Peter Bacchetti, PhD

Title(s)Professor, Epidemiology & Biostatistics
SchoolSchool of Medicine
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    Collapse Biography 
    Collapse Education and Training
    University of California, Berkeley, CAB.A.06/1980Philosophy & Statistics
    Stanford University, Stanford, CAM.S.06/1982Statistics
    University of California, Berkeley, CAPh.D.06/1987Biostatistics
    Collapse Awards and Honors
    University of California, Berkeley1980Statistics Departmental Citation
    University of California, Berkeley1980Phi Beta Kappa
    Biometric Society, Western North American Region1988First place, student papre competition
    American Public Health Association1998Mortimer Spiegelman Award for outstanding contributions to health statistics
    American Statistical Association2004Fellow of the American Statistical Association
    University of California, San Francisco2009Award for Excellence in Faculty Advising in the Master's Degree in Clinical Research Program

    Collapse Overview 

    Collapse Research 
    Collapse Research Activities and Funding
    Statistical methods for modeling hepatitis C fibrosis progression
    NIH R01AI069952Mar 1, 2006 - Feb 28, 2010
    Role: Principal Investigator
    Statistical Methods for Complex HIV Cohort Studies
    NIH R01AI055085Sep 30, 2002 - Sep 30, 2006
    Role: Principal Investigator
    STATISTICAL METHODS FOR INFECTIONS DISEASE COHORT DATA
    NIH R01AI039932Jan 1, 1997 - Dec 31, 1999
    Role: Principal Investigator
    SMOOTHED INCOMPLETE DATA METHODS FOR STUDYING EPIDEMICS
    NIH R29AI031331Jun 1, 1991 - May 31, 1996
    Role: Principal Investigator

    Collapse ORNG Applications 
    Collapse Academic Senate

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Multiply spliced HIV RNA is a predictive measure of virus production ex vivo and in vivo following reversal of HIV latency. EBioMedicine. 2021 Mar; 65:103241. Zerbato JM, Khoury G, Zhao W, Gartner MJ, Pascoe RD, Rhodes A, Dantanarayana A, Gooey M, Anderson J, Bacchetti P, Deeks SG, McMahon J, Roche M, Rasmussen TA, Purcell DF, Lewin SR. PMID: 33647768.
      View in: PubMed   Mentions: 2     Fields:    
    2. Diagnostic accuracy of a liquid chromatography-tandem mass spectrometry assay in small hair samples for rifampin-resistant tuberculosis drug concentrations in a routine care setting. BMC Infect Dis. 2021 Jan 22; 21(1):99. Metcalfe J, Bacchetti P, Esmail A, Reckers A, Aguilar D, Wen A, Huo S, Muyindike WR, Hahn JA, Dheda K, Gandhi M, Gerona R. PMID: 33482745.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    3. Development and validation of a liquid chromatography-tandem mass spectrometry method for quantifying delamanid and its metabolite in small hair samples. J Chromatogr B Analyt Technol Biomed Life Sci. 2021 Apr 15; 1169:122467. Reckers A, Huo S, Esmail A, Dheda K, Bacchetti P, Gandhi M, Metcalfe J, Gerona R. PMID: 33713954.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    4. Replicate Aptima Assay for Quantifying Residual Plasma Viremia in Individuals on Antiretroviral Therapy. J Clin Microbiol. 2020 11 18; 58(12). Bakkour S, Deng X, Bacchetti P, Grebe E, Montalvo L, Worlock A, Stone M, Deeks SG, Richman DD, Busch MP. PMID: 32967900.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    5. Food Insecurity Is Associated With Lower Levels of Antiretroviral Drug Concentrations in Hair Among a Cohort of Women Living With Human Immunodeficiency Virus in the United States. Clin Infect Dis. 2020 09 12; 71(6):1517-1523. Leddy AM, Sheira LA, Tamraz B, Sykes C, Kashuba ADM, Wilson TE, Adedimeji A, Merenstein D, Cohen MH, Wentz EL, Adimora AA, Ofotokun I, Metsch LR, Turan JM, Bacchetti P, Weiser SD. PMID: 31608363.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    6. Effect of a Patient-Centered Decision Support Tool on Rates of Trial of Labor After Previous Cesarean Delivery: The PROCEED Randomized Clinical Trial. JAMA. 2020 06 02; 323(21):2151-2159. Kuppermann M, Kaimal AJ, Blat C, Gonzalez J, Thiet MP, Bermingham Y, Altshuler AL, Bryant AS, Bacchetti P, Grobman WA. PMID: 32484533.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    7. Validated LC-MS/MS Panel for Quantifying 11 Drug-Resistant TB Medications in Small Hair Samples. J Vis Exp. 2020 05 19; (159). Reckers A, Wen A, Aguilar D, Bacchetti P, Gandhi M, Metcalfe J, Gerona R. PMID: 32510502.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    8. Urine Tenofovir Concentrations Correlate With Plasma and Relate to Tenofovir Disoproxil Fumarate Adherence: A Randomized, Directly Observed Pharmacokinetic Trial (TARGET Study). Clin Infect Dis. 2020 05 06; 70(10):2143-2151. Drain PK, Kubiak RW, Siriprakaisil O, Klinbuayaem V, Quame-Amaglo J, Sukrakanchana PO, Tanasri S, Punyati P, Sirirungsi W, Cressey R, Bacchetti P, Okochi H, Baeten JM, Gandhi M, Cressey TR. PMID: 31314073.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansPHPublic Health
    9. Testing a Real-Time Tenofovir Urine Adherence Assay for Monitoring and Providing Feedback to Preexposure Prophylaxis in Kenya (PUMA): Protocol for a Pilot Randomized Controlled Trial. JMIR Res Protoc. 2020 Apr 02; 9(4):e15029. Drain P, Ngure K, Mugo N, Spinelli M, Chatterjee P, Bacchetti P, Glidden D, Baeten J, Gandhi M. PMID: 32238341.
      View in: PubMed   Mentions:
    10. Assessing suitability of next-generation viral outgrowth assays as proxies for classic QVOA to measure HIV-1 latent reservoir size. J Infect Dis. 2020 Mar 09. Stone M, Rosenbloom D, Bacchetti P, Deng X, Dimapasoc M, Keating S, Bakkour S, Richman D, Mellors J, Deeks S, Lai J, Beg S, Siliciano J, Pagliuzza A, Chomont N, Lackman-Smith C, Ptak RG, Busch MP, Reservoir Assay Validation and Evaluation Network (RAVEN) Study Group . PMID: 32147687.
      View in: PubMed   Mentions: 6     Fields:    
    11. Differential decay of intact and defective proviral DNA in HIV-1-infected individuals on suppressive antiretroviral therapy. JCI Insight. 2020 02 27; 5(4). Peluso MJ, Bacchetti P, Ritter KD, Beg S, Lai J, Martin JN, Hunt PW, Henrich TJ, Siliciano JD, Siliciano RF, Laird GM, Deeks SG. PMID: 32045386.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    12. Correlation of Linezolid Hair Concentrations with Plasma Exposure in Patients with Drug-Resistant Tuberculosis. Antimicrob Agents Chemother. 2020 02 21; 64(3). Wasserman S, Huo S, Ky K, Malig YN, Esmail A, Dheda K, Bacchetti P, Gerona R, Maartens G, Gandhi M, Metcalfe J. PMID: 31932382.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    13. Human Immunodeficiency Virus (HIV)-Infected CCR6+ Rectal CD4+ T Cells and HIV Persistence On Antiretroviral Therapy. J Infect Dis. 2020 02 18; 221(5):744-755. Anderson JL, Khoury G, Fromentin R, Solomon A, Chomont N, Sinclair E, Milush JM, Hartogensis W, Bacchetti P, Roche M, Tumpach C, Gartner M, Pitman MC, Epling CL, Hoh R, Hecht FM, Somsouk M, Cameron PU, Deeks SG, Lewin SR. PMID: 31796951.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    14. Development and validation of the first point-of-care assay to objectively monitor adherence to HIV treatment and prevention in real-time in routine settings. AIDS. 2020 02 01; 34(2):255-260. Gandhi M, Wang G, King R, Rodrigues WC, Vincent M, Glidden DV, Cressey TR, Bacchetti P, Spinelli MA, Okochi H, Siriprakaisil O, Klinbuayaem V, Mugo NR, Ngure K, Drain PK, Baeten JM. PMID: 31634188.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansPHPublic Health
    15. Impact of Antiretroviral Therapy Duration on HIV-1 Infection of T Cells within Anatomic Sites. J Virol. 2020 01 17; 94(3). Lee E, von Stockenstrom S, Morcilla V, Odevall L, Hiener B, Shao W, Hartogensis W, Bacchetti P, Milush J, Liegler T, Sinclair E, Hatano H, Hoh R, Somsouk M, Hunt P, Boritz E, Douek D, Fromentin R, Chomont N, Deeks SG, Hecht FM, Palmer S. PMID: 31723024.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    16. Correction to: The association of patient preferences and attitudes with trial of labor after cesarean. J Perinatol. 2019 Dec; 39(12):1696. Kaimal AJ, Grobman WA, Bryant A, Blat C, Bacchetti P, Gonzalez J, Thiet MP, Bermingham Y, Kuppermann M. PMID: 31601948.
      View in: PubMed   Mentions:    Fields:    
    17. Short- and Long-Term Pharmacologic Measures of HIV Pre-exposure Prophylaxis Use Among High-Risk Men Who Have Sex With Men in HPTN 067/ADAPT. J Acquir Immune Defic Syndr. 2019 10 01; 82(2):149-158. Velloza J, Bacchetti P, Hendrix CW, Murnane P, Hughes JP, Li M, Curlin ME, Holtz TH, Mannheimer S, Marzinke MA, Amico KR, Liu A, Piwowar-Manning E, Eshleman SH, Dye BJ, Gandhi M, Grant RM, HPTN 067/ADAPT Study Team . PMID: 31335588.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansPHPublic Health
    18. Association of Pharmacogenetic Markers With Atazanavir Exposure in HIV-Infected Women. Clin Pharmacol Ther. 2020 02; 107(2):315-318. Tamraz B, Huang Y, French AL, Kassaye S, Anastos K, Nowicki MJ, Gange S, Gustafson DR, Bacchetti P, Greenblatt RM, Hysi PG, Aouizerat BE, Women's Interagency HIV Study . PMID: 31562781.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    19. Memory CD4 + T-Cells Expressing HLA-DR Contribute to HIV Persistence During Prolonged Antiretroviral Therapy. Front Microbiol. 2019; 10:2214. Lee E, Bacchetti P, Milush J, Shao W, Boritz E, Douek D, Fromentin R, Liegler T, Hoh R, Deeks SG, Hecht FM, Chomont N, Palmer S. PMID: 31611857.
      View in: PubMed   Mentions:
    20. Statistical analysis of single-copy assays when some observations are zero. J Virus Erad. 2019 Sep 18; 5(3):167-173. Bacchetti P, Bosch RJ, Scully EP, Deng X, Busch MP, Deeks SG, Lewin SR. PMID: 31700665.
