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Vasilis Ntranos, PhD

Title(s)Assistant Professor, Diabetes Center
SchoolSchool of Medicine
Address513 Parnassus Ave, HSW
San Francisco CA 94143
Phone--
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Determining sequencing depth in a single-cell RNA-seq experiment. Nat Commun. 2020 02 07; 11(1):774. Zhang MJ, Ntranos V, Tse D. PMID: 32034137.
      View in: PubMed   Mentions: 1     Fields:    
    2. The barcode, UMI, set format and BUStools. Bioinformatics. 2019 11 01; 35(21):4472-4473. Melsted P, Ntranos V, Pachter L. PMID: 31073610.
      View in: PubMed   Mentions: 3     Fields:    
    3. Fumarates target the metabolic-epigenetic interplay of brain-homing T cells in multiple sclerosis. Brain. 2019 03 01; 142(3):647-661. Ntranos A, Ntranos V, Bonnefil V, Liu J, Kim-Schulze S, He Y, Zhu Y, Brandstadter R, Watson CT, Sharp AJ, Katz Sand I, Casaccia P. PMID: 30698680.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    4. Targeted Elimination of Senescent Beta Cells Prevents Type 1 Diabetes. Cell Metab. 2019 05 07; 29(5):1045-1060.e10. Thompson PJ, Shah A, Ntranos V, Van Gool F, Atkinson M, Bhushan A. PMID: 30799288.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansAnimalsCells
    5. Deterministic column subset selection for single-cell RNA-Seq. PLoS One. 2019; 14(1):e0210571. McCurdy SR, Ntranos V, Pachter L. PMID: 30682053.
      View in: PubMed   Mentions:    Fields:    
    6. A discriminative learning approach to differential expression analysis for single-cell RNA-seq. Nat Methods. 2019 02; 16(2):163-166. Ntranos V, Yi L, Melsted P, Pachter L. PMID: 30664774.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    7. Fast and accurate single-cell RNA-seq analysis by clustering of transcript-compatibility counts. Genome Biol. 2016 05 26; 17(1):112. Ntranos V, Kamath GM, Zhang JM, Pachter L, Tse DN. PMID: 27230763.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimalsCells
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