Adam Abate, PhD

Title(s)Professor, Bioengineering
SchoolSchool of Pharmacy
Address1700 4th Street, #303C
San Francisco CA 94158
Phone415-476-9819
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    Collapse Biography 
    Collapse Awards and Honors
    Harvard University2000  - 2002Stanley A. Marks Scholar
    NSF2013  - 2018CAREER Award
    NSF, NIMS2013  - 2014US-Japan Young Scientist Exchange Program
    NIH2014  - 2019New Innovator Award

    Collapse Overview 
    Collapse Overview
    Dr. Adam Abate is a physicist who brings a unique research program to the campus. His research employs microfluidics for high-throughput biological applications. He has developed microfluidic methods to create emulsions that consist of droplets of very precise and consistent sizes and to manipulate the processing and contents of individual droplets in different ways. The droplets are used to create micro-compartments, which can be loaded with single cells and other active materials, such as drugs, nutrients, and assay reagents. By chaining together different microdevice components, the droplets can be used as tiny "test tubes" for performing chemical and biological reactions. This allows multiple, independent reactions to take place at the rate of thousands per second, while using minuscule amounts of total reagent. Adam is using this approach for directed evolution, genetic sequencing, and cell sorting.

    Collapse Research 
    Collapse Research Activities and Funding
    Ultrahigh Throughput Microscale Mass Spectrometry for Pharmaceutical Prenylation Enzyme Engineering
    NIH R41GM143989Sep 25, 2021 - Mar 24, 2022
    Role: Co-Principal Investigator
    Multi-omic dissection of the transcriptional, epigenetic, and proteomic signatures of cells infected with latent HIV
    NIH R01AI149699Jul 1, 2020 - Jun 30, 2025
    Role: Co-Principal Investigator
    A platform for engineering peptide ligase for building next generation peptide therapeutics.
    NIH R41GM136037Feb 7, 2020 - Aug 6, 2021
    Role: Principal Investigator
    SINGLE-CELL TRANSCRIPTOMIC ANALYSIS OF HIV-INFECTED CD4 T CELLS IN BLOOD AND LYMPHOID TISSUE USING PCR-ACTIVATED CELL SORTING
    NIH U01AI129206Aug 17, 2017 - Jul 31, 2021
    Role: Principal Investigator
    Accurate and unbiased single cell sequencing with digital droplet MDA
    NIH R01HG008978Sep 9, 2016 - Jun 30, 2019
    Role: Principal Investigator
    Gigapixel digital PCR in Giant Unilamellar Vesicles
    NIH R01EB019453Sep 30, 2014 - Mar 31, 2023
    Role: Principal Investigator
    Microfluidic immunoprofiling for biomarker discovery in rheumatoid arthritis
    NIH DP2AR068129Sep 30, 2014 - Jun 30, 2019
    Role: Principal Investigator
    Accurate, long-read sequencing with droplet-microfluidic barcoding
    NIH R21HG007233Aug 1, 2013 - Jun 30, 2016
    Role: Principal Investigator
    Advancing Whole-Organism Screening for Chemical Modifiers of the Brain
    NIH R21NS082938Feb 1, 2013 - Jan 31, 2016
    Role: Co-Principal Investigator

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    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Microbiome single cell atlases generated with a commercial instrument. bioRxiv. 2024 Mar 16. Li X, Xu L, Demaree B, Noecker C, Bisanz JE, Weisgerber DW, Modavi C, Turnbaugh PJ, Abate AR. PMID: 37609281; PMCID: PMC10441329.
      View in: PubMed   Mentions:
    2. Functional interactions between neurofibromatosis tumor suppressors underlie Schwann cell tumor de-differentiation and treatment resistance. Nat Commun. 2024 Jan 12; 15(1):477. Vasudevan HN, Payne E, Delley CL, John Liu S, Mirchia K, Sale MJ, Lastella S, Nunez MS, Lucas CG, Eaton CD, Casey-Clyde T, Magill ST, Chen WC, Braunstein SE, Perry A, Jacques L, Reddy AT, Pekmezci M, Abate AR, McCormick F, Raleigh DR. PMID: 38216572; PMCID: PMC10786885.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    3. DDDR-18. SINGLE-CELL FUNCTIONAL GENOMIC ANALYSIS OF PHARMACOLOGIC RESPONSES IN NF1 MUTANT GLIOBLASTOMA REVEALS DISTINCT MECHANISMS OF ACTION FOR MEK AND SHP2 INHIBITION. Neuro-Oncology. 2023 Nov 10; 25(Supplement_5):v109-v109. Pan PS, Liu LJ, Mirchia MK, Payne PE, Pak PJ, Seo SK, Ozawa OT, Raleigh RD, Berger BM, Abate AA, Vasudevan VH. .
      View in: Publisher Site   Mentions:
    4. Printhead on a chip: empowering droplet-based bioprinting with microfluidics. Trends Biotechnol. 2024 03; 42(3):353-368. Zhang P, Liu C, Modavi C, Abate A, Chen H. PMID: 37777352.
      View in: PubMed   Mentions: 1     Fields:    
    5. Microbiome single cell atlases generated with a commercial instrument. Res Sq. 2023 Sep 14. Abate A, Li X, Xu L, Demaree B, Noecker C, Bisanz J, Weisgerber D, Modavi C, Turnbaugh P. PMID: 37790580; PMCID: PMC10543498.
      View in: PubMed   Mentions:
    6. Molecular Features of Resected Melanoma Brain Metastases, Clinical Outcomes, and Responses to Immunotherapy. JAMA Netw Open. 2023 08 01; 6(8):e2329186. Vasudevan HN, Delley C, Chen WC, Mirchia K, Pan S, Shukla P, Aabedi AA, Nguyen MP, Morshed RA, Young JS, Boreta L, Fogh SE, Nakamura JL, Theodosopoulos PV, Phillips J, Hervey-Jumper SL, Daras M, Pike L, Aghi MK, Tsai K, Raleigh DR, Braunstein SE, Abate AR. PMID: 37589977; PMCID: PMC10436135.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    7. Viral load quantitation at the point-of-care with shaken digital droplet RT-LAMP. Lab Chip. 2023 07 25; 23(15):3479-3486. Weisgerber DW, Langer K, Servellita V, Xu P, Chiu CY, Abate AR. PMID: 37431299; PMCID: PMC10368152.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    8. Multiomic Single Cell Sequencing Identifies Stemlike Nature of Mixed Phenotype Acute Leukemia and Provides Novel Risk Stratification. bioRxiv. 2023 May 18. Peretz CAC, Kennedy VE, Walia A, Delley CL, Koh A, Tran E, Clark IC, Hayford CE, D'Amato C, Xue Y, Fontanez KM, Roy R, Logan AC, Perl AE, Abate A, Olshen A, Smith CC. PMID: 37292835; PMCID: PMC10245585.
      View in: PubMed   Mentions:
    9. Flow cytometric printing of double emulsions into open droplet arrays. Lab Chip. 2023 May 16; 23(10):2371-2377. Zhang P, Xu L, Chen H, Abate AR. PMID: 37070963.
      View in: PubMed   Mentions:    Fields:    
    10. Droplet-based microfluidics. Nature Reviews Methods Primers. 2023 Apr 20; 3(1):32. Moragues MT, Arguijo AD, Beneyton BT, Modavi MC, Simutis SK, Abate AA, Baret BJ, deMello dA, Densmore DD, Griffiths GA. .