      View in: PubMed   Mentions:
    21. Genetic and clinical predictors of CD4 lymphocyte recovery during suppressive antiretroviral therapy: Whole exome sequencing and antiretroviral therapy response phenotypes. PLoS One. 2019; 14(8):e0219201. Greenblatt R, Bacchetti P, Boylan R, Kober K, Springer G, Anastos K, Busch M, Cohen M, Kassaye S, Gustafson D, Aouizerat B, Women’s Interagency HIV Study . PMID: 31415590.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    22. Association between Use of Methadone, Other Central Nervous System Depressants, and QTc Interval-Prolonging Medications and Risk of Mortality in a Large Cohort of Women Living with or at Risk for Human Immunodeficiency Virus Infection. Pharmacotherapy. 2019 09; 39(9):899-911. Tamraz B, Reisner L, French AL, King ST, Fischl MA, Ofotokun I, Kashuba A, Milam J, Murphy K, Augenbraun M, Liu C, Finley PR, Aouizerat B, Cocohoba J, Gange S, Bacchetti P, Greenblatt RM. PMID: 31332819.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    23. Tenofovir concentrations in hair strongly predict virologic suppression in breastfeeding women. AIDS. 2019 08 01; 33(10):1657-1662. Murnane PM, Bacchetti P, Currier JS, Brummel S, Okochi H, Phung N, Louie A, Kuncze K, Hoffman RM, Nematadzira T, Soko DK, Owor M, Saidi F, Flynn PM, Fowler MG, Gandhi M. PMID: 31021852.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    24. Simultaneous analysis of 11 medications for drug resistant TB in small hair samples to quantify adherence and exposure using a validated LC-MS/MS panel. J Chromatogr B Analyt Technol Biomed Life Sci. 2019 09 01; 1125:121729. Gerona R, Wen A, Aguilar D, Shum J, Reckers A, Bacchetti P, Gandhi M, Metcalfe J. PMID: 31369929.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    25. The association of patient preferences and attitudes with trial of labor after cesarean. J Perinatol. 2019 10; 39(10):1340-1348. Kaimal AJ, Grobman WA, Bryant A, Blat C, Bacchetti P, Gonzalez J, Thiet MP, Bermingham Y, Kuppermann M. PMID: 31270433.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    26. Measuring Adherence to Antiretroviral Therapy via Hair Concentrations in India. J Acquir Immune Defic Syndr. 2019 06 01; 81(2):202-206. Gandhi M, Devi S, Bacchetti P, Chandy S, Heylen E, Phung N, Kuncze K, Okochi H, Kumar R, Kurpad AV, Ekstrand ML. PMID: 30865182.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    27. Women's Preferences Regarding the Processes and Outcomes of Trial of Labor After Cesarean and Elective Repeat Cesarean Delivery. J Womens Health (Larchmt). 2019 08; 28(8):1143-1152. Kaimal AJ, Grobman WA, Bryant AS, Norrell L, Bermingham Y, Altshuler A, Thiet MP, Gonzalez J, Bacchetti P, Moghadassi M, Kuppermann M. PMID: 31112067.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    28. Brief Report: Validation of a Urine Tenofovir Immunoassay for Adherence Monitoring to PrEP and ART and Establishing the Cutoff for a Point-of-Care Test. J Acquir Immune Defic Syndr. 2019 05 01; 81(1):72-77. Gandhi M, Bacchetti P, Spinelli MA, Okochi H, Baeten JM, Siriprakaisil O, Klinbuayaem V, Rodrigues WC, Wang G, Vincent M, Cressey TR, Drain PK. PMID: 30664078.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansPHPublic Health
    29. Association of anti-tuberculosis drug concentrations in hair and treatment outcomes in MDR- and XDR-TB. ERJ Open Res. 2019 Apr; 5(2). Metcalfe J, Bacchetti P, Gerona R, Esmail A, Dheda K, Gandhi M. PMID: 31041318.
      View in: PubMed   Mentions:
    30. Assessing intra-lab precision and inter-lab repeatability of outgrowth assays of HIV-1 latent reservoir size. PLoS Comput Biol. 2019 04; 15(4):e1006849. Rosenbloom DIS, Bacchetti P, Stone M, Deng X, Bosch RJ, Richman DD, Siliciano JD, Mellors JW, Deeks SG, Ptak RG, Hoh R, Keating SM, Dimapasoc M, Massanella M, Lai J, Sobolewski MD, Kulpa DA, Busch MP, Reservoir Assay Validation and Evaluation Network (RAVEN) Study Group . PMID: 30978183.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    31. RAPID antiretroviral therapy: high virologic suppression rates with immediate antiretroviral therapy initiation in a vulnerable urban clinic population. AIDS. 2019 04 01; 33(5):825-832. Coffey S, Bacchetti P, Sachdev D, Bacon O, Jones D, Ospina-Norvell C, Torres S, Lynch E, Camp C, Mercer-Slomoff R, Lee S, Christopoulos K, Pilcher C, Hsu L, Jin C, Scheer S, Havlir D, Gandhi M. PMID: 30882490.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansPHPublic Health
    32. Sex-Based Differences in Human Immunodeficiency Virus Type 1 Reservoir Activity and Residual Immune Activation. J Infect Dis. 2019 03 15; 219(7):1084-1094. Scully EP, Gandhi M, Johnston R, Hoh R, Lockhart A, Dobrowolski C, Pagliuzza A, Milush JM, Baker CA, Girling V, Ellefson A, Gorelick R, Lifson J, Altfeld M, Alter G, Cedars M, Solomon A, Lewin SR, Karn J, Chomont N, Bacchetti P, Deeks SG. PMID: 30371873.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    33. Antiretroviral Concentrations in Hair Strongly Predict Virologic Response in a Large Human Immunodeficiency Virus Treatment-naive Clinical Trial. Clin Infect Dis. 2019 03 05; 68(6):1044-1047. Gandhi M, Bacchetti P, Ofokotun I, Jin C, Ribaudo HJ, Haas DW, Sheth AN, Horng H, Phung N, Kuncze K, Okochi H, Landovitz RJ, Lennox J, Currier JS, AIDS Clinical Trials Group (ACTG) 5257 Study Team . PMID: 30184104.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    34. Strategies to Improve Follow-up After Positive Fecal Immunochemical Tests in a Community-Based Setting: A Mixed-Methods Study. Clin Transl Gastroenterol. 2019 02; 10(2):e00010. Selby K, Jensen CD, Zhao WK, Lee JK, Slam A, Schottinger JE, Bacchetti P, Levin TR, Corley DA. PMID: 30829917.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansPHPublic Health
    35. Population Pharmacokinetics and Pharmacodynamics of Disulfiram on Inducing Latent HIV-1 Transcription in a Phase IIb Trial. Clin Pharmacol Ther. 2019 03; 105(3):692-702. Lee SA, Elliott JH, McMahon J, Hartogenesis W, Bumpus NN, Lifson JD, Gorelick RJ, Bacchetti P, Deeks SG, Lewin SR, Savic RM. PMID: 30137649.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCellsCTClinical Trials
    36. Similar tenofovir hair concentrations in men and women after directly observed dosing of tenofovir disoproxil fumarate/emtricitabine: implications for preexposure prophylaxis adherence monitoring. AIDS. 2018 09 24; 32(15):2189-2194. Koss CA, Liu AY, Castillo-Mancilla J, Bacchetti P, McHugh C, Kuncze K, Morrow M, Louie A, Seifert S, Okochi H, MaWhinney S, Gandhi M, Anderson PL. PMID: 30212404.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansPHPublic Health
    37. Race and Hepatitis C Care Continuum in an Underserved Birth Cohort. J Gen Intern Med. 2019 10; 34(10):2005-2013. Kim NJ, Locke CJ, Park H, Magee C, Bacchetti P, Khalili M. PMID: 30238404.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCellsPHPublic Health
    38. Development and Validation of an Immunoassay for Tenofovir in Urine as a Real-Time Metric of Antiretroviral Adherence. EClinicalMedicine. 2018 Aug-Sep; 2-3:22-28. Gandhi M, Bacchetti P, Rodrigues WC, Spinelli M, Koss CA, Drain PK, Baeten JM, Mugo NR, Ngure K, Benet LZ, Okochi H, Wang G, Vincent M. PMID: 30906930.
      View in: PubMed   Mentions:
    39. Estrogen receptor-1 is a key regulator of HIV-1 latency that imparts gender-specific restrictions on the latent reservoir. Proc Natl Acad Sci U S A. 2018 08 14; 115(33):E7795-E7804. Das B, Dobrowolski C, Luttge B, Valadkhan S, Chomont N, Johnston R, Bacchetti P, Hoh R, Gandhi M, Deeks SG, Scully E, Karn J. PMID: 30061382.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansCells
    40. Use of Nonantiretroviral Medications That May Impact Neurocognition: Patterns and Predictors in a Large, Long-Term HIV Cohort Study. . 2018 06 01; 78(2):202-208. Radtke KK, Bacchetti P, Anastos K, Merenstein D, Crystal H, Karim R, Weber KM, Edmonds A, Sheth AN, Fischl MA, Vance D, Greenblatt RM, Rubin LH. PMID: 29762344.
      View in: PubMed   Mentions:
    41. A randomized, controlled trial of mindfulness-based stress reduction in HIV infection. Brain Behav Immun. 2018 10; 73:331-339. Hecht FM, Moskowitz JT, Moran P, Epel ES, Bacchetti P, Acree M, Kemeny ME, Mendes WB, Duncan LG, Weng H, Levy JA, Deeks SG, Folkman S. PMID: 29842903.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    42. Development and validation of an assay to analyze atazanavir in human hair via liquid chromatography/tandem mass spectrometry. Rapid Commun Mass Spectrom. 2018 Mar 15; 32(5):431-441. Phung N, Kuncze K, Okochi H, Louie A, Benet LZ, Ofokotun I, Haas DW, Currier JS, Chawana TD, Sheth AN, Bacchetti P, Gandhi M, Horng H. PMID: 29315954.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    43. A Genome-Wide Association Study Identifies a Candidate Gene Associated With Atazanavir Exposure Measured in Hair. Clin Pharmacol Ther. 2018 11; 104(5):949-956. Tamraz B, Huang Y, French AL, Kassaye S, Anastos K, Nowicki MJ, Gange S, Gustafson DR, Bacchetti P, Greenblatt RM, Hysi PG, Aouizerat BE. PMID: 29315502.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    44. Impact of Moderate Alcohol Discontinuation on Insulin Action and Secretion in Latinos With and Without Hepatitis C. Alcohol Clin Exp Res. 2018 Mar; 42(3):492-499. Uribe LA, Bacchetti P, Gelman N, Burchard E, Fitch M, Hellerstein M, Khalili M. PMID: 29220547.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    45. Comparing pharmacologic measures of tenofovir exposure in a U.S. pre-exposure prophylaxis randomized trial. PLoS One. 2018; 13(1):e0190118. Baxi SM, Vittinghoff E, Bacchetti P, Huang Y, Chillag K, Wiegand R, Anderson PL, Grant R, Greenblatt RM, Buchbinder S, Gandhi M, Liu AY. PMID: 29315307.
      View in: PubMed   Mentions: 11     Fields:    Translation:PHPublic Health
    46. Comparison of Measures of Adherence to Human Immunodeficiency Virus Preexposure Prophylaxis Among Adolescent and Young Men Who Have Sex With Men in the United States. Clin Infect Dis. 2018 01 06; 66(2):213-219. Koss CA, Hosek SG, Bacchetti P, Anderson PL, Liu AY, Horng H, Benet LZ, Kuncze K, Louie A, Saberi P, Wilson CM, Gandhi M. PMID: 29020194.
