744. PMID: 27658492.
      View in: PubMed
    4. Premasekharan G, Gilbert E, Okimoto RA, Hamirani A, Lindquist K, Ngo VT, Roy R, Hough J, Edwards M, Paz R, Foye A, Sood R, Copren KA, Gubens M, Small EJ, Bivona TG, Collisson EA, Friedlander TW, Paris PL. An improved CTC isolation scheme for pairing with downstream genomics: Demonstrating clinical utility in metastatic prostate, lung and pancreatic cancer. Cancer Lett. 2016 09 28; 380(1):144-52. PMID: 27343980.
      View in: PubMed
    5. Lindquist K, Paris PL, Hoffmann TJ, Cardin NJ, Kazma R, Mefford JA, Simko JP, Ngo V, Chen Y, Levin AM, Chitale D, Helfand BT, Catalona WJ, Rybicki BA, Witte JS. Mutational Landscape of Aggressive Prostate Tumors in African American Men. Cancer Res. 2016 04 01; 76(7):1860-8. PMID: 26921337; PMCID: PMC4772140 [Available on 04/01/17].
    6. Levin AM, Lindquist K, Avila A, Witte JS, Paris PL, Rybicki BA. Performance of the Genomic Evaluators of Metastatic Prostate Cancer (GEMCaP) tumor biomarker for identifying recurrent disease in African American patients. Cancer Epidemiol Biomarkers Prev. 2014 Aug; 23(8):1677-82. PMID: 24891551; PMCID: PMC4119547.
    7. Griffiths RI, Lindquist K, O'Malley CD, Gleeson ML, Duryea JL, Valderas JM, Danese MD. Undiagnosed diabetes in breast, colorectal, lung, and prostate cancer: incidence and risk factors. ISRN Oncol. 2014; 2014:607850. PMID: 24729897; PMCID: PMC3960743.
    8. Lindquist K, Jorgenson E, Hoffmann TJ, Witte JS. The impact of improved microarray coverage and larger sample sizes on future genome-wide association studies. Genet Epidemiol. 2013 May; 37(4):383-92. PMID: 23529720; PMCID: PMC4291231.
    9. Chia VM, O'Malley CD, Danese MD, Lindquist K, Gleeson ML, Kelsh MA, Griffiths RI. Prevalence and incidence of comorbidities in elderly women with ovarian cancer. Gynecol Oncol. 2013 May; 129(2):346-52. PMID: 23422502.
      View in: PubMed
    10. Danese MD, Lindquist K, Doan J, Lalla D, Brammer M, Griffiths RI. Effect of central nervous system metastases on treatment discontinuation and survival in older women receiving trastuzumab for metastatic breast cancer. J Cancer Epidemiol. 2012; 2012:819210. PMID: 22570657; PMCID: PMC3335251.
    11. Danese MD, O'Malley C, Lindquist K, Gleeson M, Griffiths RI. An observational study of the prevalence and incidence of comorbid conditions in older women with breast cancer. Ann Oncol. 2012 Jul; 23(7):1756-65. PMID: 22039090; PMCID: PMC3387819.
    12. Yaffe K, Lindquist K, Schwartz AV, Vitartas C, Vittinghoff E, Satterfield S, Simonsick EM, Launer L, Rosano C, Cauley JA, Harris T. Advanced glycation end product level, diabetes, and accelerated cognitive aging. Neurology. 2011 Oct 04; 77(14):1351-6. PMID: 21900628; PMCID: PMC3182758.
    13. Lindquist K, Danese MD, Mikhael J, Knopf KB, Griffiths RI. Health care utilization and mortality among elderly patients with myelodysplastic syndromes. Ann Oncol. 2011 May; 22(5):1181-8. PMID: 21041376; PMCID: PMC3082156.
    14. Yaffe K, Vittinghoff E, Lindquist K, Barnes D, Covinsky KE, Neylan T, Kluse M, Marmar C. Posttraumatic stress disorder and risk of dementia among US veterans. Arch Gen Psychiatry. 2010 Jun; 67(6):608-13. PMID: 20530010; PMCID: PMC2933793.
    15. Fiocco AJ, Lindquist K, Ferrell R, Li R, Simonsick EM, Nalls M, Harris TB, Yaffe K. COMT genotype and cognitive function: an 8-year longitudinal study in white and black elders. Neurology. 2010 Apr 20; 74(16):1296-302. PMID: 20404311; PMCID: PMC2860484.