      View in: Publisher Site   Mentions:
    11. Droplet-based forward genetic screening of astrocyte-microglia cross-talk. Science. 2023 03 10; 379(6636):1023-1030. Wheeler MA, Clark IC, Lee HG, Li Z, Linnerbauer M, Rone JM, Blain M, Akl CF, Piester G, Giovannoni F, Charabati M, Lee JH, Kye YC, Choi J, Sanmarco LM, Srun L, Chung EN, Flausino LE, Andersen BM, Rothhammer V, Yano H, Illouz T, Zandee SEJ, Daniel C, Artis D, Prinz M, Abate AR, Kuchroo VK, Antel JP, Prat A, Quintana FJ. PMID: 36893254; PMCID: PMC10066924.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    12. Microfluidics-free single-cell genomics with templated emulsification. Nat Biotechnol. 2023 Nov; 41(11):1557-1566. Clark IC, Fontanez KM, Meltzer RH, Xue Y, Hayford C, May-Zhang A, D'Amato C, Osman A, Zhang JQ, Hettige P, Ishibashi JSA, Delley CL, Weisgerber DW, Replogle JM, Jost M, Phong KT, Kennedy VE, Peretz CAC, Kim EA, Song S, Karlon W, Weissman JS, Smith CC, Gartner ZJ, Abate AR. PMID: 36879006; PMCID: PMC10635830.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    13. Identification of astrocyte regulators by nucleic acid cytometry. Nature. 2023 02; 614(7947):326-333. Clark IC, Wheeler MA, Lee HG, Li Z, Sanmarco LM, Thaploo S, Polonio CM, Shin SW, Scalisi G, Henry AR, Rone JM, Giovannoni F, Charabati M, Akl CF, Aleman DM, Zandee SEJ, Prat A, Douek DC, Boritz EA, Quintana FJ, Abate AR. PMID: 36599367; PMCID: PMC9980163.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
    14. HIV silencing and cell survival signatures in infected T cell reservoirs. Nature. 2023 02; 614(7947):318-325. Clark IC, Mudvari P, Thaploo S, Smith S, Abu-Laban M, Hamouda M, Theberge M, Shah S, Ko SH, Pérez L, Bunis DG, Lee JS, Kilam D, Zakaria S, Choi S, Darko S, Henry AR, Wheeler MA, Hoh R, Butrus S, Deeks SG, Quintana FJ, Douek DC, Abate AR, Boritz EA. PMID: 36599978; PMCID: PMC9908556.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    15. OP 1.2 – 00157 HIV Silencing and Cell Survival Signatures of HIV-Infected CD4 T Cell Transcriptomes under Antiretroviral Therapy (ART). Journal of Virus Eradication. 2022 Dec 1; 8:100097. Clark CI, Mudvari MP, Thaploo TS, Smith SS, Abu-Laban AM, Deeks DS, Quintana QF, Douek DD, Abate AA, Boritz BE. .
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    16. Rapid parallel generation of a fluorescently barcoded drop library from a microtiter plate using the plate-interfacing parallel encapsulation (PIPE) chip. Lab Chip. 2022 11 22; 22(23):4735-4745. Zath GK, Sperling RA, Hoffman CW, Bikos DA, Abbasi R, Abate AR, Weitz DA, Chang CB. PMID: 36367139; PMCID: PMC10016142.
      View in: PubMed   Mentions:    Fields:    
    17. Multiomic Single-Cell Sequencing of Mixed Phenotypic Acute Leukemia (MPAL) Reveals Complex Immunophenotypic, Transcriptional, and Genetic Heterogeneity. Blood. 2022 Nov 15; 140(Supplement 1):9146-9147. Peretz PC, Kennedy KV, Walia WA, Delley DC, Koh KA, Tran TE, Clark CI, Hayford HC, Xue XY, D'Amato DC, Fontanez FK, Roy RR, Olshen OA, Logan LA, Perl PA, Abate AA, Smith SC. .
      View in: Publisher Site   Mentions:
    18. BIOM-02. MUTATIONAL ANALYSIS AND SINGLE CELL SEQUENCING OF MELANOMA BRAIN METASTASES REVEALS BRAF STATUS CORRELATES WITH CLINICAL OUTCOME AND DIFFERENTIAL IMMUNE POPULATIONS. Neuro-Oncology. 2022 Nov 14; 24(Supplement_7):vii3-vii4. Vasudevan VH, Delley DC, Aabedi AA, Shukla SP, Nguyen NM, Morshed MR, Young YJ, Demaree DB, Diwanji DD, Hervey-Jumper HS, Boreta BL, Fogh FS, Nakamura NJ, Theodospoulos TP, Phillips PJ, Daras DM, Tsai TK, Sneed SP, Aghi AM, Raleigh RD, Braunstein BS, Abate AA. .
      View in: Publisher Site   Mentions:
    19. DDDR-06. NEUROFIBROMATOSIS TUMOR SUPPRESSORS COOPERATIVELY DRIVE TUMOR DE-DIFFERENTIATION AND MEK INHIBITOR RESISTANCE IN PERIPHERAL NERVOUS SYSTEM TUMORS. Neuro-Oncology. 2022 Nov 14; 24(Supplement_7):vii99-vii99. Vasudevan VH, Payne PE, Delley DC, Sale SM, Liu LS, Lastella LS, Lucas LC, Eaton EC, Casey-Clyde CT, Magill MS, Chen CW, Reddy RA, Braunstein BS, Perry PA, Jacques JL, Pekmezci PM, Abate AA, McCormick MF, Raleigh RD. .
      View in: Publisher Site   Mentions:
    20. Mutational Analysis and Single Cell Sequencing of Melanoma Brain Metastases. International Journal of Radiation Oncology • Biology • Physics. 2022 Nov 1; 114(3):e63-e64. Vasudevan VH, Delley DC, Aabedi AA, Nguyen NM, Morshed MR, Young YJ, Demaree DB, Diwanji DD, Hervey-Jumper HS, Boreta BL, Fogh FS, Nakamura NJ, Theodosopoulos TP, Phillips PJ, Daras DM, Tsai TK, Sneed SP, Aghi AM, Raleigh RD, Braunstein BS, Abate AA. .
      View in: Publisher Site   Mentions:
    21. Controlled fabrication of functional liver spheroids with microfluidic flow cytometric printing. Biofabrication. 2022 08 23; 14(4). Zhang P, Li X, Chen JY, Abate AR. PMID: 35917810.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    22. G1/S restriction point coordinates phasic gene expression and cell differentiation. Nat Commun. 2022 06 27; 13(1):3696. DeVeale B, Liu L, Boileau R, Swindlehurst-Chan J, Marsh B, Freimer JW, Abate A, Blelloch R. PMID: 35760790; PMCID: PMC9237072.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    23. Scalable Microbial Strain Inference in Metagenomic Data Using StrainFacts. Front Bioinform. 2022; 2:867386. Smith BJ, Li X, Shi ZJ, Abate A, Pollard KS. PMID: 36304283; PMCID: PMC9580935.
      View in: PubMed   Mentions: 1  
    24. Polyhedral Particles with Controlled Concavity by Indentation Templating. Anal Chem. 2022 05 31; 94(21):7475-7482. Weisgerber DW, Hatori M, Li X, Abate AR. PMID: 35578791; PMCID: PMC9161221.
      View in: PubMed   Mentions:    Fields:    
    25. Droplet-microfluidics-assisted sequencing of HIV proviruses and their integration sites in cells from people on antiretroviral therapy. Nat Biomed Eng. 2022 08; 6(8):1004-1012. Sun C, Liu L, Pérez L, Li X, Liu Y, Xu P, Boritz EA, Mullins JI, Abate AR. PMID: 35347274; PMCID: PMC9398922.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    26. Microbowls with Controlled Concavity for Accurate Microscale Mass Spectrometry (Adv. Mater. 12/2022). Advanced Materials. 2022 Mar 24; 34(12):2270095. Xu XL, Li LX, Li LW, Chang CK, Yang YH, Tao TN, Zhang ZP, Payne PE, Modavi MC, Humphries HJ, Lu LC, Abate AA. .
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    27. Microbowls with Controlled Concavity for Accurate Microscale Mass Spectrometry. Adv Mater. 2022 Mar; 34(12):e2108194. Xu L, Li X, Li W, Chang KC, Yang H, Tao N, Zhang P, Payne EM, Modavi C, Humphries J, Lu CW, Abate AR. PMID: 35045587; PMCID: PMC9028217.
