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Jason Crane, PhD

TitleDir,Informatics & Software
SchoolUCSF School of Medicine
DepartmentRadiology
Address1700 4th Street
San Francisco CA 94158
Phone415-514-4426
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    Collapse Biography 
    Collapse Education and Training
    University of IllinoisPostdocChemistry
    University of California, BerkeleyPhDChemistry
    Brandeis University B.A.Chemistry

    Collapse Overview 

    Collapse ORNG Applications 
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    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Bian W, Li Y, Crane J, Nelson SJ. Fully automated atlas-based method for prescribing 3D PRESS MR spectroscopic imaging: Toward robust and reproducible metabolite measurements in human brain. Magn Reson Med. 2017 May 03. PMID: 28470861.
      View in: PubMed
    2. Jalbert LE, Elkhaled A, Phillips JJ, Neill E, Williams A, Crane J, Olson MP, Molinaro AM, Berger MS, Kurhanewicz J, Ronen SM, Chang SM, Nelson SJ. Metabolic Profiling of IDH Mutation and Malignant Progression in Infiltrating Glioma. Sci Rep. 2017 Mar 22; 7:44792. PMID: 28327577.
      View in: PubMed
    3. Nelson SJ, Kadambi AK, Park I, Li Y, Crane J, Olson M, Molinaro A, Roy R, Butowski N, Cha S, Chang S, et al. Association of early changes in 1H MRSI parameters with survival for patients with newly diagnosed glioblastoma receiving a multimodality treatment regimen. Neuro Oncol. 2017 03 01; 19(3):430-439. PMID: 27576874.
      View in: PubMed
    4. Nelson SJ, Li Y, Lupo JM, Olson M, Crane J, Molinaro A, Roy R, Clarke J, Butowski N, Prados M, Cha S, Chang SM, et al. Serial analysis of 3D H-1 MRSI for patients with newly diagnosed GBM treated with combination therapy that includes bevacizumab. J Neurooncol. 2016 Oct; 130(1):171-179. PMID: 27535746.
      View in: PubMed
    5. von Morze C, Chang GY, Larson PE, Shang H, Allu PK, Bok RA, Crane J, Olson MP, Tan CT, Marco-Rius I, Nelson SJ, Kurhanewicz J, Pearce D, Vigneron DB. Detection of localized changes in the metabolism of hyperpolarized gluconeogenic precursors 13 C-lactate and 13 C-pyruvate in kidney and liver. Magn Reson Med. 2017 Apr; 77(4):1429-1437. PMID: 27098724.
      View in: PubMed
    6. Keshavan A, Paul F, Beyer MK, Zhu AH, Papinutto N, Shinohara RT, Stern W, Amann M, Bakshi R, Bischof A, Carriero A, Comabella M, Crane J, D'Alfonso S, Demaerel P, Dubois B, Filippi M, Fleischer V, Fontaine B, Gaetano L, Goris A, Graetz C, Gröger A, Groppa S, Hafler DA, Harbo HF, Hemmer B, Jordan K, Kappos L, Kirkish G, Llufriu S, Magon S, Martinelli-Boneschi F, McCauley J, Montalban X, Muhlau M, Pelletier D, Pattany PM, Pericak-Vance M, Rebeix I, Rocca M, Rovira A, Schlaeger R, Saiz A, Sprenger T, Stecco A, Uitdehaag BM, Villoslada P, Wattjes MP, Weiner H, Wuerfel J, Zimmer C, Zipp F, Hauser S, Oksenberg JR, Henry RG. Power estimation for non-standardized multisite studies. Neuroimage. 2016 Jul 01; 134:281-294. PMID: 27039700.
      View in: PubMed
    7. Gourraud PA, Henry RG, Cree BA, Crane J, Lizee A, Olson MP, Santaniello AV, Datta E, Zhu AH, Bevan CJ, Gelfand JM, Graves JS, Goodin DS, Green AJ, von Büdingen HC, Waubant E, Zamvil SS, Crabtree-Hartman E, Nelson S, Baranzini SE, Hauser SL. Precision medicine in chronic disease management: The multiple sclerosis BioScreen. Ann Neurol. 2014 Nov; 76(5):633-42. PMID: 25263997; PMCID: PMC4214886.
    8. Crane J, Olson MP, Nelson SJ. SIVIC: Open-Source, Standards-Based Software for DICOM MR Spectroscopy Workflows. Int J Biomed Imaging. 2013; 2013:169526. PMID: 23970895; PMCID: PMC3732592.
    9. Nelson SJ, Ozhinsky E, Li Y, Park Iw, Crane J. Strategies for rapid in vivo 1H and hyperpolarized 13C MR spectroscopic imaging. J Magn Reson. 2013 Apr; 229:187-97. PMID: 23453759; PMCID: PMC3808990.
    10. Goldenstein J, Schooler J, Crane J, Ozhinsky E, Pialat JB, Carballido-Gamio J, Majumdar S. Prospective image registration for automated scan prescription of follow-up knee images in quantitative studies. Magn Reson Imaging. 2011 Jun; 29(5):693-700. PMID: 21546186; PMCID: PMC3100398.