      View in: PubMed   Mentions: 37     Fields:    Translation:HumansPHPublic Health
    47. Ovarian aging is associated with gray matter volume and disability in women with MS. Neurology. 2018 01 16; 90(3):e254-e260. Graves JS, Henry RG, Cree BAC, Lambert-Messerlian G, Greenblatt RM, Waubant E, Cedars MI, Zhu A, University of California, San Francisco MS-EPIC Team, , Bacchetti P, Hauser SL, Oksenberg JR. PMID: 29273686.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    48. Isoniazid concentrations in hair and plasma area-under-the-curve exposure among children with tuberculosis. PLoS One. 2017; 12(12):e0189101. Mave V, Kinikar A, Kagal A, Nimkar S, Koli H, Khwaja S, Bharadwaj R, Gerona R, Wen A, Ramachandran G, Kumar H, Bacchetti P, Dooley KE, Gupte N, Gupta A, Gandhi M. PMID: 29216273.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    49. Brief Report: Lopinavir Hair Concentrations Are the Strongest Predictor of Viremia in HIV-Infected Asian Children and Adolescents on Second-Line Antiretroviral Therapy. J Acquir Immune Defic Syndr. 2017 12 01; 76(4):367-371. Pintye J, Bacchetti P, Teeraananchai S, Kerr S, Prasitsuebsai W, Singtoroj T, Kuncze K, Louie A, Koss CA, Jin C, Phung N, Horng H, Sohn AH, Gandhi M. PMID: 28825944.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    50. Moderate Alcohol Use Is Not Associated With Fibrosis Progression in Human Immunodeficiency Virus/Hepatitis C Virus-Coinfected Women: A Prospective Cohort Study. Clin Infect Dis. 2017 Nov 29; 65(12):2050-2056. Kelly EM, Dodge JL, Bacchetti P, Sarkar M, French AL, Tien PC, Glesby MJ, Golub ET, Augenbraun M, Plankey M, Peters MG. PMID: 29020382.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    51. Reproductive Aging and Hepatic Fibrosis Progression in Human Immunodeficiency Virus/Hepatitis C Virus-Coinfected Women. Clin Infect Dis. 2017 Oct 30; 65(10):1695-1702. Sarkar M, Dodge JL, Greenblatt RM, Kuniholm MH, DeHovitz J, Plankey M, Kovacs A, French AL, Seaberg EC, Ofotokun I, Fischl M, Overton E, Kelly E, Bacchetti P, Peters MG, Women’s Interagency HIV Study . PMID: 29020239.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    52. Hair levels of preexposure prophylaxis drugs measure adherence and are associated with renal decline among men/transwomen. AIDS. 2017 Oct 23; 31(16):2245-2251. Gandhi M, Murnane PM, Bacchetti P, Elion R, Kolber MA, Cohen SE, Horng H, Louie A, Kuncze K, Koss CA, Anderson PL, Buchbinder S, Liu A. PMID: 28832411.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansPHPublic Health
    53. Mortality under plausible interventions on antiretroviral treatment and depression in HIV-infected women: an application of the parametric g-formula. Ann Epidemiol. 2017 12; 27(12):783-789.e2. Lesko CR, Todd JV, Cole SR, Edmonds A, Pence BW, Edwards JK, Mack WJ, Bacchetti P, Rubtsova A, Gange SJ, Adimora AA, WIHS Investigators . PMID: 28939001.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    54. An LC-MS/MS-based method to analyze the anti-tuberculosis drug bedaquiline in hair. Int J Tuberc Lung Dis. 2017 09 01; 21(9):1069-1070. Metcalfe J, Gerona R, Wen A, Bacchetti P, Gandhi M. PMID: 28826458.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    55. Prevalence and Predictors of Hospitalizations Among HIV-Infected and At-Risk HIV-Uninfected Women. . 2017 06 01; 75(2):e27-e35. Hotton AL, Weber KM, Hershow RC, Anastos K, Bacchetti P, Golub ET, Gustafson D, Levine AM, Young M, Cohen MH. PMID: 28002184.
      View in: PubMed   Mentions:
    56. Effects of Antiretroviral Therapy and Depressive Symptoms on All-Cause Mortality Among HIV-Infected Women. Am J Epidemiol. 2017 05 15; 185(10):869-878. Todd JV, Cole SR, Pence BW, Lesko CR, Bacchetti P, Cohen MH, Feaster DJ, Gange S, Griswold ME, Mack W, Rubtsova A, Wang C, Weedon J, Anastos K, Adimora AA. PMID: 28430844.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    57. Early and Delayed Antiretroviral Therapy Results in Comparable Reductions in CD8+ T Cell Exhaustion Marker Expression. AIDS Res Hum Retroviruses. 2017 07; 33(7):658-667. Rutishauser RL, Hartogensis W, Deguit CD, Krone M, Hoh R, Hecht FM, Pilcher CD, Bacchetti P, Deeks SG, Hunt PW, McCune JM. PMID: 28335609.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCellsPHPublic Health
    58. Human Immunodeficiency Virus Persistence and T-Cell Activation in Blood, Rectal, and Lymph Node Tissue in Human Immunodeficiency Virus-Infected Individuals Receiving Suppressive Antiretroviral Therapy. J Infect Dis. 2017 03 15; 215(6):911-919. Khoury G, Fromentin R, Solomon A, Hartogensis W, Killian M, Hoh R, Somsouk M, Hunt PW, Girling V, Sinclair E, Bacchetti P, Anderson JL, Hecht FM, Deeks SG, Cameron PU, Chomont N, Lewin SR. PMID: 28453847.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    59. Differences in Cumulative Exposure and Adherence to Tenofovir in the VOICE, iPrEx OLE, and PrEP Demo Studies as Determined via Hair Concentrations. AIDS Res Hum Retroviruses. 2017 08; 33(8):778-783. Koss CA, Bacchetti P, Hillier SL, Livant E, Horng H, Mgodi N, Mirembe BG, Gomez Feliciano K, Horn S, Liu AY, Glidden DV, Grant RM, Benet LZ, Louie A, van der Straten A, Chirenje ZM, Marrazzo JM, Gandhi M. PMID: 28253024.
      View in: PubMed   Mentions: 32     Fields:    
    60. Life-Space Assessment Predicts Hospital Readmission in Home-Limited Adults. J Am Geriatr Soc. 2017 May; 65(5):1004-1011. Fathi R, Bacchetti P, Haan MN, Houston TK, Patel K, Ritchie CS. PMID: 28152175.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    61. Association of serum albumin and aspartate transaminase with 5-year all-cause mortality in HIV/hepatitis C virus coinfection and HIV monoinfection. AIDS. 2017 01 02; 31(1):71-79. Scherzer R, Heymsfield SB, Rimland D, Powderly WG, Tien PC, Bacchetti P, Shlipak MG, Grunfeld C, Study of Fat Redistribution, Metabolic Change in HIV Infection (FRAM) . PMID: 27677166.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    62. Impact of a Mindfulness-Based Weight-Loss Intervention on Sleep Quality Among Adults with Obesity: Data from the SHINE Randomized Controlled Trial. J Altern Complement Med. 2017 Mar; 23(3):188-195. Adler E, Dhruva A, Moran PJ, Daubenmier J, Acree M, Epel ES, Bacchetti P, Prather AA, Mason A, Hecht FM. PMID: 28029852.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    63. Anti-HIV Antibody Responses and the HIV Reservoir Size during Antiretroviral Therapy. PLoS One. 2016; 11(8):e0160192. Lee SA, Bacchetti P, Chomont N, Fromentin R, Lewin SR, O'Doherty U, Palmer S, Richman DD, Siliciano JD, Yukl SA, Deeks SG, Burbelo PD. PMID: 27483366.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    64. Use of antimüllerian hormone to predict the menopausal transition in HIV-infected women. Am J Obstet Gynecol. 2017 Jan; 216(1):46.e1-46.e11. Scherzer R, Greenblatt RM, Merhi ZO, Kassaye S, Lambert-Messerlian G, Maki PM, Murphy K, Karim R, Bacchetti P. PMID: 27473002.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    65. CD4+ T Cells Expressing PD-1, TIGIT and LAG-3 Contribute to HIV Persistence during ART. PLoS Pathog. 2016 07; 12(7):e1005761. Fromentin R, Bakeman W, Lawani MB, Khoury G, Hartogensis W, DaFonseca S, Killian M, Epling L, Hoh R, Sinclair E, Hecht FM, Bacchetti P, Deeks SG, Lewin SR, Sékaly RP, Chomont N. PMID: 27415008.
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    66. A multi-analyte panel for non-invasive pharmacokinetic monitoring of second-line anti-tuberculosis drugs. Int J Tuberc Lung Dis. 2016 07; 20(7):991-2. Gerona R, Wen A, Koss C, Bacchetti P, Gandhi M, Metcalfe J. PMID: 27287660.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    67. Persistence of integrated HIV DNA in CXCR3?+?CCR6?+?memory CD4+ T cells in HIV-infected individuals on antiretroviral therapy. AIDS. 2016 06 19; 30(10):1511-20. Khoury G, Anderson JL, Fromentin R, Hartogenesis W, Smith MZ, Bacchetti P, Hecht FM, Chomont N, Cameron PU, Deeks SG, Lewin SR. PMID: 26807971.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansCells
    68. Best Practices for Biostatistical Consultation and Collaboration in Academic Health Centers. Am Stat. 2016; 70(2):187-194. Perkins SM, Bacchetti P, Davey CS, Lindsell CJ, Mazumdar M, Oster RA, Peduzzi PN, Rocke DM, Rudser KD, Kim M. PMID: 27777443.
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    69. Quantifying Isoniazid Levels in Small Hair Samples: A Novel Method for Assessing Adherence during the Treatment of Latent and Active Tuberculosis. PLoS One. 2016; 11(5):e0155887. Gerona R, Wen A, Chin AT, Koss CA, Bacchetti P, Metcalfe J, Gandhi M. PMID: 27191185.
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    70. Moderate Alcohol Use and Insulin Action in Chronic Hepatitis C Infection. Dig Dis Sci. 2016 08; 61(8):2417-2425. Burman BE, Bacchetti P, Khalili M. PMID: 27007134.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    71. Enhanced liver fibrosis marker as a noninvasive predictor of mortality in HIV/hepatitis C virus-coinfected women from a multicenter study of women with or at risk for HIV. AIDS. 2016 Mar 13; 30(5):723-9. Peters MG, Bacchetti P, Boylan R, French AL, Tien PC, Plankey MW, Glesby MJ, Augenbraun M, Golub ET, Karim R, Parkes J, Rosenberg W. PMID: 26595542.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    72. Effects of a mindfulness-based weight loss intervention in adults with obesity: A randomized clinical trial. Obesity (Silver Spring). 2016 Apr; 24(4):794-804. Daubenmier J, Moran PJ, Kristeller J, Acree M, Bacchetti P, Kemeny ME, Dallman M, Lustig RH, Grunfeld C, Nixon DF, Milush JM, Goldman V, Laraia B, Laugero KD, Woodhouse L, Epel ES, Hecht FM. PMID: 26955895.
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    73. Reduced reward-driven eating accounts for the impact of a mindfulness-based diet and exercise intervention on weight loss: Data from the SHINE randomized controlled trial. Appetite. 2016 May 01; 100:86-93. Mason AE, Epel ES, Aschbacher K, Lustig RH, Acree M, Kristeller J, Cohn M, Dallman M, Moran PJ, Bacchetti P, Laraia B, Hecht FM, Daubenmier J. PMID: 26867697.
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    74. Gender-Related Risk Factors Improve Mortality Predictive Ability of VACS Index Among HIV-Infected Women. . 2015 Dec 15; 70(5):538-44. Cohen MH, Hotton AL, Hershow RC, Levine A, Bacchetti P, Golub ET, Anastos K, Young M, Gustafson D, Weber KM. PMID: 26284531.