      View in: PubMed   Mentions: 2     Fields:    
    28. Dual-layered hydrogels allow complete genome recovery with nucleic acid cytometry. Biotechnol J. 2022 Apr; 17(4):e2100483. Hatori MN, Modavi C, Xu P, Weisgerber D, Abate AR. PMID: 35088927; PMCID: PMC9208836.
      View in: PubMed   Mentions:    Fields:    
    29. Robotic automation of droplet microfluidics. Biomicrofluidics. 2022 Jan; 16(1):014102. Tran TM, Kim SC, Modavi C, Abate AR. PMID: 35145570; PMCID: PMC8816516.
      View in: PubMed   Mentions: 1  
    30. Characterizing cell interactions at scale with made-to-order droplet ensembles (MODEs). Proc Natl Acad Sci U S A. 2022 02 01; 119(5). Madrigal JL, Schoepp NG, Xu L, Powell CS, Delley CL, Siltanen CA, Danao J, Srinivasan M, Cole RH, Abate AR. PMID: 35074872; PMCID: PMC8812558.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimals
    31. Single-Cell Protein Profiling by Microdroplet Barcoding and Next-Generation Sequencing. Methods Mol Biol. 2022; 2386:101-111. Kim SC, Haliburton JR, Gartner ZJ, Abate AR. PMID: 34766267; PMCID: PMC9122841.
      View in: PubMed   Mentions:    Fields:    
    32. The chromatin repressors EZH2 and Suv4-20h coregulate cell fate specification during hippocampal development. FEBS Lett. 2022 02; 596(3):294-308. Chang KC, Rhodes CT, Zhang JQ, Moseley MC, Cardona SM, Huang SA, Rawls A, Lemmon VP, Berger MS, Abate AR, Lin CA. PMID: 34890048.
      View in: PubMed   Mentions: 1     Fields:    
    33. Mapping enzyme catalysis with metabolic biosensing. Nat Commun. 2021 11 23; 12(1):6803. Xu L, Chang KC, Payne EM, Modavi C, Liu L, Palmer CM, Tao N, Alper HS, Kennedy RT, Cornett DS, Abate AR. PMID: 34815408; PMCID: PMC8611028.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    34. CSIG-01. EPIGENETIC REPROGRAMMING DRIVES MALIGNANT PERIPHERAL NERVE SHEATH TUMOR (MPNST) DE-DIFFERENTIATION AND TREATMENT RESISTANCE. Neuro-Oncology. 2021 Nov 12; 23(Supplement_6):vi33-vi33. Vasudevan VH, Lastella LS, Sale SM, Casey-Clyde CT, Demaree DB, Delley DC, Lucas LC, Magill MS, Liu LJ, Chen CW, Braunstein BS, Reddy RA, Perry PA, Jacques JL, Pekmezci PM, Abate AA, McCormick MF, Raleigh RD. .
      View in: Publisher Site   Mentions:
    35. Change can be SCARI. Nat Chem Biol. 2021 11; 17(11):1119-1120. Modavi C, Abate A. PMID: 34504323.
      View in: PubMed   Mentions:    Fields:    
    36. Accurate Bulk Quantitation of Droplet Digital Polymerase Chain Reaction. Anal Chem. 2021 07 27; 93(29):9974-9979. Sun C, Liu L, Vasudevan HN, Chang KC, Abate AR. PMID: 34252272; PMCID: PMC8829825.
      View in: PubMed   Mentions: 4     Fields:    
    37. Modular barcode beads for microfluidic single cell genomics. Sci Rep. 2021 05 25; 11(1):10857. Delley CL, Abate AR. PMID: 34035349; PMCID: PMC8149635.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    38. Sequencing Ultrarare Targets with Compound Nucleic Acid Cytometry. Anal Chem. 2021 05 25; 93(20):7422-7429. Sun C, Chang KC, Abate AR. PMID: 33971091; PMCID: PMC9022902.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    39. Constrained chromatin accessibility in PU.1-mutated agammaglobulinemia patients. J Exp Med. 2021 07 05; 218(7). Le Coz C, Nguyen DN, Su C, Nolan BE, Albrecht AV, Xhani S, Sun D, Demaree B, Pillarisetti P, Khanna C, Wright F, Chen PA, Yoon S, Stiegler AL, Maurer K, Garifallou JP, Rymaszewski A, Kroft SH, Olson TS, Seif AE, Wertheim G, Grant SFA, Vo LT, Puck JM, Sullivan KE, Routes JM, Zakharova V, Shcherbina A, Mukhina A, Rudy NL, Hurst ACE, Atkinson TP, Boggon TJ, Hakonarson H, Abate AR, Hajjar J, Nicholas SK, Lupski JR, Verbsky J, Chinn IK, Gonzalez MV, Wells AD, Marson A, Poon GMK, Romberg N. PMID: 33951726; PMCID: PMC8105723.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    40. Barcoded viral tracing of single-cell interactions in central nervous system inflammation. Science. 2021 04 23; 372(6540). Clark IC, Gutiérrez-Vázquez C, Wheeler MA, Li Z, Rothhammer V, Linnerbauer M, Sanmarco LM, Guo L, Blain M, Zandee SEJ, Chao CC, Batterman KV, Schwabenland M, Lotfy P, Tejeda-Velarde A, Hewson P, Manganeli Polonio C, Shultis MW, Salem Y, Tjon EC, Fonseca-Castro PH, Borucki DM, Alves de Lima K, Plasencia A, Abate AR, Rosene DL, Hodgetts KJ, Prinz M, Antel JP, Prat A, Quintana FJ. PMID: 33888612; PMCID: PMC8157482.
      View in: PubMed   Mentions: 73     Fields:    Translation:HumansAnimalsCells
    41. Precision ejection of microfluidic droplets into air with a superhydrophobic outlet. Lab Chip. 2021 04 20; 21(8):1484-1491. Zhang P, Chang KC, Abate AR. PMID: 33656500; PMCID: PMC8189694.
      View in: PubMed   Mentions:    Fields:    
    42. Protein design-scapes generated by microfluidic DNA assembly elucidate domain coupling in the bacterial histidine kinase CpxA. Proc Natl Acad Sci U S A. 2021 03 23; 118(12). Clark IC, Mensa B, Ochs CJ, Schmidt NW, Mravic M, Quintana FJ, DeGrado WF, Abate AR. PMID: 33723045; PMCID: PMC8000134.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    43. Joint profiling of DNA and proteins in single cells to dissect genotype-phenotype associations in leukemia. Nat Commun. 2021 03 11; 12(1):1583. Demaree B, Delley CL, Vasudevan HN, Peretz CAC, Ruff D, Smith CC, Abate AR. PMID: 33707421; PMCID: PMC7952600.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    44. Particle Templated Emulsification enables Microfluidic-Free Droplet Assays. J Vis Exp. 2021 03 09; (169). Weisgerber DW, Hatori MN, Abate AR. PMID: 33779600.
      View in: PubMed   Mentions:    Fields:    
    45. Particle Templated Emulsification enables Microfluidic-Free Droplet Assays. Journal of Visualized Experiments. 2021 Mar 9; (169). Weisgerber WD, Hatori HM, Abate AA. .
      View in: Publisher Site   Mentions:
    46. Simple, Affordable, and Modular Patterning of Cells using DNA. Journal of Visualized Experiments. 2021 Feb 24; (168). Cabral CK, Patterson PD, Scheideler SO, Cole CR, Abate AA, Schaffer SD, Sohn SL, Gartner GZ. .