    16. Yaffe K, Lindquist K, Vittinghoff E, Barnes D, Simonsick EM, Newman A, Satterfield S, Rosano C, Rubin SM, Ayonayon HN, Harris T. The effect of maintaining cognition on risk of disability and death. J Am Geriatr Soc. 2010 May; 58(5):889-94. PMID: 20406308; PMCID: PMC2924918.
    17. Covinsky KE, Yaffe K, Lindquist K, Cherkasova E, Yelin E, Blazer DG. Depressive symptoms in middle age and the development of later-life functional limitations: the long-term effect of depressive symptoms. J Am Geriatr Soc. 2010 Mar; 58(3):551-6. PMID: 20163486; PMCID: PMC2904810.
    18. Yaffe K, Lindquist K, Kluse M, Cawthon R, Harris T, Hsueh WC, Simonsick EM, Kuller L, Li R, Ayonayon HN, Rubin SM, Cummings SR. Telomere length and cognitive function in community-dwelling elders: findings from the Health ABC Study. Neurobiol Aging. 2011 Nov; 32(11):2055-60. PMID: 20031273; PMCID: PMC2916948.
    19. Mikhael J, Northridge K, Lindquist K, Kessler C, Deuson R, Danese M. Short-term and long-term failure of laparoscopic splenectomy in adult immune thrombocytopenic purpura patients: a systematic review. Am J Hematol. 2009 Nov; 84(11):743-8. PMID: 19714591.
      View in: PubMed
    20. Danese MD, Lindquist K, Gleeson M, Deuson R, Mikhael J. Cost and mortality associated with hospitalizations in patients with immune thrombocytopenic purpura. Am J Hematol. 2009 Oct; 84(10):631-5. PMID: 19705429.
      View in: PubMed
    21. Williams BA, Baillargeon JG, Lindquist K, Walter LC, Covinsky KE, Whitson HE, Steinman MA. Medication prescribing practices for older prisoners in the Texas prison system. Am J Public Health. 2010 Apr; 100(4):756-61. PMID: 19762661; PMCID: PMC2836339.
    22. Covinsky KE, Lindquist K, Dunlop DD, Yelin E. Pain, functional limitations, and aging. J Am Geriatr Soc. 2009 Sep; 57(9):1556-61. PMID: 19682122; PMCID: PMC2925684.
    23. Williams BA, Lindquist K, Hill T, Baillargeon J, Mellow J, Greifinger R, Walter LC. Caregiving behind bars: correctional officer reports of disability in geriatric prisoners. J Am Geriatr Soc. 2009 Jul; 57(7):1286-92. PMID: 19582902.
      View in: PubMed
    24. Yaffe K, Fiocco AJ, Lindquist K, Vittinghoff E, Simonsick EM, Newman AB, Satterfield S, Rosano C, Rubin SM, Ayonayon HN, Harris TB. Predictors of maintaining cognitive function in older adults: the Health ABC study. Neurology. 2009 Jun 09; 72(23):2029-35. PMID: 19506226; PMCID: PMC2692177.
    25. Walter LC, Lindquist K, Nugent S, Schult T, Lee SJ, Casadei MA, Partin MR. Impact of age and comorbidity on colorectal cancer screening among older veterans. Ann Intern Med. 2009 Apr 07; 150(7):465-73. PMID: 19349631; PMCID: PMC3769097.
    26. Lee SJ, Sudore RL, Williams BA, Lindquist K, Chen HL, Covinsky KE. Functional limitations, socioeconomic status, and all-cause mortality in moderate alcohol drinkers. J Am Geriatr Soc. 2009 Jun; 57(6):955-62. PMID: 19473456; PMCID: PMC2847409.
    27. Kanaya AM, Lindquist K, Harris TB, Launer L, Rosano C, Satterfield S, Yaffe K. Total and regional adiposity and cognitive change in older adults: The Health, Aging and Body Composition (ABC) study. Arch Neurol. 2009 Mar; 66(3):329-35. PMID: 19273751; PMCID: PMC2739693.