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    75. Short-term administration of disulfiram for reversal of latent HIV infection: a phase 2 dose-escalation study. Lancet HIV. 2015 Dec; 2(12):e520-9. Elliott JH, McMahon JH, Chang CC, Lee SA, Hartogensis W, Bumpus N, Savic R, Roney J, Hoh R, Solomon A, Piatak M, Gorelick RJ, Lifson J, Bacchetti P, Deeks SG, Lewin SR. PMID: 26614966.
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    76. Effects of a mindfulness-based intervention on mindful eating, sweets consumption, and fasting glucose levels in obese adults: data from the SHINE randomized controlled trial. J Behav Med. 2016 Apr; 39(2):201-13. Mason AE, Epel ES, Kristeller J, Moran PJ, Dallman M, Lustig RH, Acree M, Bacchetti P, Laraia BA, Hecht FM, Daubenmier J. PMID: 26563148.
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    77. Using Lopinavir Concentrations in Hair Samples to Assess Treatment Outcomes on Second-Line Regimens Among Asian Children. AIDS Res Hum Retroviruses. 2015 Oct; 31(10):1009-14. Prasitsuebsai W, Kerr SJ, Truong KH, Ananworanich J, Do VC, Nguyen LV, Kurniati N, Kosalaraksa P, Sudjaritruk T, Chokephaibulkit K, Thammajaruk N, Singtoroj T, Teeraananchai S, Horng H, Bacchetti P, Gandhi M, Sohn AH. PMID: 26200586.
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    78. Implementation and Operational Research: Pulling the Network Together: Quasiexperimental Trial of a Patient-Defined Support Network Intervention for Promoting Engagement in HIV Care and Medication Adherence on Mfangano Island, Kenya. . 2015 Aug 01; 69(4):e127-34. Hickey MD, Salmen CR, Omollo D, Mattah B, Fiorella KJ, Geng EH, Bacchetti P, Blat C, Ouma GB, Zoughbie D, Tessler RA, Salmen MR, Campbell H, Gandhi M, Shade S, Njoroge B, Bukusi EA, Cohen CR. PMID: 25984711.
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    79. Impact of Patient Age on Procedure Type for Ulcerative Colitis: A National Study. Dis Colon Rectum. 2015 Aug; 58(8):769-74. Cohan JN, Bacchetti P, Varma MG, Finlayson E. PMID: 26163956.
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    80. Swiss medical centres vary significantly when it comes to outcomes of neonates with a very low gestational age. Acta Paediatr. 2015 Sep; 104(9):872-9. Steurer MA, Adams M, Bacchetti P, Schulzke SM, Roth-Kleiner M, Berger TM, Swiss Neonatal Network . PMID: 26014127.
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    81. Nevirapine Concentration in Hair Samples Is a Strong Predictor of Virologic Suppression in a Prospective Cohort of HIV-Infected Patients. PLoS One. 2015; 10(6):e0129100. Baxi SM, Greenblatt RM, Bacchetti P, Jin C, French AL, Keller MJ, Augenbraun MH, Gange SJ, Liu C, Mack WJ, Gandhi M, Women’s Interagency HIV Study (WIHS) . PMID: 26053176.
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    82. Acute responses to opioidergic blockade as a biomarker of hedonic eating among obese women enrolled in a mindfulness-based weight loss intervention trial. Appetite. 2015 Aug; 91:311-320. Mason AE, Lustig RH, Brown RR, Acree M, Bacchetti P, Moran PJ, Dallman M, Laraia B, Adler N, Hecht FM, Daubenmier J, Epel ES. PMID: 25931433.
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    83. Hair concentrations of antiretrovirals predict viral suppression in HIV-infected pregnant and breastfeeding Ugandan women. AIDS. 2015 Apr 24; 29(7):825-30. Koss CA, Natureeba P, Mwesigwa J, Cohan D, Nzarubara B, Bacchetti P, Horng H, Clark TD, Plenty A, Ruel TD, Achan J, Charlebois ED, Kamya MR, Havlir DV, Gandhi M. PMID: 25985404.
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    84. Outcomes after ileoanal pouch surgery in frail and older adults. J Surg Res. 2015 Oct; 198(2):327-33. Cohan JN, Bacchetti P, Varma MG, Finlayson E. PMID: 25937568.
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    85. Longitudinal Genetic Characterization Reveals That Cell Proliferation Maintains a Persistent HIV Type 1 DNA Pool During Effective HIV Therapy. J Infect Dis. 2015 Aug 15; 212(4):596-607. von Stockenstrom S, Odevall L, Lee E, Sinclair E, Bacchetti P, Killian M, Epling L, Shao W, Hoh R, Ho T, Faria NR, Lemey P, Albert J, Hunt P, Loeb L, Pilcher C, Poole L, Hatano H, Somsouk M, Douek D, Boritz E, Deeks SG, Hecht FM, Palmer S. PMID: 25712966.
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    86. Comparing the novel method of assessing PrEP adherence/exposure using hair samples to other pharmacologic and traditional measures. . 2015 Jan 01; 68(1):13-20. Baxi SM, Liu A, Bacchetti P, Mutua G, Sanders EJ, Kibengo FM, Haberer JE, Rooney J, Hendrix CW, Anderson PL, Huang Y, Priddy F, Gandhi M. PMID: 25296098.
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    87. Tired telomeres: Poor global sleep quality, perceived stress, and telomere length in immune cell subsets in obese men and women. Brain Behav Immun. 2015 Jul; 47:155-62. Prather AA, Gurfein B, Moran P, Daubenmier J, Acree M, Bacchetti P, Sinclair E, Lin J, Blackburn E, Hecht FM, Epel ES. PMID: 25535858.
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    88. Recipient clinical risk factors predominate in possible transfusion-related acute lung injury. Transfusion. 2015 May; 55(5):947-52. Toy P, Bacchetti P, Grimes B, Gajic O, Murphy EL, Winters JL, Gropper MA, Hubmayr RD, Matthay MA, Wilson G, Koenigsberg M, Lee DC, Hirschler NV, Lowell CA, Schuller RM, Gandhi MJ, Norris PJ, Mair DC, Sanchez Rosen R, Looney MR. PMID: 25488517.
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    89. Assessment of HIV antiretroviral therapy adherence by measuring drug concentrations in hair among children in rural Uganda. AIDS Care. 2015; 27(3):327-32. Olds PK, Kiwanuka JP, Nansera D, Huang Y, Bacchetti P, Jin C, Gandhi M, Haberer JE. PMID: 25483955.
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    90. Effect of CD4+ cell count and viral suppression on risk of ischemic stroke in HIV infection. AIDS. 2014 Nov 13; 28(17):2573-7. Chow FC, Bacchetti P, Kim AS, Price RW, Hsue PY. PMID: 25160935.
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    91. Impact of CD4+ lymphocytes and HIV infection on Anti-Müllerian Hormone levels in a large cohort of HIV-infected and HIV-uninfected women. Am J Reprod Immunol. 2015 Mar; 73(3):273-84. Scherzer R, Bacchetti P, Messerlian G, Goderre J, Maki PM, Seifer DB, Anastos K, Karim R, Greenblatt RM. PMID: 25339186.
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    92. Effect of Present-on-Admission (POA) Reporting Accuracy on Hospital Performance Assessments Using Risk-Adjusted Mortality. Health Serv Res. 2015 Jun; 50(3):922-38. Goldman LE, Chu PW, Bacchetti P, Kruger J, Bindman A. PMID: 25285372.
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    93. Elevated rates of intracerebral hemorrhage in individuals from a US clinical care HIV cohort. Neurology. 2014 Nov 04; 83(19):1705-11. Chow FC, He W, Bacchetti P, Regan S, Feske SK, Meigs JB, Grinspoon SK, Triant VA. PMID: 25280902.
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    94. Liver inflammation is a risk factor for prediabetes in at-risk latinos with and without hepatitis C infection. Liver Int. 2015 Jan; 35(1):101-7. Burman BE, Bacchetti P, Ayala CE, Gelman N, Melgar J, Khalili M. PMID: 25156890.
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    95. Antiretroviral concentrations in small hair samples as a feasible marker of adherence in rural Kenya. . 2014 Jul 01; 66(3):311-5. Hickey MD, Salmen CR, Tessler RA, Omollo D, Bacchetti P, Magerenge R, Mattah B, Salmen MR, Zoughbie D, Fiorella KJ, Geng E, Njoroge B, Jin C, Huang Y, Bukusi EA, Cohen CR, Gandhi M. PMID: 24694932.
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    96. Prospective study on the clinical course and outcomes in transfusion-related acute lung injury*. Crit Care Med. 2014 Jul; 42(7):1676-87. Looney MR, Roubinian N, Gajic O, Gropper MA, Hubmayr RD, Lowell CA, Bacchetti P, Wilson G, Koenigsberg M, Lee DC, Wu P, Grimes B, Norris PJ, Murphy EL, Gandhi MJ, Winters JL, Mair DC, Schuller RM, Hirschler NV, Rosen RS, Matthay MA, Toy P, Transfusion-Related Acute Lung Injury Study Group . PMID: 24776608.
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    97. Commentaries on viewpoint: justifying small-n research in scientifically amazing settings: challenging the notion that only "big-n" studies are worthwhile. J Appl Physiol (1985). 2014 May 01; 116(9):1253. Bacchetti P, Shelhamer MJ. PMID: 24789884.
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    98. Reply to Karch et al. J Infect Dis. 2014 Jul 01; 210(1):159-60. Hatano H, Bacchetti P, Hsue PY, Deeks SG. PMID: 24421253.
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    99. Strong relationship between oral dose and tenofovir hair levels in a randomized trial: hair as a potential adherence measure for pre-exposure prophylaxis (PrEP). PLoS One. 2014; 9(1):e83736. Liu AY, Yang Q, Huang Y, Bacchetti P, Anderson PL, Jin C, Goggin K, Stojanovski K, Grant R, Buchbinder SP, Greenblatt RM, Gandhi M. PMID: 24421901.
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    100. Common clinical conditions - age, low BMI, ritonavir use, mild renal impairment - affect tenofovir pharmacokinetics in a large cohort of HIV-infected women. AIDS. 2014 Jan 02; 28(1):59-66. Baxi SM, Greenblatt RM, Bacchetti P, Scherzer R, Minkoff H, Huang Y, Anastos K, Cohen M, Gange SJ, Young M, Shlipak MG, Gandhi M. PMID: 24275255.
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    101. HIV/hepatitis C virus coinfection ameliorates the atherogenic lipoprotein abnormalities of HIV infection. AIDS. 2014 Jan 02; 28(1):49-58. Wheeler AL, Scherzer R, Lee D, Delaney JA, Bacchetti P, Shlipak MG, Sidney S, Grunfeld C, Tien PC, Study of Fat Redistribution and Metabolic Change in HIV Infection (FRAM) . PMID: 24136113.
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    102. A pilot study assessing the safety and latency-reversing activity of disulfiram in HIV-1-infected adults on antiretroviral therapy. Clin Infect Dis. 2014 Mar; 58(6):883-90. Spivak AM, Andrade A, Eisele E, Hoh R, Bacchetti P, Bumpus NN, Emad F, Buckheit R, McCance-Katz EF, Lai J, Kennedy M, Chander G, Siliciano RF, Siliciano JD, Deeks SG. PMID: 24336828.
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    103. The HIV-1 reservoir in eight patients on long-term suppressive antiretroviral therapy is stable with few genetic changes over time. Proc Natl Acad Sci U S A. 2013 Dec 17; 110(51):E4987-96. Josefsson L, von Stockenstrom S, Faria NR, Sinclair E, Bacchetti P, Killian M, Epling L, Tan A, Ho T, Lemey P, Shao W, Hunt PW, Somsouk M, Wylie W, Douek DC, Loeb L, Custer J, Hoh R, Poole L, Deeks SG, Hecht F, Palmer S. PMID: 24277811.