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    47. Simple, Affordable, and Modular Patterning of Cells using DNA. J Vis Exp. 2021 02 24; (168). Cabral KA, Patterson DM, Scheideler OJ, Cole R, Abate AR, Schaffer DV, Sohn LL, Gartner ZJ. PMID: 33720126; PMCID: PMC10870346.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    48. High diversity droplet microfluidic libraries generated with a commercial liquid spotter. Sci Rep. 2021 02 23; 11(1):4351. Zhang JQ, Siltanen CA, Dolatmoradi A, Sun C, Chang KC, Cole RH, Gartner ZJ, Abate AR. PMID: 33623093; PMCID: PMC7902812.
      View in: PubMed   Mentions: 1     Fields:    
    49. Accurate bulk quantitation of droplet digital PCR. bioRxiv. 2021 Jan 15. Sun C, Liu L, Vasudevan HN, Chang KC, Abate AR. PMID: 33469578; PMCID: PMC7814815.
      View in: PubMed   Mentions:
    50. Digital droplet PCR accurately quantifies SARS-CoV-2 viral load from crude lysate without nucleic acid purification. Sci Rep. 2021 01 12; 11(1):780. Vasudevan HN, Xu P, Servellita V, Miller S, Liu L, Gopez A, Chiu CY, Abate AR. PMID: 33436939; PMCID: PMC7804156.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    51. Networks of High Aspect Ratio Particles to Direct Colloidal Assembly Dynamics and Cellular Interactions. Adv Funct Mater. 2020 Nov 25; 30(48). Finbloom JA, Demaree B, Abate AR, Desai TA. PMID: 33250685; PMCID: PMC7687842.
      View in: PubMed   Mentions: 2  
    52. High-Definition Single-Cell Printing: Cell-by-Cell Fabrication of Biological Structures. Adv Mater. 2020 Dec; 32(52):e2005346. Zhang P, Abate AR. PMID: 33206435; PMCID: PMC7987217.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    53. Single-cell mutation analysis of clonal evolution in myeloid malignancies. Nature. 2020 11; 587(7834):477-482. Miles LA, Bowman RL, Merlinsky TR, Csete IS, Ooi AT, Durruthy-Durruthy R, Bowman M, Famulare C, Patel MA, Mendez P, Ainali C, Demaree B, Delley CL, Abate AR, Manivannan M, Sahu S, Goldberg AD, Bolton KL, Zehir A, Rampal R, Carroll MP, Meyer SE, Viny AD, Levine RL. PMID: 33116311; PMCID: PMC7677169.
      View in: PubMed   Mentions: 178     Fields:    Translation:HumansCells
    54. Targeted Single-Cell RNA and DNA Sequencing With Fluorescence-Activated Droplet Merger. Anal Chem. 2020 11 03; 92(21):14616-14623. Clark IC, Delley CL, Sun C, Thakur R, Stott SL, Thaploo S, Li Z, Quintana FJ, Abate AR. PMID: 33049138; PMCID: PMC8182774.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    55. Multiplatform genomic profiling and magnetic resonance imaging identify mechanisms underlying intratumor heterogeneity in meningioma. Nat Commun. 2020 09 23; 11(1):4803. Magill ST, Vasudevan HN, Seo K, Villanueva-Meyer JE, Choudhury A, John Liu S, Pekmezci M, Findakly S, Hilz S, Lastella S, Demaree B, Braunstein SE, Bush NAO, Aghi MK, Theodosopoulos PV, Sneed PK, Abate AR, Berger MS, McDermott MW, Lim DA, Ullian EM, Costello JF, Raleigh DR. PMID: 32968068; PMCID: PMC7511976.
      View in: PubMed   Mentions: 35     Fields:    Translation:HumansCells
    56. Digital droplet PCR accurately quantifies SARS-CoV-2 viral load from crude lysate without nucleic acid purification. medRxiv. 2020 Sep 03. Vasudevan H, Xu P, Servellita V, Miller S, Liu L, Gopez A, Chiu CY, Abate AR. PMID: 32908995; PMCID: PMC7480047.
      View in: PubMed   Mentions:
    57. Microfluidic particle zipper enables controlled loading of droplets with distinct particle types. Lab Chip. 2020 07 14; 20(14):2465-2472. Delley CL, Abate AR. PMID: 32531004; PMCID: PMC7978498.
      View in: PubMed   Mentions: 4     Fields:    
    58. High Throughput Yeast Strain Phenotyping with Droplet-Based RNA Sequencing. J Vis Exp. 2020 05 21; (159). Zhang JQ, Chang KC, Liu L, Gartner ZJ, Abate AR. PMID: 32510483.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    59. High Throughput Yeast Strain Phenotyping with Droplet-Based RNA Sequencing. Journal of Visualized Experiments. 2020 May 21; (159). Zhang ZJ, Chang CK, Liu LL, Gartner GZ, Abate AA. .
      View in: Publisher Site   Mentions:
    60. Microfluidic automated plasmid library enrichment for biosynthetic gene cluster discovery. Nucleic Acids Res. 2020 05 07; 48(8):e48. Xu P, Modavi C, Demaree B, Twigg F, Liang B, Sun C, Zhang W, Abate AR. PMID: 32095820; PMCID: PMC7192590.
      View in: PubMed   Mentions: 5     Fields:    Translation:CellsPHPublic Health
    61. Linked optical and gene expression profiling of single cells at high-throughput. Genome Biol. 2020 02 24; 21(1):49. Zhang JQ, Siltanen CA, Liu L, Chang KC, Gartner ZJ, Abate AR. PMID: 32093753; PMCID: PMC7041248.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
    62. Multiplatform Molecular Profiling Reveals Epigenomic Intratumor Heterogeneity in Ependymoma. Cell Rep. 2020 02 04; 30(5):1300-1309.e5. Liu SJ, Magill ST, Vasudevan HN, Hilz S, Villanueva-Meyer JE, Lastella S, Daggubati V, Spatz J, Choudhury A, Orr BA, Demaree B, Seo K, Ferris SP, Abate AR, Oberheim Bush NA, Bollen AW, McDermott MW, Costello JF, Raleigh DR. PMID: 32023450; PMCID: PMC7313374.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    63. Discovery of Stable and Selective Antibody Mimetics from Combinatorial Libraries of Polyvalent, Loop-Functionalized Peptoid Nanosheets. ACS Nano. 2020 01 28; 14(1):185-195. Kim JH, Kim SC, Kline MA, Grzincic EM, Tresca BW, Cardiel J, Karbaschi M, Dehigaspitiya DC, Chen Y, Udumula V, Jian T, Murray DJ, Yun L, Connolly MD, Liu J, Ren G, Chen CL, Kirshenbaum K, Abate AR, Zuckermann RN. PMID: 31789500; PMCID: PMC9506602.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    64. OP 1.3 Single-cell transcriptome sequencing of latently-infected cells ex vivo using PCR-activated cell sorting (PACS). Journal of virus eradication. 2019 Dec 1; 5:1-2. Boritz BE, Clark CI, Abate AA, Quintana QF, Deeks DS, Douek DD. .
      View in: Publisher Site   Mentions:
    65. Combined Single-Cell DNA Genotyping and Protein Quantification (DAb-seq) in Acute Myeloid Leukemias Reveals Distinct Immunophenotypic Subsets Among Pathogenic Clones. Blood. 2019 Nov 13; 134(Supplement_1):2088-2088. Demaree DB, Delley DC, Peretz PC, Vasudevan VH, Ruff RD, Ooi OA, Smith SC, Abate AA. .
      View in: Publisher Site   Mentions:
    66. TMOD-27. A NEURAL CREST CELL SUBPOPULATION UNDERLIES INTRATUMOR HETEROGENEITY IN MENINGIOMA. Neuro-Oncology. 2019 Nov 11; 21(Supplement_6):vi268-vi268. Magill MS, Vasudevan VH, Seo SK, John Liu JS, Hilz HS, Villanueva-Meyer VJ, Choudhury CA, Demaree DB, Lim LD, Braunstein BS, Ann Oberheim-Bush AN, Ullian UE, Aghi AM, Theodosopoulos TP, Sneed SP, Abate AA, Berger BM, McDermott MM, Costello CJ, Raleigh RD. .