    11. Li Y, Lupo JM, Polley MY, Crane J, Bian W, Cha S, Chang S, Nelson SJ. Serial analysis of imaging parameters in patients with newly diagnosed glioblastoma multiforme. Neuro Oncol. 2011 May; 13(5):546-57. PMID: 21297128; PMCID: PMC3093330.
    12. Ozturk-Isik E, Chen AP, Crane J, Bian W, Xu D, Han ET, Chang SM, Vigneron DB, Nelson SJ. 3D sensitivity encoded ellipsoidal MR spectroscopic imaging of gliomas at 3T. Magn Reson Imaging. 2009 Nov; 27(9):1249-57. PMID: 19766422; PMCID: PMC3022436.
    13. Noworolski SM, Crane J, Vigneron DB, Kurhanewicz J. A clinical comparison of rigid and inflatable endorectal-coil probes for MRI and 3D MR spectroscopic imaging (MRSI) of the prostate. J Magn Reson Imaging. 2008 May; 27(5):1077-82. PMID: 18407539; PMCID: PMC2832222.
    14. Hu S, Lustig M, Chen AP, Crane J, Kerr A, Kelley DA, Hurd R, Kurhanewicz J, Nelson SJ, Pauly JM, Vigneron DB. Compressed sensing for resolution enhancement of hyperpolarized 13C flyback 3D-MRSI. J Magn Reson. 2008 Jun; 192(2):258-64. PMID: 18367420; PMCID: PMC2475338.
    15. Li Y, Chen AP, Crane J, Chang SM, Vigneron DB, Nelson SJ. Three-dimensional J-resolved H-1 magnetic resonance spectroscopic imaging of volunteers and patients with brain tumors at 3T. Magn Reson Med. 2007 Nov; 58(5):886-92. PMID: 17969114.
      View in: PubMed
    16. Crane J, Crawford FW, Nelson SJ. Grid enabled magnetic resonance scanners for near real-time medical image processing. Journal of Parallel and Distributed Computing. 2006; 66(12):1524-1533.
    17. Li Y, Osorio JA, Ozturk-Isik E, Chen AP, Xu D, Crane J, Cha S, Chang S, Berger MS, Vigneron DB, Nelson SJ. Considerations in applying 3D PRESS H-1 brain MRSI with an eight-channel phased-array coil at 3 T. Magn Reson Imaging. 2006 Dec; 24(10):1295-302. PMID: 17145400.
      View in: PubMed
    18. Blumenkrantz G, Li X, Han ET, Newitt DC, Crane J, Link TM, Majumdar S. A feasibility study of in vivo T1rho imaging of the intervertebral disc. Magn Reson Imaging. 2006 Oct; 24(8):1001-7. PMID: 16997069.
      View in: PubMed
    19. Ozturk-Isik E, Crane J, Cha S, Chang SM, Berger MS, Nelson SJ. Unaliasing lipid contamination for MR spectroscopic imaging of gliomas at 3T using sensitivity encoding (SENSE). Magn Reson Med. 2006 May; 55(5):1164-9. PMID: 16596629.
      View in: PubMed
    20. Oh J, Cha S, Aiken AH, Han ET, Crane J, Stainsby JA, Wright GA, Dillon WP, Nelson SJ. Quantitative apparent diffusion coefficients and T2 relaxation times in characterizing contrast enhancing brain tumors and regions of peritumoral edema. J Magn Reson Imaging. 2005 Jun; 21(6):701-8. PMID: 15906339.
      View in: PubMed
    21. Jäger M, Nguyen H, Crane J, Kelly JW, Gruebele M. The folding mechanism of a beta-sheet: the WW domain. J Mol Biol. 2001 Aug 10; 311(2):373-93. PMID: 11478867.
      View in: PubMed
    22. Crane J, Koepf EK, Kelly JW, Gruebele M. Mapping the transition state of the WW domain beta-sheet. J Mol Biol. 2000 Apr 28; 298(2):283-92. PMID: 10764597.
      View in: PubMed
    23. Crane J, Nam H, Clauberg H, Beal HP, Kalinovski IJ, Shu RG, Moore CB. Stimulated emission pumping spectra and intramolecular vibrational dynamics of DFCO(S0) from 9000 to 20,000 cm(-1). The journal of physical chemistry. A. 1998; 47(102):9433-9444.
    24. Crane J, Kawai A , Nam H , Clauberg H , Beal HP , Guinn P , Moore CB. Vibrational Assignment and Anharmonic Resonance Analysis of the Dispersed Fluorescence and Stimulated Emission Pumping Spectra of DFCO (S 0 ) up to 9000 cm-1. Journal of Molecular Spectroscopy. 1997; 2(183):273-284.
    25. Crane J, Hakhyun Nam, Harry P. Beal, Horst Clauberg, Young S. Choi, C.Bradley Moore, John F. Stanton. Vibrational Assignment of theS1Fluorescence Excitation Spectrum of Formyl Fluoride. Journal of Molecular Spectroscopy. 1996; 1(181):56-66.
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