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    104. Short communication: A low-cost method for analyzing nevirapine levels in hair as a marker of adherence in resource-limited settings. AIDS Res Hum Retroviruses. 2014 Jan; 30(1):25-8. Gandhi M, Yang Q, Bacchetti P, Huang Y. PMID: 24164410.
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    105. Association of multiple sclerosis susceptibility variants and early attack location in the CNS. PLoS One. 2013; 8(10):e75565. Mowry EM, Carey RF, Blasco MR, Pelletier J, Duquette P, Villoslada P, Malikova I, Roger E, Kinkel RP, McDonald J, Bacchetti P, Waubant E. PMID: 24130718.
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    106. Prospective antiretroviral treatment of asymptomatic, HIV-1 infected controllers. PLoS Pathog. 2013; 9(10):e1003691. Hatano H, Yukl SA, Ferre AL, Graf EH, Somsouk M, Sinclair E, Abdel-Mohsen M, Liegler T, Harvill K, Hoh R, Palmer S, Bacchetti P, Hunt PW, Martin JN, McCune JM, Tracy RP, Busch MP, O'Doherty U, Shacklett BL, Wong JK, Deeks SG. PMID: 24130489.
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    107. Multiple sclerosis susceptibility genes: associations with relapse severity and recovery. PLoS One. 2013; 8(10):e75416. Mowry EM, Carey RF, Blasco MR, Pelletier J, Duquette P, Villoslada P, Malikova I, Roger E, Kinkel RP, McDonald J, Bacchetti P, Waubant E. PMID: 24130709.
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    108. Increase in 2-long terminal repeat circles and decrease in D-dimer after raltegravir intensification in patients with treated HIV infection: a randomized, placebo-controlled trial. J Infect Dis. 2013 Nov 01; 208(9):1436-42. Hatano H, Strain MC, Scherzer R, Bacchetti P, Wentworth D, Hoh R, Martin JN, McCune JM, Neaton JD, Tracy RP, Hsue PY, Richman DD, Deeks SG. PMID: 23975885.
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    109. Cortisol patterns are associated with T cell activation in HIV. PLoS One. 2013; 8(7):e63429. Patterson S, Moran P, Epel E, Sinclair E, Kemeny ME, Deeks SG, Bacchetti P, Acree M, Epling L, Kirschbaum C, Hecht FM. PMID: 23922644.
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    110. Antiretroviral therapy initiated within 6 months of HIV infection is associated with lower T-cell activation and smaller HIV reservoir size. J Infect Dis. 2013 Oct 15; 208(8):1202-11. Jain V, Hartogensis W, Bacchetti P, Hunt PW, Hatano H, Sinclair E, Epling L, Lee TH, Busch MP, McCune JM, Pilcher CD, Hecht FM, Deeks SG. PMID: 23852127.
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    111. Small sample size is not the real problem. Nat Rev Neurosci. 2013 Aug; 14(8):585. Bacchetti P. PMID: 23820775.
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    112. Rituximab in relapsing and progressive forms of multiple sclerosis: a systematic review. PLoS One. 2013; 8(7):e66308. Castillo-Trivino T, Braithwaite D, Bacchetti P, Waubant E. PMID: 23843952.
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    113. The association of self-perception of body fat changes and quality of life in the Women's Interagency HIV Study. AIDS Care. 2013; 25(12):1544-50. Plankey M, Bacchetti P, Jin C, Dass-Brailsford P, Gustafson D, Cohen MH, Karim R, Yin M, Tien PC. PMID: 23656440.
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    114. Risk factors and outcomes in transfusion-associated circulatory overload. Am J Med. 2013 Apr; 126(4):357.e29-38. Murphy EL, Kwaan N, Looney MR, Gajic O, Hubmayr RD, Gropper MA, Koenigsberg M, Wilson G, Matthay M, Bacchetti P, Toy P, TRALI Study Group . PMID: 23357450.
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    115. Targeting of conserved gag-epitopes in early HIV infection is associated with lower plasma viral load and slower CD4(+) T cell depletion. AIDS Res Hum Retroviruses. 2013 Mar; 29(3):602-12. Perez CL, Milush JM, Buggert M, Eriksson EM, Larsen MV, Liegler T, Hartogensis W, Bacchetti P, Lund O, Hecht FM, Nixon DF, Karlsson AC. PMID: 23140171.
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    116. Racial/ethnic differences in spontaneous HCV clearance in HIV infected and uninfected women. Dig Dis Sci. 2013 May; 58(5):1341-8. Sarkar M, Bacchetti P, Tien P, Mileti E, French AL, Edlin BR, Keller M, Seaberg E, Nowicki MJ, Young M, Peters MG. PMID: 23179159.
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    117. Insulin sensitivity and variability in hepatitis C virus infection using direct measurement. Dig Dis Sci. 2013 Apr; 58(4):1141-8. Mukhtar NA, Bacchetti P, Ayala CE, Melgar J, Christensen S, Maher JJ, Khalili M. PMID: 23086116.
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    118. Lower liver-related death in African-American women with human immunodeficiency virus/hepatitis C virus coinfection, compared to Caucasian and Hispanic women. Hepatology. 2012 Nov; 56(5):1699-705. Sarkar M, Bacchetti P, French AL, Tien P, Glesby MJ, Nowicki M, Plankey M, Gange S, Sharp G, Minkoff H, Peters MG, Women's Interagency HIV Study (WIHS) . PMID: 22618868.
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    119. A single-nucleotide polymorphism in CYP2B6 leads to >3-fold increases in efavirenz concentrations in plasma and hair among HIV-infected women. J Infect Dis. 2012 Nov; 206(9):1453-61. Gandhi M, Greenblatt RM, Bacchetti P, Jin C, Huang Y, Anastos K, Cohen M, Dehovitz JA, Sharp GB, Gange SJ, Liu C, Hanson SC, Aouizerat B, Women's Interagency HIV Study . PMID: 22927450.
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    120. Being 'underpowered' does not make a study unethical. Stat Med. 2012 Dec 20; 31(29):4138-9; author reply 4140-1. Bacchetti P, McCulloch C, Segal MR. PMID: 22763861.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    121. The calm mouse: an animal model of stress reduction. Mol Med. 2012 May 09; 18:606-17. Gurfein BT, Stamm AW, Bacchetti P, Dallman MF, Nadkarni NA, Milush JM, Touma C, Palme R, Di Borgo CP, Fromentin G, Lown-Hecht R, Konsman JP, Acree M, Premenko-Lanier M, Darcel N, Hecht FM, Nixon DF. PMID: 22398685.
      View in: PubMed   Mentions: 17     Fields:    Translation:Animals
    122. Hematopoietic precursor cells isolated from patients on long-term suppressive HIV therapy did not contain HIV-1 DNA. J Infect Dis. 2012 Jul 01; 206(1):28-34. Josefsson L, Eriksson S, Sinclair E, Ho T, Killian M, Epling L, Shao W, Lewis B, Bacchetti P, Loeb L, Custer J, Poole L, Hecht FM, Palmer S. PMID: 22536001.
      View in: PubMed   Mentions: 49     Fields:    Translation:HumansCells
    123. Impact of insulin resistance on HCV treatment response and impact of HCV treatment on insulin sensitivity using direct measurements of insulin action. Diabetes Care. 2012 May; 35(5):1090-4. Brandman D, Bacchetti P, Ayala CE, Maher JJ, Khalili M. PMID: 22399695.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCellsCTClinical Trials
    124. Fetal outcomes in pregnancies complicated by intrahepatic cholestasis of pregnancy in a Northern California cohort. PLoS One. 2012; 7(3):e28343. Rook M, Vargas J, Caughey A, Bacchetti P, Rosenthal P, Bull L. PMID: 22403605.
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    125. Changes in stress, eating, and metabolic factors are related to changes in telomerase activity in a randomized mindfulness intervention pilot study. Psychoneuroendocrinology. 2012 Jul; 37(7):917-28. Daubenmier J, Lin J, Blackburn E, Hecht FM, Kristeller J, Maninger N, Kuwata M, Bacchetti P, Havel PJ, Epel E. PMID: 22169588.
      View in: PubMed   Mentions: 50     Fields:    Translation:Humans
    126. Transfusion-related acute lung injury: incidence and risk factors. Blood. 2012 Feb 16; 119(7):1757-67. Toy P, Gajic O, Bacchetti P, Looney MR, Gropper MA, Hubmayr R, Lowell CA, Norris PJ, Murphy EL, Weiskopf RB, Wilson G, Koenigsberg M, Lee D, Schuller R, Wu P, Grimes B, Gandhi MJ, Winters JL, Mair D, Hirschler N, Sanchez Rosen R, Matthay MA, TRALI Study Group . PMID: 22117051.
      View in: PubMed   Mentions: 119     Fields:    Translation:HumansPHPublic Health
    127. Association of low level viremia with inflammation and mortality in HIV-infected adults. PLoS One. 2011; 6(11):e26320. Eastburn A, Scherzer R, Zolopa AR, Benson C, Tracy R, Do T, Bacchetti P, Shlipak M, Grunfeld C, Tien PC. PMID: 22073156.
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    128. Insulin resistance and cognition among HIV-infected and HIV-uninfected adult women: the Women's Interagency HIV Study. AIDS Res Hum Retroviruses. 2012 May; 28(5):447-53. Valcour V, Maki P, Bacchetti P, Anastos K, Crystal H, Young M, Mack WJ, Cohen M, Golub ET, Tien PC. PMID: 21878059.
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    129. Association of increased upper trunk and decreased leg fat with 2-h glucose in control and HIV-infected persons. Diabetes Care. 2011 Nov; 34(11):2448-53. Kosmiski LA, Scherzer R, Heymsfield SB, Rimland D, Simberkoff MS, Sidney S, Shlipak MG, Bacchetti P, Biggs ML, Grunfeld C, Study of Fat Redistribution and Metabolic Change in HIV Infection (FRAM) . PMID: 21926283.
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    130. Decreased limb muscle and increased central adiposity are associated with 5-year all-cause mortality in HIV infection. AIDS. 2011 Jul 17; 25(11):1405-14. Scherzer R, Heymsfield SB, Lee D, Powderly WG, Tien PC, Bacchetti P, Shlipak MG, Grunfeld C, Study of Fat Redistribution and Metabolic Change in HIV Infection (FRAM) . PMID: 21572308.
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    131. Breaking free of sample size dogma to perform innovative translational research. Sci Transl Med. 2011 Jun 15; 3(87):87ps24. Bacchetti P, Deeks SG, McCune JM. PMID: 21677197.
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    132. Progression of biopsy-measured liver fibrosis in untreated patients with hepatitis C infection: non-Markov multistate model analysis. PLoS One. 2011; 6(5):e20104. Bacchetti P, Boylan R, Astemborski J, Shen H, Mehta SH, Thomas DL, Terrault NA, Monto A. PMID: 21637766.
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    133. Atazanavir concentration in hair is the strongest predictor of outcomes on antiretroviral therapy. Clin Infect Dis. 2011 May; 52(10):1267-75. Gandhi M, Ameli N, Bacchetti P, Anastos K, Gange SJ, Minkoff H, Young M, Milam J, Cohen MH, Sharp GB, Huang Y, Greenblatt RM. PMID: 21507924.
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    134. Differential persistence of transmitted HIV-1 drug resistance mutation classes. J Infect Dis. 2011 Apr 15; 203(8):1174-81. Jain V, Sucupira MC, Bacchetti P, Hartogensis W, Diaz RS, Kallas EG, Janini LM, Liegler T, Pilcher CD, Grant RM, Cortes R, Deeks SG, Hecht FM. PMID: 21451005.