    28. Clark FL, Sahay A, Bertenthal D, Maddock L, Lindquist K, Grekin R, Chren MM. Variation in care for recurrent nonmelanoma skin cancer in a university-based practice and a veterans affairs clinic. Arch Dermatol. 2008 Sep; 144(9):1148-52. PMID: 18794460; PMCID: PMC2653265.
    29. Yaffe K, Lindquist K, Shlipak MG, Simonsick E, Fried L, Rosano C, Satterfield S, Atkinson H, Windham BG, Kurella-Tamura M. Cystatin C as a marker of cognitive function in elders: findings from the health ABC study. Ann Neurol. 2008 Jun; 63(6):798-802. PMID: 18496846; PMCID: PMC2584446.
    30. Lee SJ, Go AS, Lindquist K, Bertenthal D, Covinsky KE. Chronic conditions and mortality among the oldest old. Am J Public Health. 2008 Jul; 98(7):1209-14. PMID: 18511714; PMCID: PMC2424085.
    31. Sudore RL, Schickedanz AD, Landefeld CS, Williams BA, Lindquist K, Pantilat SZ, Schillinger D. Engagement in multiple steps of the advance care planning process: a descriptive study of diverse older adults. J Am Geriatr Soc. 2008 Jun; 56(6):1006-13. PMID: 18410324.
      View in: PubMed
    32. Holden KF, Lindquist K, Tylavsky FA, Rosano C, Harris TB, Yaffe K. Serum leptin level and cognition in the elderly: Findings from the Health ABC Study. Neurobiol Aging. 2009 Sep; 30(9):1483-9. PMID: 18358569.
      View in: PubMed
    33. Williams BA, Lindquist K, Sudore RL, Covinsky KE, Walter LC. Screening mammography in older women. Effect of wealth and prognosis. Arch Intern Med. 2008 Mar 10; 168(5):514-20. PMID: 18332298.
      View in: PubMed
    34. Covinsky KE, Lindquist K, Dunlop DD, Gill TM, Yelin E. Effect of arthritis in middle age on older-age functioning. J Am Geriatr Soc. 2008 Jan; 56(1):23-8. PMID: 18184204; PMCID: PMC2875135.
    35. Sudore RL, Landefeld CS, Barnes DE, Lindquist K, Williams BA, Brody R, Schillinger D. An advance directive redesigned to meet the literacy level of most adults: a randomized trial. Patient Educ Couns. 2007 Dec; 69(1-3):165-95. PMID: 17942272; PMCID: PMC2257986.
    36. Yaffe K, Lindquist K, Sen S, Cauley J, Ferrell R, Penninx B, Harris T, Li R, Cummings SR. Estrogen receptor genotype and risk of cognitive impairment in elders: findings from the Health ABC study. Neurobiol Aging. 2009 Apr; 30(4):607-14. PMID: 17889406; PMCID: PMC2826192.
    37. Moody-Ayers S, Lindquist K, Sen S, Covinsky KE. Childhood social and economic well-being and health in older age. Am J Epidemiol. 2007 Nov 01; 166(9):1059-67. PMID: 17720682.
      View in: PubMed
    38. Lee SJ, Moody-Ayers SY, Landefeld CS, Walter LC, Lindquist K, Segal MR, Covinsky KE. The relationship between self-rated health and mortality in older black and white Americans. J Am Geriatr Soc. 2007 Oct; 55(10):1624-9. PMID: 17697102.
      View in: PubMed
    39. Walter LC, Bertenthal D, Lindquist K, Konety BR. PSA screening among elderly men with limited life expectancies. JAMA. 2006 Nov 15; 296(19):2336-42. PMID: 17105796.
      View in: PubMed
    40. Yaffe K, Barnes D, Lindquist K, Cauley J, Simonsick EM, Penninx B, Satterfield S, Harris T, Cummings SR. Endogenous sex hormone levels and risk of cognitive decline in an older biracial cohort. Neurobiol Aging. 2007 Feb; 28(2):171-8. PMID: 17097195.
      View in: PubMed
    41. Williams BA, Lindquist K, Moody-Ayers SY, Walter LC, Covinsky KE. Functional impairment, race, and family expectations of death. J Am Geriatr Soc. 2006 Nov; 54(11):1682-7. PMID: 17087694.