      View in: Publisher Site   Mentions:
    67. Uniform, Large-Area, Highly Ordered Peptoid Monolayer and Bilayer Films for Sensing Applications. Langmuir. 2019 10 22; 35(42):13671-13680. Murray DJ, Kim JH, Grzincic EM, Kim SC, Abate AR, Zuckermann RN. PMID: 31603340.
      View in: PubMed   Mentions: 5     Fields:    
    68. Human intestinal spheroids cultured using Sacrificial Micromolding as a model system for studying drug transport. Sci Rep. 2019 07 09; 9(1):9936. Samy KE, Levy ES, Phong K, Demaree B, Abate AR, Desai TA. PMID: 31289365; PMCID: PMC6616551.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    69. Abstract 3527: Combined high-throughput DNA genotyping and protein quantification in single cancer cells. Molecular and Cellular Biology / Genetics. 2019 Jul 1; 3527-3527. Demaree DB, Delley DC, Ruff RD, Treusch TS, Eastburn ED, Jones JK, Abate AA. .
      View in: Publisher Site   Mentions:
    70. HIGH-RESOLUTION CLONAL ANALYSIS OF TUMORS WITH SIMULTANEOUS SINGLE-CELL DNA SEQUENCING AND CELL SURFACE PHENOTYPING. HemaSphere. 2019 Jun 1; 3:439. Eastburn ED, Delley DC, Demaree DB, Dhingra DD, Mendez MP, Ruff RD, Abate AA. .
      View in: Publisher Site   Mentions:
    71. High throughput gene expression profiling of yeast colonies with microgel-culture Drop-seq. Lab Chip. 2019 05 14; 19(10):1838-1849. Liu L, Dalal CK, Heineike BM, Abate AR. PMID: 31020292; PMCID: PMC7909483.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    72. Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage. Nat Immunol. 2019 02; 20(2):163-172. Aran D, Looney AP, Liu L, Wu E, Fong V, Hsu A, Chak S, Naikawadi RP, Wolters PJ, Abate AR, Butte AJ, Bhattacharya M. PMID: 30643263; PMCID: PMC6340744.
      View in: PubMed   Mentions: 1328     Fields:    Translation:HumansAnimalsCells
    73. Direct quantification of EGFR variant allele frequency in cell-free DNA using a microfluidic-free digital droplet PCR assay. Methods Cell Biol. 2018; 148:119-131. Demaree B, Weisgerber D, Dolatmoradi A, Hatori M, Abate AR. PMID: 30473066.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    74. Microfluidic bead encapsulation above 20 kHz with triggered drop formation. Lab Chip. 2018 12 07; 18(23):3598-3605. Clark IC, Abate AR. PMID: 30362490; PMCID: PMC6251341.
      View in: PubMed   Mentions: 10     Fields:    
    75. Particle-Templated Emulsification for Microfluidics-Free Digital Biology. Anal Chem. 2018 08 21; 90(16):9813-9820. Hatori MN, Kim SC, Abate AR. PMID: 30033717; PMCID: PMC6122844.
      View in: PubMed   Mentions: 22     Fields:    Translation:Animals
    76. An Ultrahigh-throughput Microfluidic Platform for Single-cell Genome Sequencing. J Vis Exp. 2018 05 23; (135). Demaree B, Weisgerber D, Lan F, Abate AR. PMID: 29889211; PMCID: PMC6101372.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    77. An Ultrahigh-throughput Microfluidic Platform for Single-cell Genome Sequencing. Journal of Visualized Experiments. 2018 May 23; (135). Demaree DB, Weisgerber WD, Lan LF, Abate AA. .
      View in: Publisher Site   Mentions:
    78. An Oil-Free Picodrop Bioassay Platform for Synthetic Biology. Sci Rep. 2018 05 21; 8(1):7913. Siltanen CA, Cole RH, Poust S, Chao L, Tyerman J, Kaufmann-Malaga B, Ubersax J, Gartner ZJ, Abate AR. PMID: 29784937; PMCID: PMC5962535.
      View in: PubMed   Mentions: 9     Fields:    Translation:Animals
    79. A comparative analysis of single cell and droplet-based FACS for improving production phenotypes: Riboflavin overproduction in Yarrowia lipolytica. Metab Eng. 2018 05; 47:346-356. Wagner JM, Liu L, Yuan SF, Venkataraman MV, Abate AR, Alper HS. PMID: 29698778.
      View in: PubMed   Mentions: 17     Fields:    Translation:Animals
    80. Concentric electrodes improve microfluidic droplet sorting. Lab Chip. 2018 02 27; 18(5):710-713. Clark IC, Thakur R, Abate AR. PMID: 29383336; PMCID: PMC6105269.
      View in: PubMed   Mentions: 12     Fields:    Translation:Cells
    81. Combined aptamer and transcriptome sequencing of single cells. Sci Rep. 2018 02 13; 8(1):2919. Delley CL, Liu L, Sarhan MF, Abate AR. PMID: 29440771; PMCID: PMC5811598.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    82. Single-Cell RT-PCR in Microfluidic Droplets with Integrated Chemical Lysis. Anal Chem. 2018 01 16; 90(2):1273-1279. Kim SC, Clark IC, Shahi P, Abate AR. PMID: 29256243; PMCID: PMC5991602.
      View in: PubMed   Mentions: 35     Fields:    Translation:HumansCells
    83. Bulk double emulsification for flow cytometric analysis of microfluidic droplets. Analyst. 2017 Dec 04; 142(24):4618-4622. Sukovich DJ, Kim SC, Ahmed N, Abate AR. PMID: 29131209; PMCID: PMC5997486.
      View in: PubMed   Mentions: 8     Fields:    
    84. PP1.1 Whole genome sequencing of single HIV provirus and its proviral integration site for the study of HIV latency. Journal of virus eradication. 2017 Dec 1; 3:3-4. Sun SC, Mullins MJ, Abate AA. .
      View in: Publisher Site   Mentions:
    85. Cell-free extract based optimization of biomolecular circuits with droplet microfluidics. Lab Chip. 2017 09 12; 17(18):3037-3042. Hori Y, Kantak C, Murray RM, Abate AR. PMID: 28770936.
      View in: PubMed   Mentions: 14     Fields:    Translation:Cells
    86. RNA-aptamers-in-droplets (RAPID) high-throughput screening for secretory phenotypes. Nat Commun. 2017 08 23; 8(1):332. Abatemarco J, Sarhan MF, Wagner JM, Lin JL, Liu L, Hassouneh W, Yuan SF, Alper HS, Abate AR. PMID: 28835641; PMCID: PMC5569033.
      View in: PubMed   Mentions: 26     Fields:    Translation:Animals
    87. Printed droplet microfluidics for on demand dispensing of picoliter droplets and cells. Proc Natl Acad Sci U S A. 2017 08 15; 114(33):8728-8733. Cole RH, Tang SY, Siltanen CA, Shahi P, Zhang JQ, Poust S, Gartner ZJ, Abate AR. PMID: 28760972; PMCID: PMC5565430.
      View in: PubMed   Mentions: 50     Fields:    Translation:HumansCells
    88. Rapid, chemical-free breaking of microfluidic emulsions with a hand-held antistatic gun. Biomicrofluidics. 2017 Jul; 11(4):044107. Karbaschi M, Shahi P, Abate AR. PMID: 28794817; PMCID: PMC5519397.
      View in: PubMed   Mentions: 13  
    89. Measurement of copy number variation in single cancer cells using rapid-emulsification digital droplet MDA. Microsyst Nanoeng. 2017; 3. Kim SC, Premasekharan G, Clark IC, Gemeda HB, Paris PL, Abate AR. PMID: 30147985; PMCID: PMC6108428.