      View in: PubMed   Mentions: 59     Fields:    Translation:HumansCells
    135. Effect of emergency department crowding on pneumonia admission care components. Am J Manag Care. 2011 Apr; 17(4):269-78. Fee C, Weber EJ, Bacchetti P, Maak CA. PMID: 21615197.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    136. Age-related skeletal muscle decline is similar in HIV-infected and uninfected individuals. J Gerontol A Biol Sci Med Sci. 2011 Mar; 66(3):332-40. Yarasheski KE, Scherzer R, Kotler DP, Dobs AS, Tien PC, Lewis CE, Kronmal RA, Heymsfield SB, Bacchetti P, Grunfeld C, Study of Fat Redistribution and Metabolic Change in HIV Infection (FRAM) . PMID: 21310810.
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    137. Sexual serosorting among women with or at risk of HIV infection. AIDS Behav. 2011 Jan; 15(1):9-15. Liu C, Hu H, Goparaju L, Plankey M, Bacchetti P, Weber K, Correa N, Nowicki M, Wilson TE. PMID: 20490909.
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    138. Transmitted drug resistance in persons with acute/early HIV-1 in San Francisco, 2002-2009. PLoS One. 2010 Dec 10; 5(12):e15510. Jain V, Liegler T, Vittinghoff E, Hartogensis W, Bacchetti P, Poole L, Loeb L, Pilcher CD, Grant RM, Deeks SG, Hecht FM. PMID: 21170322.
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    139. Trauma, transfusions, and use of recombinant factor VIIa: A multicenter case registry report of 380 patients from the Western Trauma Association. J Am Coll Surg. 2011 Jan; 212(1):87-95. Knudson MM, Cohen MJ, Reidy R, Jaeger S, Bacchetti P, Jin C, Wade CE, Holcomb JB. PMID: 21115374.
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    140. Inflammation and mortality in HIV-infected adults: analysis of the FRAM study cohort. . 2010 Nov; 55(3):316-22. Tien PC, Choi AI, Zolopa AR, Benson C, Tracy R, Scherzer R, Bacchetti P, Shlipak M, Grunfeld C. PMID: 20581689.
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    141. Associations of antiretroviral drug use and HIV-specific risk factors with carotid intima-media thickness. AIDS. 2010 Sep 10; 24(14):2201-9. Delaney JA, Scherzer R, Biggs ML, Shliplak MG, Polak JF, Currier JS, Kronmal RA, Wanke C, Bacchetti P, O'leary D, Tien PC, Grunfeld C. PMID: 20671544.
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    142. Cystatin C, albuminuria, and 5-year all-cause mortality in HIV-infected persons. Am J Kidney Dis. 2010 Nov; 56(5):872-82. Choi A, Scherzer R, Bacchetti P, Tien PC, Saag MS, Gibert CL, Szczech LA, Grunfeld C, Shlipak MG. PMID: 20709438.
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    143. Regional adipose tissue measured by MRI over 5 years in HIV-infected and control participants indicates persistence of HIV-associated lipoatrophy. AIDS. 2010 Jul 17; 24(11):1717-26. Grunfeld C, Saag M, Cofrancesco J, Lewis CE, Kronmal R, Heymsfield S, Tien PC, Bacchetti P, Shlipak M, Scherzer R, Study of Fat Redistribution and Metabolic Change in HIV Infection (FRAM) . PMID: 20502316.
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    144. Comparison of surrogate and direct measurement of insulin resistance in chronic hepatitis C virus infection: impact of obesity and ethnicity. Hepatology. 2010 Jul; 52(1):38-46. Lam KD, Bacchetti P, Abbasi F, Ayala CE, Loeb SM, Shah V, Wen MJ, Reaven GM, Maher JJ, Khalili M. PMID: 20578127.
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    145. Intermuscular adipose tissue and metabolic associations in HIV infection. Obesity (Silver Spring). 2011 Feb; 19(2):283-91. Scherzer R, Shen W, Heymsfield SB, Lewis CE, Kotler DP, Punyanitya M, Bacchetti P, Shlipak MG, Grunfeld C, Study of Fat Redistribution and Metabolic Change in HIV Infection (FRAM) . PMID: 20539305.
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    146. Frequently repeated glucose measurements overestimate the incidence of inpatient hypoglycemia and severe hyperglycemia. J Diabetes Sci Technol. 2010 May 01; 4(3):577-82. Weinberg ME, Bacchetti P, Rushakoff RJ. PMID: 20513323.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    147. Vitamin D status is associated with relapse rate in pediatric-onset multiple sclerosis. Ann Neurol. 2010 May; 67(5):618-24. Mowry EM, Krupp LB, Milazzo M, Chabas D, Strober JB, Belman AL, McDonald JC, Oksenberg JR, Bacchetti P, Waubant E. PMID: 20437559.
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    148. HIV RNA level in early infection is predicted by viral load in the transmission source. AIDS. 2010 Apr 24; 24(7):941-5. Hecht FM, Hartogensis W, Bragg L, Bacchetti P, Atchison R, Grant R, Barbour J, Deeks SG. PMID: 20168202.
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    149. Differences in presentation and progression between severe FIC1 and BSEP deficiencies. J Hepatol. 2010 Jul; 53(1):170-8. Pawlikowska L, Strautnieks S, Jankowska I, Czubkowski P, Emerick K, Antoniou A, Wanty C, Fischler B, Jacquemin E, Wali S, Blanchard S, Nielsen IM, Bourke B, McQuaid S, Lacaille F, Byrne JA, van Eerde AM, Kolho KL, Klomp L, Houwen R, Bacchetti P, Lobritto S, Hupertz V, McClean P, Mieli-Vergani G, Shneider B, Nemeth A, Sokal E, Freimer NB, Knisely AS, Rosenthal P, Whitington PF, Pawlowska J, Thompson RJ, Bull LN. PMID: 20447715.
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    150. Current sample size conventions: flaws, harms, and alternatives. BMC Med. 2010 Mar 22; 8:17. Bacchetti P. PMID: 20307281.
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    151. Non-Markov multistate modeling using time-varying covariates, with application to progression of liver fibrosis due to hepatitis C following liver transplant. Int J Biostat. 2010 Feb 20; 6(1):Article 7. Bacchetti P, Boylan RD, Terrault NA, Monto A, Berenguer M. PMID: 20305705.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    152. Association of HIV infection, demographic and cardiovascular risk factors with all-cause mortality in the recent HAART era. . 2010 Jan; 53(1):102-6. Cockerham L, Scherzer R, Zolopa A, Rimland D, Lewis CE, Bacchetti P, Grunfeld C, Shlipak M, Tien PC. PMID: 19738484.
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    153. Citalopram provides little or no benefit in nondepressed patients with irritable bowel syndrome. Clin Gastroenterol Hepatol. 2010 Jan; 8(1):42-48.e1. Ladabaum U, Sharabidze A, Levin TR, Zhao WK, Chung E, Bacchetti P, Jin C, Grimes B, Pepin CJ. PMID: 19765674.
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    154. Preclinical atherosclerosis due to HIV infection: carotid intima-medial thickness measurements from the FRAM study. AIDS. 2009 Sep 10; 23(14):1841-9. Grunfeld C, Delaney JA, Wanke C, Currier JS, Scherzer R, Biggs ML, Tien PC, Shlipak MG, Sidney S, Polak JF, O'Leary D, Bacchetti P, Kronmal RA. PMID: 19455012.
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    155. White/black racial differences in risk of end-stage renal disease and death. Am J Med. 2009 Jul; 122(7):672-8. Choi AI, Rodriguez RA, Bacchetti P, Bertenthal D, Hernandez GT, O'Hare AM. PMID: 19559170.
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    156. HIV viremia and changes in kidney function. AIDS. 2009 Jun 01; 23(9):1089-96. Longenecker CT, Scherzer R, Bacchetti P, Lewis CE, Grunfeld C, Shlipak MG. PMID: 19352136.
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    157. Nonnucleoside reverse transcriptase inhibitor pharmacokinetics in a large unselected cohort of HIV-infected women. . 2009 Apr 15; 50(5):482-91. Gandhi M, Benet LZ, Bacchetti P, Kalinowski A, Anastos K, Wolfe AR, Young M, Cohen M, Minkoff H, Gange SJ, Greenblatt RM, Women's Interagency HIV Study . PMID: 19408353.
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    158. Clinical predictors of early second event in patients with clinically isolated syndrome. J Neurol. 2009 Jul; 256(7):1061-6. Mowry EM, Pesic M, Grimes B, Deen SR, Bacchetti P, Waubant E. PMID: 19252775.
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    159. Protease inhibitor levels in hair strongly predict virologic response to treatment. AIDS. 2009 Feb 20; 23(4):471-8. Gandhi M, Ameli N, Bacchetti P, Gange SJ, Anastos K, Levine A, Hyman CL, Cohen M, Young M, Huang Y, Greenblatt RM, Women's Interagency HIV Study (WIHS) . PMID: 19165084.
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    160. Estimating complex multi-state misclassification rates for biopsy-measured liver fibrosis in patients with hepatitis C. Int J Biostat. 2009; 5(1):Article 5. Bacchetti P, Boylan R. PMID: 20104258.
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    161. Reporting bias in drug trials submitted to the Food and Drug Administration: review of publication and presentation. PLoS Med. 2008 Nov 25; 5(11):e217; discussion e217. Rising K, Bacchetti P, Bero L. PMID: 19067477.
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    162. Comparison of dual-energy X-ray absorptiometry and magnetic resonance imaging-measured adipose tissue depots in HIV-infected and control subjects. Am J Clin Nutr. 2008 Oct; 88(4):1088-96. Scherzer R, Shen W, Bacchetti P, Kotler D, Lewis CE, Shlipak MG, Punyanitya M, Heymsfield SB, Grunfeld C, Study of Fat Redistribution Metabolic Change in HIV Infection . PMID: 18842798.
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    163. Publication of clinical trials supporting successful new drug applications: a literature analysis. PLoS Med. 2008 Sep 23; 5(9):e191. Lee K, Bacchetti P, Sim I. PMID: 18816163.
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    164. Fibrosis progression in African Americans and Caucasian Americans with chronic hepatitis C. Clin Gastroenterol Hepatol. 2008 Dec; 6(12):1403-11. Terrault NA, Im K, Boylan R, Bacchetti P, Kleiner DE, Fontana RJ, Hoofnagle JH, Belle SH, VIRAHEP-C Study Group . PMID: 19081528.
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    165. Self-perception of body fat changes and HAART adherence in the Women's Interagency HIV Study. AIDS Behav. 2009 Feb; 13(1):53-9. Plankey M, Bacchetti P, Jin C, Grimes B, Hyman C, Cohen M, Howard AA, Tien PC. PMID: 18688706.
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    166. Simple anthropometric measures correlate with metabolic risk indicators as strongly as magnetic resonance imaging-measured adipose tissue depots in both HIV-infected and control subjects. Am J Clin Nutr. 2008 Jun; 87(6):1809-17. Scherzer R, Shen W, Bacchetti P, Kotler D, Lewis CE, Shlipak MG, Heymsfield SB, Grunfeld C, Study of Fat Redistribution Metabolic Change in HIV Infection (FRAM) . PMID: 18541572.
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    167. Regional adipose tissue and elevations in serum aminotransferases in HIV-infected individuals. . 2008 Jun 01; 48(2):169-76. Tien PC, Kotler DP, Overton ET, Lewis CE, Rimland D, Bacchetti P, Scherzer R, Gripshover B, Study of Fat Redistribution and Metabolic Change in HIV Infection Investigators . PMID: 18285711.