      View in: PubMed
    42. Yaffe K, Kanaya AM, Lindquist K, Hsueh WC, Cummings SR, Beamer B, Newman A, Rosano C, Li R, Harris T. PPAR-gamma Pro12Ala genotype and risk of cognitive decline in elders. Neurobiol Aging. 2008 Jan; 29(1):78-83. PMID: 17052804; PMCID: PMC2233891.
    43. Yaffe K, Petersen RC, Lindquist K, Kramer J, Miller B. Subtype of mild cognitive impairment and progression to dementia and death. Dement Geriatr Cogn Disord. 2006; 22(4):312-9. PMID: 16940725.
      View in: PubMed
    44. Sudore RL, Landefeld CS, Williams BA, Barnes DE, Lindquist K, Schillinger D. Use of a modified informed consent process among vulnerable patients: a descriptive study. J Gen Intern Med. 2006 Aug; 21(8):867-73. PMID: 16881949; PMCID: PMC1831581.
    45. Walter LC, Lindquist K, O'Hare AM, Johansen KL. Targeting screening mammography according to life expectancy among women undergoing dialysis. Arch Intern Med. 2006 Jun 12; 166(11):1203-8. PMID: 16772248.
      View in: PubMed
    46. Williams BA, Lindquist K, Sudore RL, Strupp HM, Willmott DJ, Walter LC. Being old and doing time: functional impairment and adverse experiences of geriatric female prisoners. J Am Geriatr Soc. 2006 Apr; 54(4):702-7. PMID: 16686886.
      View in: PubMed
    47. Lee SJ, Lindquist K, Segal MR, Covinsky KE. Development and validation of a prognostic index for 4-year mortality in older adults. JAMA. 2006 Feb 15; 295(7):801-8. PMID: 16478903.
      View in: PubMed
    48. Covinsky KE, Hilton J, Lindquist K, Dudley RA. Development and validation of an index to predict activity of daily living dependence in community-dwelling elders. Med Care. 2006 Feb; 44(2):149-57. PMID: 16434914.
      View in: PubMed
    49. Moody-Ayers SY, Mehta KM, Lindquist K, Sands L, Covinsky KE. Black-white disparities in functional decline in older persons: the role of cognitive function. J Gerontol A Biol Sci Med Sci. 2005 Jul; 60(7):933-9. PMID: 16079221.
      View in: PubMed
    50. Yaffe K, Kanaya A, Lindquist K, Simonsick EM, Harris T, Shorr RI, Tylavsky FA, Newman AB. The metabolic syndrome, inflammation, and risk of cognitive decline. JAMA. 2004 Nov 10; 292(18):2237-42. PMID: 15536110.
      View in: PubMed
    51. Chren MM, Sahay AP, Sands LP, Maddock L, Lindquist K, Bertenthal D, Bacchetti P. Variation in care for nonmelanoma skin cancer in a private practice and a veterans affairs clinic. Med Care. 2004 Oct; 42(10):1019-26. PMID: 15377935.
      View in: PubMed
    52. Carey EC, Walter LC, Lindquist K, Covinsky KE. Development and validation of a functional morbidity index to predict mortality in community-dwelling elders. J Gen Intern Med. 2004 Oct; 19(10):1027-33. PMID: 15482555; PMCID: PMC1492580.
    53. Edwards ER, Lindquist K, Yaffe K. Clinical profile and course of cognitively normal patients evaluated in memory disorders clinics. Neurology. 2004 May 11; 62(9):1639-42. PMID: 15136703.
      View in: PubMed
    54. Walter LC, Lindquist K, Covinsky KE. Relationship between health status and use of screening mammography and Papanicolaou smears among women older than 70 years of age. Ann Intern Med. 2004 May 04; 140(9):681-8. PMID: 15126251.
      View in: PubMed
    55. Yaffe K, Lindquist K, Penninx BW, Simonsick EM, Pahor M, Kritchevsky S, Launer L, Kuller L, Rubin S, Harris T. Inflammatory markers and cognition in well-functioning African-American and white elders. Neurology. 2003 Jul 08; 61(1):76-80. PMID: 12847160.
      View in: PubMed
    56. Yaffe K, Fox P, Newcomer R, Sands L, Lindquist K, Dane K, Covinsky KE. Patient and caregiver characteristics and nursing home placement in patients with dementia. JAMA. 2002 Apr 24; 287(16):2090-7. PMID: 11966383.
      View in: PubMed
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