      View in: PubMed   Mentions: 4  
    90. Finding a helix in a haystack: nucleic acid cytometry with droplet microfluidics. Lab Chip. 2017 06 13; 17(12):2032-2045. Clark IC, Abate AR. PMID: 28540956; PMCID: PMC6005652.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    91. Single-cell genome sequencing at ultra-high-throughput with microfluidic droplet barcoding. Nat Biotechnol. 2017 Jul; 35(7):640-646. Lan F, Demaree B, Ahmed N, Abate AR. PMID: 28553940; PMCID: PMC5531050.
      View in: PubMed   Mentions: 141     Fields:    
    92. Efficient extraction of oil from droplet microfluidic emulsions. Biomicrofluidics. 2017 May; 11(3):034111. Haliburton JR, Kim SC, Clark IC, Sperling RA, Weitz DA, Abate AR. PMID: 28611871; PMCID: PMC5438281.
      View in: PubMed   Mentions: 5  
    93. Abseq: Ultrahigh-throughput single cell protein profiling with droplet microfluidic barcoding. Sci Rep. 2017 03 14; 7:44447. Shahi P, Kim SC, Haliburton JR, Gartner ZJ, Abate AR. PMID: 28290550; PMCID: PMC5349531.
      View in: PubMed   Mentions: 106     Fields:    Translation:Humans
    94. Genetic interaction mapping with microfluidic-based single cell sequencing. PLoS One. 2017; 12(2):e0171302. Haliburton JR, Shao W, Deutschbauer A, Arkin A, Abate AR. PMID: 28170417; PMCID: PMC5295688.
      View in: PubMed   Mentions: 6     Fields:    
    95. Sequence specific sorting of DNA molecules with FACS using 3dPCR. Sci Rep. 2017 01 04; 7:39385. Sukovich DJ, Lance ST, Abate AR. PMID: 28051104; PMCID: PMC5209659.
      View in: PubMed   Mentions: 13     Fields:    
    96. Rapid Encapsulation of Cell and Polymer Solutions with Bubble-Triggered Droplet Generation. Macromolecular Chemistry and Physics. 2017 Jan 1; 218(2):1600297. Yan YZ, Clark CI, Abate AA. .
      View in: Publisher Site   Mentions:
    97. PCR-activated cell sorting as a general, cultivation-free method for high-throughput identification and enrichment of virus hosts. J Virol Methods. 2017 04; 242:14-21. Lim SW, Lance ST, Stedman KM, Abate AR. PMID: 28042018; PMCID: PMC5531043.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    98. Peering below the diffraction limit: robust and specific sorting of viruses with flow cytometry. Virol J. 2016 12 01; 13(1):201. Lance ST, Sukovich DJ, Stedman KM, Abate AR. PMID: 27906039; PMCID: PMC5131442.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    99. Operation of Droplet-Microfluidic Devices with a Lab Centrifuge. Micromachines (Basel). 2016 Sep 06; 7(9). Ahmed N, Sukovich D, Abate AR. PMID: 30404331; PMCID: PMC6190000.
      View in: PubMed   Mentions: 5  
    100. Droplet barcoding for massively parallel single-molecule deep sequencing. Nat Commun. 2016 06 29; 7:11784. Lan F, Haliburton JR, Yuan A, Abate AR. PMID: 27353563; PMCID: PMC4931254.
      View in: PubMed   Mentions: 38     Fields:    
    101. Multicolor Fluorescence Detection for Droplet Microfluidics Using Optical Fibers. J Vis Exp. 2016 05 05; (111). Cole RH, Gartner ZJ, Abate AR. PMID: 27214249; PMCID: PMC4942052.
      View in: PubMed   Mentions: 9     Fields:    
    102. Multicolor Fluorescence Detection for Droplet Microfluidics Using Optical Fibers. Journal of Visualized Experiments. 2016 May 5; (111). Cole CR, Gartner GZ, Abate AA. .
      View in: Publisher Site   Mentions:
    103. Electrical lysis of cells for detergent-free droplet assays. Biomicrofluidics. 2016 Mar; 10(2):024114. de Lange N, Tran TM, Abate AR. PMID: 27051471; PMCID: PMC4808063.
      View in: PubMed   Mentions: 9  
    104. Double Emulsion Generation Using a Polydimethylsiloxane (PDMS) Co-axial Flow Focus Device. J Vis Exp. 2015 Dec 25; (106):e53516. Cole RH, Tran TM, Abate AR. PMID: 26780079; PMCID: PMC4780863.
      View in: PubMed   Mentions: 3     Fields:    
    105. Enhanced sequencing coverage with digital droplet multiple displacement amplification. Nucleic Acids Res. 2016 Apr 20; 44(7):e66. Sidore AM, Lan F, Lim SW, Abate AR. PMID: 26704978; PMCID: PMC4838355.
      View in: PubMed   Mentions: 39     Fields:    Translation:Cells
    106. Patterning microfluidic device wettability with spatially-controlled plasma oxidation. Lab Chip. 2015 Aug 07; 15(15):3163-9. Kim SC, Sukovich DJ, Abate AR. PMID: 26105774; PMCID: PMC5531047.
      View in: PubMed   Mentions: 16     Fields:    Translation:Cells
    107. Compact and modular multicolour fluorescence detector for droplet microfluidics. Lab Chip. 2015 Jul 07; 15(13):2754-8. Cole RH, de Lange N, Gartner ZJ, Abate AR. PMID: 26032595; PMCID: PMC4505729.
      View in: PubMed   Mentions: 9     Fields:    
    108. Dissecting enzyme function with microfluidic-based deep mutational scanning. Proc Natl Acad Sci U S A. 2015 Jun 09; 112(23):7159-64. Romero PA, Tran TM, Abate AR. PMID: 26040002; PMCID: PMC4466731.
      View in: PubMed   Mentions: 90     Fields:    
    109. Microfluidic droplet enrichment for targeted sequencing. Nucleic Acids Res. 2015 Jul 27; 43(13):e86. Eastburn DJ, Huang Y, Pellegrino M, Sciambi A, Ptácek LJ, Abate AR. PMID: 25873629; PMCID: PMC4513844.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    110. PCR-activated cell sorting for cultivation-free enrichment and sequencing of rare microbes. PLoS One. 2015; 10(1):e0113549. Lim SW, Tran TM, Abate AR. PMID: 25629401; PMCID: PMC4309575.
      View in: PubMed   Mentions: 22     Fields:    Translation:Cells
    111. Rapid modulation of droplet composition with pincer microvalves. Lab Chip. 2015 Jan 07; 15(1):52-6. Ochs CJ, Abate AR. PMID: 25385230; PMCID: PMC5531040.
      View in: PubMed   Mentions: 5     Fields:    
    112. Accurate microfluidic sorting of droplets at 30 kHz. Lab Chip. 2015 Jan 07; 15(1):47-51. Sciambi A, Abate AR. PMID: 25352174; PMCID: PMC4256106.
      View in: PubMed   Mentions: 68     Fields:    
    113. Subclonal mutations in SETBP1 confer a poor prognosis in juvenile myelomonocytic leukemia. Blood. 2015 Jan 15; 125(3):516-24. Stieglitz E, Troup CB, Gelston LC, Haliburton J, Chow ED, Yu KB, Akutagawa J, Taylor-Weiner AN, Liu YL, Wang YD, Beckman K, Emanuel PD, Braun BS, Abate A, Gerbing RB, Alonzo TA, Loh ML. PMID: 25395418; PMCID: PMC4296011.
      View in: PubMed   Mentions: 37     Fields:    Translation:Humans
    114. Identification and genetic analysis of cancer cells with PCR-activated cell sorting. Nucleic Acids Res. 2014; 42(16):e128. Eastburn DJ, Sciambi A, Abate AR. PMID: 25030902; PMCID: PMC4176366.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    115. Picoinjection of microfluidic drops without metal electrodes. J Vis Exp. 2014 Apr 18; (86). O'Donovan B, Tran T, Sciambi A, Abate A. PMID: 24797680; PMCID: PMC4172202.