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    168. Simple, defensible sample sizes based on cost efficiency. Biometrics. 2008 Jun; 64(2):577-85; discussion 586-94. Bacchetti P, McCulloch CE, Segal MR. PMID: 18482055.
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    169. Association of HIV infection and HIV/HCV coinfection with C-reactive protein levels: the fat redistribution and metabolic change in HIV infection (FRAM) study. . 2008 Jun 01; 48(2):142-8. Reingold J, Wanke C, Kotler D, Lewis C, Tracy R, Heymsfield S, Tien P, Bacchetti P, Scherzer R, Grunfeld C, Shlipak M. PMID: 18344877.
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    170. The associations of regional adipose tissue with lipid and lipoprotein levels in HIV-infected men. . 2008 May 01; 48(1):44-52. Wohl D, Scherzer R, Heymsfield S, Simberkoff M, Sidney S, Bacchetti P, Grunfeld C, FRAM Study Investigators . PMID: 18360291.
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    171. Regional adipose tissue and lipid and lipoprotein levels in HIV-infected women. . 2008 May 01; 48(1):35-43. Currier J, Scherzer R, Bacchetti P, Heymsfield S, Lee D, Sidney S, Tien PC, Fat Redistribution and Metabolic Changes in HIV Infection Study Investigators . PMID: 18197118.
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    172. Are the uninsured responsible for the increase in emergency department visits in the United States? Ann Emerg Med. 2008 Aug; 52(2):108-15. Weber EJ, Showstack JA, Hunt KA, Colby DC, Grimes B, Bacchetti P, Callaham ML. PMID: 18407374.
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    173. Association of antiretroviral therapy with fibrinogen levels in HIV-infection. AIDS. 2008 Mar 30; 22(6):707-15. Madden E, Lee G, Kotler DP, Wanke C, Lewis CE, Tracy R, Heymsfield S, Shlipak MG, Bacchetti P, Scherzer R, Grunfeld C. PMID: 18356600.
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    174. Growth hormone enhances thymic function in HIV-1-infected adults. J Clin Invest. 2008 Mar; 118(3):1085-98. Napolitano LA, Schmidt D, Gotway MB, Ameli N, Filbert EL, Ng MM, Clor JL, Epling L, Sinclair E, Baum PD, Li K, Killian ML, Bacchetti P, McCune JM. PMID: 18292808.
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    175. Influence of cannabis use on severity of hepatitis C disease. Clin Gastroenterol Hepatol. 2008 Jan; 6(1):69-75. Ishida JH, Peters MG, Jin C, Louie K, Tan V, Bacchetti P, Terrault NA. PMID: 18166478.
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    176. Low rates of antiretroviral therapy among HIV-infected patients with chronic kidney disease. Clin Infect Dis. 2007 Dec 15; 45(12):1633-9. Choi AI, Rodriguez RA, Bacchetti P, Volberding PA, Havlir D, Bertenthal D, Bostrom A, O'Hare AM. PMID: 18190326.
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    177. Estimating past hepatitis C infection risk from reported risk factor histories: implications for imputing age of infection and modeling fibrosis progression. BMC Infect Dis. 2007 Dec 10; 7:145. Bacchetti P, Tien PC, Seaberg EC, O'Brien TR, Augenbraun MH, Kral AH, Busch MP, Edlin BR. PMID: 18070362.
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    178. Cystatin C level as a marker of kidney function in human immunodeficiency virus infection: the FRAM study. Arch Intern Med. 2007 Nov 12; 167(20):2213-9. Odden MC, Scherzer R, Bacchetti P, Szczech LA, Sidney S, Grunfeld C, Shlipak MG. PMID: 17998494.
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    179. Association of upper trunk and visceral adipose tissue volume with insulin resistance in control and HIV-infected subjects in the FRAM study. . 2007 Nov 01; 46(3):283-90. Grunfeld C, Rimland D, Gibert CL, Powderly WG, Sidney S, Shlipak MG, Bacchetti P, Scherzer R, Haffner S, Heymsfield SB. PMID: 18167644.
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    180. Effect of emergency department crowding on time to antibiotics in patients admitted with community-acquired pneumonia. Ann Emerg Med. 2007 Nov; 50(5):501-9, 509.e1. Fee C, Weber EJ, Maak CA, Bacchetti P. PMID: 17913300.
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    181. Racial differences in end-stage renal disease rates in HIV infection versus diabetes. J Am Soc Nephrol. 2007 Nov; 18(11):2968-74. Choi AI, Rodriguez RA, Bacchetti P, Bertenthal D, Volberding PA, O'Hare AM. PMID: 17942954.
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    182. Relationship of fat distribution with adipokines in human immunodeficiency virus infection. J Clin Endocrinol Metab. 2008 Jan; 93(1):216-24. Kosmiski LA, Bacchetti P, Kotler DP, Heymsfield SB, Lewis CE, Shlipak MG, Scherzer R, Grunfeld C. PMID: 17940113.
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    183. Age affects outcomes in chronic kidney disease. J Am Soc Nephrol. 2007 Oct; 18(10):2758-65. O'Hare AM, Choi AI, Bertenthal D, Bacchetti P, Garg AX, Kaufman JS, Walter LC, Mehta KM, Steinman MA, Allon M, McClellan WM, Landefeld CS. PMID: 17855638.
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    184. Modeling insertional mutagenesis using gene length and expression in murine embryonic stem cells. PLoS One. 2007 Jul 18; 2(7):e617. Nord AS, Vranizan K, Tingley W, Zambon AC, Hanspers K, Fong LG, Hu Y, Bacchetti P, Ferrin TE, Babbitt PC, Doniger SW, Skarnes WC, Young SG, Conklin BR. PMID: 17637833.
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    185. Transfusion-related acute lung injury: a case-control pilot study of risk factors. Am J Clin Pathol. 2007 Jul; 128(1):128-34. Sanchez R, Bacchetti P, Toy P. PMID: 17580280.
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    186. Factors associated with findings of published trials of drug-drug comparisons: why some statins appear more efficacious than others. PLoS Med. 2007 Jun; 4(6):e184. Bero L, Oostvogel F, Bacchetti P, Lee K. PMID: 17550302.
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    187. Association between hepatitis C virus coinfection and regional adipose tissue volume in HIV-infected men and women. . 2007 May 01; 45(1):60-5. Tien PC, Bacchetti P, Gripshover B, Overton ET, Rimland D, Kotler D, Fat Redistribution and Metabolic Change in HIV Infection Study Investigators . PMID: 17356466.
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    188. Geography matters: relationships among urban residential segregation, dialysis facilities, and patient outcomes. Ann Intern Med. 2007 Apr 03; 146(7):493-501. Rodriguez RA, Sen S, Mehta K, Moody-Ayers S, Bacchetti P, O'Hare AM. PMID: 17404351.
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    189. The impact of highly active antiretroviral therapy on non-AIDS-defining cancers among adults with AIDS. Am J Epidemiol. 2007 May 15; 165(10):1143-53. Hessol NA, Pipkin S, Schwarcz S, Cress RD, Bacchetti P, Scheer S. PMID: 17344204.
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    190. Dehydroepiandrosterone (DHEA) effects on HIV replication and host immunity: a randomized placebo-controlled study. AIDS Res Hum Retroviruses. 2007 Jan; 23(1):77-85. Abrams DI, Shade SB, Couey P, McCune JM, Lo J, Bacchetti P, Chang B, Epling L, Liegler T, Grant RM. PMID: 17263636.
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    191. Effects of human immunodeficiency virus on protracted amenorrhea and ovarian dysfunction. Obstet Gynecol. 2006 Dec; 108(6):1423-31. Cejtin HE, Kalinowski A, Bacchetti P, Taylor RN, Watts DH, Kim S, Massad LS, Preston-Martin S, Anastos K, Moxley M, Minkoff HL. PMID: 17138776.
      View in: PubMed   Mentions: 26     Fields:    Translation:Humans
    192. Quantifying smoking cessation outcomes: from The Women's Initiative for Nonsmoking Study (X): methodological implications. Nurs Res. 2006 Jul-Aug; 55(4):292-7. Oka RK, Katapodi MC, Lim JW, Bacchetti P, Froelicher ES. PMID: 16849982.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    193. Predictors of publication: characteristics of submitted manuscripts associated with acceptance at major biomedical journals. Med J Aust. 2006 Jun 19; 184(12):621-6. Lee KP, Boyd EA, Holroyd-Leduc JM, Bacchetti P, Bero LA. PMID: 16803442.
      View in: PubMed   Mentions: 33     Fields:    Translation:Humans
    194. Herpes simplex virus infection in women in the WIHS: epidemiology and effect of antiretroviral therapy on clinical manifestations. AIDS. 2006 Apr 24; 20(7):1051-8. Ameli N, Bacchetti P, Morrow RA, Hessol NA, Wilkin T, Young M, Cohen M, Minkoff H, Gange SJ, Greenblatt RM. PMID: 16603858.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    195. Insulin dynamics predict body mass index and z-score response to insulin suppression or sensitization pharmacotherapy in obese children. J Pediatr. 2006 Jan; 148(1):23-9. Lustig RH, Mietus-Snyder ML, Bacchetti P, Lazar AA, Velasquez-Mieyer PA, Christensen ML. PMID: 16423593.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCTClinical Trials
    196. Management of hepatitis C-infected liver transplant recipients at large North American centres: changes in recent years. Clin Transplant. 2006 Jan-Feb; 20(1):1-9. Khalili M, Vardanian AJ, Hamerski CM, Wang R, Bacchetti P, Roberts JP, Terrault NA. PMID: 16556146.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    197. Increased circulating interleukin-7 levels in HIV-1-infected women. . 2005 Dec 15; 40(5):581-4. Napolitano LA, Burt TD, Bacchetti P, Barrón Y, French AL, Kovacs A, Anastos K, Young M, McCune JM, Greenblatt RM. PMID: 16284535.
      View in: PubMed   Mentions:
    198. Eligibility criteria for HIV clinical trials and generalizability of results: the gap between published reports and study protocols. AIDS. 2005 Nov 04; 19(16):1885-96. Gandhi M, Ameli N, Bacchetti P, Sharp GB, French AL, Young M, Gange SJ, Anastos K, Holman S, Levine A, Greenblatt RM. PMID: 16227797.
      View in: PubMed   Mentions: 43     Fields:    Translation:Humans
    199. Fat distribution in men with HIV infection. . 2005 Oct 01; 40(2):121-31. Bacchetti P, Gripshover B, Grunfeld C, Heymsfield S, McCreath H, Osmond D, Saag M, Scherzer R, Shlipak M, Tien P, Study of Fat Redistribution and Metabolic Change in HIV Infection (FRAM) . PMID: 16186728.