      View in: PubMed   Mentions: 1     Fields:    
    116. Generating electric fields in PDMS microfluidic devices with salt water electrodes. Lab Chip. 2014 Aug 07; 14(15):2605-9. Sciambi A, Abate AR. PMID: 24671446; PMCID: PMC4079735.
      View in: PubMed   Mentions: 40     Fields:    
    117. Coaxial flow focusing in poly(dimethylsiloxane) microfluidic devices. Biomicrofluidics. 2014 Jan; 8(1):016502. Tran TM, Cater S, Abate AR. PMID: 24753732; PMCID: PMC3977865.
      View in: PubMed   Mentions: 10  
    118. DNA sequence analysis with droplet-based microfluidics. Lab Chip. 2013 Dec 21; 13(24):4864-9. Abate AR, Hung T, Sperling RA, Mary P, Rotem A, Agresti JJ, Weiner MA, Weitz DA. PMID: 24185402; PMCID: PMC4090915.
      View in: PubMed   Mentions: 26     Fields:    Translation:Cells
    119. Ultrahigh-throughput sorting of microfluidic drops with flow cytometry. Lab Chip. 2013 Dec 07; 13(23):4563-72. Lim SW, Abate AR. PMID: 24146020.
      View in: PubMed   Mentions: 28     Fields:    Translation:Animals
    120. Ultrahigh-throughput Mammalian single-cell reverse-transcriptase polymerase chain reaction in microfluidic drops. Anal Chem. 2013 Aug 20; 85(16):8016-21. Eastburn DJ, Sciambi A, Abate AR. PMID: 23885761.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansCells
    121. Adding reagent to droplets with controlled rupture of encapsulated double emulsions. Biomicrofluidics. 2013; 7(4):44112. Sciambi A, Abate AR. PMID: 24404045; PMCID: PMC3751951.
      View in: PubMed   Mentions: 5  
    122. Picoinjection enables digital detection of RNA with droplet rt-PCR. PLoS One. 2013; 8(4):e62961. Eastburn DJ, Sciambi A, Abate AR. PMID: 23658657; PMCID: PMC3637249.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansCells
    123. Block-and-break generation of microdroplets with fixed volume. Biomicrofluidics. 2013; 7(2):24108. van Steijn V, Korczyk PM, Derzsi L, Abate AR, Weitz DA, Garstecki P. PMID: 24404013; PMCID: PMC3637280.
      View in: PubMed   Mentions: 7  
    124. From tubes to drops: droplet-based microfluidics for ultrahigh-throughput biology. Journal of Physics D. 2013 Mar 20; 46(11):114004. Tran TT, Lan LF, Thompson TC, Abate AA. .
      View in: Publisher Site   Mentions:
    125. Adhesive-based bonding technique for PDMS microfluidic devices. Lab Chip. 2013 Feb 21; 13(4):632-5. Thompson CS, Abate AR. PMID: 23282717.
      View in: PubMed   Mentions: 15     Fields:    
    126. Flow focusing geometry generates droplets through a plug and squeeze mechanism. Lab Chip. 2012 Dec 21; 12(24):5130-2. Romero PA, Abate AR. PMID: 23117576.
      View in: PubMed   Mentions: 5     Fields:    
    127. Drop formation in non-planar microfluidic devices. Lab Chip. 2012 Nov 07; 12(21):4263-8. Rotem A, Abate AR, Utada AS, Van Steijn V, Weitz DA. PMID: 22864475.
      View in: PubMed   Mentions: 19     Fields:    
    128. Electrode-free picoinjection of microfluidic drops. Lab Chip. 2012 Oct 21; 12(20):4029-32. O'Donovan B, Eastburn DJ, Abate AR. PMID: 22930333.
      View in: PubMed   Mentions: 19     Fields:    
    129. Microfluidic synthesis of advanced microparticles for encapsulation and controlled release. Lab Chip. 2012 Jun 21; 12(12):2135-45. Duncanson WJ, Lin T, Abate AR, Seiffert S, Shah RK, Weitz DA. PMID: 22510961.
      View in: PubMed   Mentions: 53     Fields:    
    130. Experimental validation of plugging during drop formation in a T-junction. Lab Chip. 2012 Apr 21; 12(8):1516-21. Abate AR, Mary P, van Steijn V, Weitz DA. PMID: 22402628.
      View in: PubMed   Mentions: 6     Fields:    
    131. High throughput production of single core double emulsions in a parallelized microfluidic device. Lab Chip. 2012 Feb 21; 12(4):802-7. Romanowsky MB, Abate AR, Rotem A, Holtze C, Weitz DA. PMID: 22222423.
      View in: PubMed   Mentions: 49     Fields:    
    132. Measuring the elastic modulus of microgels using microdrops. Soft Matter. 2012 Jan 1; 8(39):10032-10035. Abate AA, Han HL, Jin JL, Suo SZ, Weitz WD. .
      View in: Publisher Site   Mentions:
    133. Non-coalescence of oppositely charged droplets in pH-sensitive emulsions. Proc Natl Acad Sci U S A. 2012 Jan 10; 109(2):384-9. Liu T, Seiffert S, Thiele J, Abate AR, Weitz DA, Richtering W. PMID: 22203968; PMCID: PMC3258642.
      View in: PubMed   Mentions: 8     Fields:    
    134. Efficient encapsulation with plug-triggered drop formation. Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Sep; 84(3 Pt 1):031502. Abate AR, Rotem A, Thiele J, Weitz DA. PMID: 22060374.
      View in: PubMed   Mentions: 1     Fields:    
    135. Observation of spatial propagation of amyloid assembly from single nuclei. Proc Natl Acad Sci U S A. 2011 Sep 06; 108(36):14746-51. Knowles TP, White DA, Abate AR, Agresti JJ, Cohen SI, Sperling RA, De Genst EJ, Dobson CM, Weitz DA. PMID: 21876182; PMCID: PMC3169119.
      View in: PubMed   Mentions: 53     Fields:    Translation:HumansAnimals
    136. Early development drug formulation on a chip: fabrication of nanoparticles using a microfluidic spray dryer. Lab Chip. 2011 Jul 21; 11(14):2362-8. Thiele J, Windbergs M, Abate AR, Trebbin M, Shum HC, Förster S, Weitz DA. PMID: 21617823.
      View in: PubMed   Mentions: 3     Fields:    
    137. On-chip background noise reduction for cell-based assays in droplets. Lab Chip. 2011 Jun 21; 11(12):2066-70. Mary P, Chen A, Chen I, Abate AR, Weitz DA. PMID: 21541376.
      View in: PubMed   Mentions: 9     Fields:    Translation:Animals
    138. Faster multiple emulsification with drop splitting. Lab Chip. 2011 Jun 07; 11(11):1911-5. Abate AR, Weitz DA. PMID: 21505660.
      View in: PubMed   Mentions: 20     Fields:    
    139. Controlling droplet incubation using close-packed plug flow. Biomicrofluidics. 2011 Apr 04; 5(2):24101. Mary P, Abate AR, Agresti JJ, Weitz DA. PMID: 21544238; PMCID: PMC3085533.
      View in: PubMed   Mentions: 5  
    140. Air-bubble-triggered drop formation in microfluidics. Lab Chip. 2011 May 21; 11(10):1713-6. Abate AR, Weitz DA. PMID: 21448493.
      View in: PubMed   Mentions: 7     Fields:    
    141. Syringe-vacuum microfluidics: A portable technique to create monodisperse emulsions. Biomicrofluidics. 2011 Mar 16; 5:14107. Abate AR, Weitz DA. PMID: 21483661; PMCID: PMC3073010.
      View in: PubMed   Mentions: 17  
    142. Synthesis of monodisperse microparticles from non-Newtonian polymer solutions with microfluidic devices. Adv Mater. 2011 Apr 19; 23(15):1757-60. Abate AR, Kutsovsky M, Seiffert S, Windbergs M, Pinto LF, Rotem A, Utada AS, Weitz DA. PMID: 21394794.