      View in: PubMed   Mentions:
    200. Clinic-based study of family history of vascular risk factors and migraine. J Headache Pain. 2005 Oct; 6(5):412-6. Yoon G, Baggaley S, Bacchetti P, Fu YH, Digre KB, Ptácek LJ. PMID: 16362715.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    201. Enrichment of activated monocytes in cerebrospinal fluid during antiretroviral therapy. AIDS. 2005 Sep 02; 19(13):1351-9. Neuenburg JK, Furlan S, Bacchetti P, Price RW, Grant RM. PMID: 16103765.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    202. Low ankle-brachial index associated with rise in creatinine level over time: results from the atherosclerosis risk in communities study. Arch Intern Med. 2005 Jul 11; 165(13):1481-5. O'Hare AM, Rodriguez RA, Bacchetti P. PMID: 16009862.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    203. Evaluation of the portable infrared pupillometer. Neurosurgery. 2005 Jul; 57(1):198-203; discussion 198-203. Du R, Meeker M, Bacchetti P, Larson MD, Holland MC, Manley GT. PMID: 15987563.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    204. Frequency of trigeminal nerve injuries following third molar removal. J Oral Maxillofac Surg. 2005 Jun; 63(6):732-5; discussion 736. Robert RC, Bacchetti P, Pogrel MA. PMID: 15944965.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    205. Racial and etiopathologic dichotomies in insulin hypersecretion and resistance in obese children. J Pediatr. 2005 Apr; 146(4):474-81. Preeyasombat C, Bacchetti P, Lazar AA, Lustig RH. PMID: 15812449.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    206. Physician predictors of mammographic accuracy. J Natl Cancer Inst. 2005 Mar 02; 97(5):358-67. Smith-Bindman R, Chu P, Miglioretti DL, Quale C, Rosenberg RD, Cutter G, Geller B, Bacchetti P, Sickles EA, Kerlikowske K. PMID: 15741572.
      View in: PubMed   Mentions: 46     Fields:    Translation:Humans
    207. Pupil examination: validity and clinical utility of an automated pupillometer. J Neurosci Nurs. 2005 Feb; 37(1):34-40. Meeker M, Du R, Bacchetti P, Privitera CM, Larson MD, Holland MC, Manley G. PMID: 15794443.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCTClinical Trials
    208. The impact of Medicaid managed care on hospitalizations for ambulatory care sensitive conditions. Health Serv Res. 2005 Feb; 40(1):19-38. Bindman AB, Chattopadhyay A, Osmond DH, Huen W, Bacchetti P. PMID: 15663700.
      View in: PubMed   Mentions: 32     Fields:    Translation:Humans
    209. Uncertainty due to model choice in variant Creutzfeldt-Jakob disease projections. Stat Med. 2005 Jan 15; 24(1):83-93. Bacchetti P. PMID: 15515116.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimals
    210. Ethics and sample size. Am J Epidemiol. 2005 Jan 15; 161(2):105-10. Bacchetti P, Wolf LE, Segal MR, McCulloch CE. PMID: 15632258.
      View in: PubMed   Mentions: 28     Fields:    Translation:Humans
    211. Serum sodium predicts mortality in patients listed for liver transplantation. Hepatology. 2005 Jan; 41(1):32-9. Biggins SW, Rodriguez HJ, Bacchetti P, Bass NM, Roberts JP, Terrault NA. PMID: 15690479.
      View in: PubMed   Mentions: 82     Fields:    Translation:Humans
    212. Association between syphilis, antibodies to herpes simplex virus type 2, and recreational drug use and hepatitis B virus infection in the Women's Interagency HIV Study. Clin Infect Dis. 2004 Nov 01; 39(9):1363-70. Tien PC, Kovacs A, Bacchetti P, French AL, Augenbraun M, Cole SR, Hessol N, Justman J, Women's Interagency HIV Study . PMID: 15494914.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    213. Variation in care for nonmelanoma skin cancer in a private practice and a veterans affairs clinic. Med Care. 2004 Oct; 42(10):1019-26. Chren MM, Sahay AP, Sands LP, Maddock L, Lindquist K, Bertenthal D, Bacchetti P. PMID: 15377935.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    214. HIV-producing T cells in cerebrospinal fluid. . 2004 Oct 01; 37(2):1237-44. Neuenburg JK, Sinclair E, Nilsson A, Kreis C, Bacchetti P, Price RW, Grant RM. PMID: 15385730.
      View in: PubMed   Mentions:
    215. Women's Initiative for Nonsmoking-VII: evaluation of health service utilization and costs among women smokers with cardiovascular disease. J Cardiopulm Rehabil. 2004 Jul-Aug; 24(4):218-28. Froelicher ES, Sohn M, Max W, Bacchetti P. PMID: 15286526.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCTClinical Trials
    216. High rates of sustained smoking cessation in women hospitalized with cardiovascular disease: the Women's Initiative for Nonsmoking (WINS). Circulation. 2004 Feb 10; 109(5):587-93. Sivarajan Froelicher ES, Miller NH, Christopherson DJ, Martin K, Parker KM, Amonetti M, Lin Z, Sohn M, Benowitz N, Taylor CB, Bacchetti P. PMID: 14769679.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansPHPublic HealthCTClinical Trials
    217. Prediction of survival after liver retransplantation for late graft failure based on preoperative prognostic scores. Hepatology. 2004 Jan; 39(1):230-8. Yao FY, Saab S, Bass NM, Hirose R, Ly D, Terrault N, Lazar AA, Bacchetti P, Ascher NL, Roberts JP. PMID: 14752842.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    218. Human immunodeficiency virus type 1 superinfection was not detected following 215 years of injection drug user exposure. J Virol. 2004 Jan; 78(1):94-103. Tsui R, Herring BL, Barbour JD, Grant RM, Bacchetti P, Kral A, Edlin BR, Delwart EL. PMID: 14671091.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    219. Age and variant Creutzfeldt-Jakob disease. Emerg Infect Dis. 2003 Dec; 9(12):1611-2. Bacchetti P. PMID: 14720404.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    220. Prenatal screening for Down syndrome in England and Wales and population-based birth outcomes. Am J Obstet Gynecol. 2003 Oct; 189(4):980-5. Smith-Bindman R, Chu P, Bacchetti P, Waters JJ, Mutton D, Alberman E. PMID: 14586339.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    221. Short-term effects of cannabinoids in patients with HIV-1 infection: a randomized, placebo-controlled clinical trial. Ann Intern Med. 2003 Aug 19; 139(4):258-66. Abrams DI, Hilton JF, Leiser RJ, Shade SB, Elbeik TA, Aweeka FT, Benowitz NL, Bredt BM, Kosel B, Aberg JA, Deeks SG, Mitchell TF, Mulligan K, Bacchetti P, McCune JM, Schambelan M. PMID: 12965981.
      View in: PubMed   Mentions: 67     Fields:    Translation:HumansCellsCTClinical Trials
    222. Trends in human immunodeficiency virus seroincidence among street-recruited injection drug users in San Francisco, 1987-1998. Am J Epidemiol. 2003 May 15; 157(10):915-22. Kral AH, Lorvick J, Gee L, Bacchetti P, Rawal B, Busch M, Edlin BR. PMID: 12746244.
      View in: PubMed   Mentions: 37     Fields:    Translation:Humans
    223. Impact of renal insufficiency on short-term morbidity and mortality after lower extremity revascularization: data from the Department of Veterans Affairs' National Surgical Quality Improvement Program. J Am Soc Nephrol. 2003 May; 14(5):1287-95. O'Hare AM, Feinglass J, Sidawy AN, Bacchetti P, Rodriguez RA, Daley J, Khuri S, Henderson WG, Johansen KL. PMID: 12707397.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    224. Serum albumin is a powerful predictor of survival among HIV-1-infected women. . 2003 May 01; 33(1):66-73. Feldman JG, Gange SJ, Bacchetti P, Cohen M, Young M, Squires KE, Williams C, Goldwasser P, Anastos K. PMID: 12792357.
      View in: PubMed   Mentions:
    225. Sirolimus prolongs recovery from delayed graft function after cadaveric renal transplantation. Am J Transplant. 2003 Apr; 3(4):416-23. McTaggart RA, Gottlieb D, Brooks J, Bacchetti P, Roberts JP, Tomlanovich S, Feng S. PMID: 12694063.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    226. Adverse birth outcomes in relation to prenatal sonographic measurements of fetal size. J Ultrasound Med. 2003 Apr; 22(4):347-56; quiz 357-8. Smith-Bindman R, Chu PW, Ecker J, Feldstein VA, Filly RA, Bacchetti P. PMID: 12693618.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    227. Prognostic significance of postoperative in-hospital complications in elderly patients. I. Long-term survival. Anesth Analg. 2003 Feb; 96(2):583-9, table of contents. Manku K, Bacchetti P, Leung JM. PMID: 12538216.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    228. Decreased survival among sedentary patients undergoing dialysis: results from the dialysis morbidity and mortality study wave 2. Am J Kidney Dis. 2003 Feb; 41(2):447-54. O'Hare AM, Tawney K, Bacchetti P, Johansen KL. PMID: 12552509.
      View in: PubMed   Mentions: 74     Fields:    Translation:Humans
    229. Factors associated with future amputation among patients undergoing hemodialysis: results from the Dialysis Morbidity and Mortality Study Waves 3 and 4. Am J Kidney Dis. 2003 Jan; 41(1):162-70. O'Hare AM, Bacchetti P, Segal M, Hsu CY, Johansen KL, Dialysis Morbidity and Mortality Study Waves . PMID: 12500233.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    230. Sample size calculations in clinical research. Anesthesiology. 2002 Oct; 97(4):1028-9; author reply 1029-32. Bacchetti P, Leung JM. PMID: 12357184.
      View in: PubMed   Mentions: 6     Fields:    
    231. HIV-related neuropathology, 1985 to 1999: rising prevalence of HIV encephalopathy in the era of highly active antiretroviral therapy. . 2002 Oct 01; 31(2):171-7. Neuenburg JK, Brodt HR, Herndier BG, Bickel M, Bacchetti P, Price RW, Grant RM, Schlote W. PMID: 12394795.
      View in: PubMed   Mentions:
    232. Liver transplantation for hepatocellular carcinoma: comparison of the proposed UCSF criteria with the Milan criteria and the Pittsburgh modified TNM criteria. Liver Transpl. 2002 Sep; 8(9):765-74. Yao FY, Ferrell L, Bass NM, Bacchetti P, Ascher NL, Roberts JP. PMID: 12200775.
      View in: PubMed   Mentions: 97     Fields:    Translation:Humans
    233. Does patient sex affect human immunodeficiency virus levels? Clin Infect Dis. 2002 Aug 01; 35(3):313-22. Gandhi M, Bacchetti P, Miotti P, Quinn TC, Veronese F, Greenblatt RM. PMID: 12115098.
      View in: PubMed   Mentions: 68     Fields:    Translation:HumansCells
    234. Association of journal quality indicators with methodological quality of clinical research articles. JAMA. 2002 Jun 05; 287(21):2805-8. Lee KP, Schotland M, Bacchetti P, Bero LA. PMID: 12038918.
      View in: PubMed   Mentions: 62     Fields:    
    235. Generalized additive models with interval-censored data and time-varying covariates: application to human immunodeficiency virus infection in hemophiliacs. Biometrics. 2002 Jun; 58(2):443-7. Bacchetti P, Quale C. PMID: 12071419.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    236. Peer review of statistics in medical research: the other problem. BMJ. 2002 May 25; 324(7348):1271-3. Bacchetti P. PMID: 12028986.
      View in: PubMed   Mentions: 27     Fields:    Translation:Humans
    237. US evaluation of fetal growth: prediction of neonatal outcomes. Radiology. 2002 Apr; 223(1):153-61. Smith-Bindman R, Chu PW, Ecker JL, Feldstein VA, Filly RA, Bacchetti P. PMID: 11930060.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    238. Effect of managed care on preventable hospitalization rates in California. Med Care. 2002 Apr; 40(4):315-24. Backus L, Moron M, Bacchetti P, Baker LC, Bindman AB. PMID: 12021687.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    239. Peripheral vascular disease risk factors among patients undergoing hemodialysis. J Am Soc Nephrol. 2002 Feb; 13(2):497-503. O'Hare AM, Hsu CY, Bacchetti P, Johansen KL. PMID: 11805180.
      View in: PubMed   Mentions: 37     Fields:    Translation:Humans
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