      View in: PubMed   Mentions: 21     Fields:    
    143. One-step formation of multiple emulsions in microfluidics. Lab Chip. 2011 Jan 21; 11(2):253-8. Abate AR, Thiele J, Weitz DA. PMID: 20967395.
      View in: PubMed   Mentions: 23     Fields:    
    144. High-throughput injection with microfluidics using picoinjectors. Proc Natl Acad Sci U S A. 2010 Nov 09; 107(45):19163-6. Abate AR, Hung T, Mary P, Agresti JJ, Weitz DA. PMID: 20962271; PMCID: PMC2984161.
      View in: PubMed   Mentions: 150     Fields:    
    145. Fabrication of polymersomes using double-emulsion templates in glass-coated stamped microfluidic devices. Small. 2010 Aug 16; 6(16):1723-7. Thiele J, Abate AR, Shum HC, Bachtler S, Förster S, Weitz DA. PMID: 20665757.
      View in: PubMed   Mentions: 14     Fields:    
    146. Patterning microfluidic device wettability using flow confinement. Lab Chip. 2010 Jul 21; 10(14):1774-6. Abate AR, Thiele J, Weinhart M, Weitz DA. PMID: 20490412.
      View in: PubMed   Mentions: 18     Fields:    
    147. Microfluidic sorting with high-speed single-layer membrane valves. Applied Physics Letters. 2010 May 17; 96(20):203509. Abate AA, Agresti AJ, Weitz WD. .
      View in: Publisher Site   Mentions:
    148. Smart microgel capsules from macromolecular precursors. J Am Chem Soc. 2010 May 12; 132(18):6606-9. Seiffert S, Thiele J, Abate AR, Weitz DA. PMID: 20397695.
      View in: PubMed   Mentions: 21     Fields:    
    149. Functional patterning of PDMS microfluidic devices using integrated chemo-masks. Lab Chip. 2010 Jun 21; 10(12):1521-4. Romanowsky MB, Heymann M, Abate AR, Krummel AT, Fraden S, Weitz DA. PMID: 20454730.
      View in: PubMed   Mentions: 3     Fields:    
    150. Ultrahigh-throughput screening in drop-based microfluidics for directed evolution. Proc Natl Acad Sci U S A. 2010 Mar 02; 107(9):4004-9. Agresti JJ, Antipov E, Abate AR, Ahn K, Rowat AC, Baret JC, Marquez M, Klibanov AM, Griffiths AD, Weitz DA. PMID: 20142500; PMCID: PMC2840095.
      View in: PubMed   Mentions: 289     Fields:    
    151. High-throughput fluorescence detection using an integrated zone-plate array. Lab Chip. 2010 Apr 07; 10(7):852-6. Schonbrun E, Abate AR, Steinvurzel PE, Weitz DA, Crozier KB. PMID: 20300671.
      View in: PubMed   Mentions: 15     Fields:    
    152. Droplet microfluidics for fabrication of non-spherical particles. Macromol Rapid Commun. 2010 Jan 18; 31(2):108-18. Shum HC, Abate AR, Lee D, Studart AR, Wang B, Chen CH, Thiele J, Shah RK, Krummel A, Weitz DA. PMID: 21590882.
      View in: PubMed   Mentions: 25     Fields:    
    153. Multiple emulsions: Small 18/2009. Small. 2009 Sep 18; 5(18):na-na. Abate AA, Weitz WD. .
      View in: Publisher Site   Mentions:
    154. High-order multiple emulsions formed in poly(dimethylsiloxane) microfluidics. Small. 2009 Sep; 5(18):2030-2. Abate AR, Weitz DA. PMID: 19554565.
      View in: PubMed   Mentions: 25     Fields:    
    155. Magnetic Hydrogel Particles: Microfluidic Assembly of Magnetic Hydrogel Particles with Uniformly Anisotropic Structure (Adv. Mater. 31/2009). Advanced Materials. 2009 Aug 21; 21(31):na-na. Chen CC, Abate AA, Lee LD, Terentjev TE, Weitz WD. .
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    156. Microfluidic Assembly of Magnetic Hydrogel Particles with Uniformly Anisotropic Structure. Advanced Materials. 2009 Aug 21; 21(31):3201-3204. Chen CC, Abate AA, Lee LD, Terentjev TE, Weitz WD. .
      View in: Publisher Site   Mentions:
    157. Impact of inlet channel geometry on microfluidic drop formation. Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Aug; 80(2 Pt 2):026310. Abate AR, Poitzsch A, Hwang Y, Lee J, Czerwinska J, Weitz DA. PMID: 19792252.
      View in: PubMed   Mentions: 22     Fields:    
    158. A multi-color fast-switching microfluidic droplet dye laser. Lab Chip. 2009 Oct 07; 9(19):2767-71. Tang SK, Li Z, Abate AR, Agresti JJ, Weitz DA, Psaltis D, Whitesides GM. PMID: 19967111.
      View in: PubMed   Mentions: 28     Fields:    
    159. Beating Poisson encapsulation statistics using close-packed ordering. Lab Chip. 2009 Sep 21; 9(18):2628-31. Abate AR, Chen CH, Agresti JJ, Weitz DA. PMID: 19704976.
      View in: PubMed   Mentions: 55     Fields:    
    160. Surface acoustic wave (SAW) directed droplet flow in microfluidics for PDMS devices. Lab Chip. 2009 Sep 21; 9(18):2625-7. Franke T, Abate AR, Weitz DA, Wixforth A. PMID: 19704975.
      View in: PubMed   Mentions: 61     Fields:    
    161. Janus particles templated from double emulsion droplets generated using microfluidics. Langmuir. 2009 Apr 21; 25(8):4320-3. Chen CH, Shah RK, Abate AR, Weitz DA. PMID: 19366216.
      View in: PubMed   Mentions: 12     Fields:    
    162. Valve-based flow focusing for drop formation. Applied Physics Letters. 2009 Jan 12; 94(2):023503. Abate AA, Romanowsky RM, Agresti AJ, Weitz WD. .
      View in: Publisher Site   Mentions:
    163. Effective temperatures and activated dynamics for a two-dimensional air-driven granular system on two approaches to jamming. Phys Rev Lett. 2008 Dec 12; 101(24):245701. Abate AR, Durian DJ. PMID: 19113632.
      View in: PubMed   Mentions: 4     Fields:    
    164. Photoreactive coating for high-contrast spatial patterning of microfluidic device wettability. Lab Chip. 2008 Dec; 8(12):2157-60. Abate AR, Krummel AT, Lee D, Marquez M, Holtze C, Weitz DA. PMID: 19023480.
      View in: PubMed   Mentions: 15     Fields:    
    165. Single-layer membrane valves for elastomeric microfluidic devices. Applied Physics Letters. 2008 Jun 16; 92(24):243509. Abate AA, Weitz WD. .
      View in: Publisher Site   Mentions:
    166. Glass coating for PDMS microfluidic channels by sol-gel methods. Lab Chip. 2008 Apr; 8(4):516-8. Abate AR, Lee D, Do T, Holtze C, Weitz DA. PMID: 18369504.
      View in: PubMed   Mentions: 55     Fields:    
    167. Avalanche statistics and time-resolved grain dynamics for a driven heap. Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Dec; 76(6 Pt 1):061301. Abate AR, Katsuragi H, Durian DJ. PMID: 18233839.
      View in: PubMed   Mentions: 1     Fields:    
    168. Spatially heterogeneous dynamics in a granular system near jamming. Chaos. 2007 Dec; 17(4):041107. Abate AR, Durian DJ. PMID: 18163762.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    169. Topological persistence and dynamical heterogeneities near jamming. Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Aug; 76(2 Pt 1):021306. Abate AR, Durian DJ. PMID: 17930032.
      View in: PubMed   Mentions: 7     Fields:    
    170. Approach to jamming in an air-fluidized granular bed. Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Sep; 74(3 Pt 1):031308. Abate AR, Durian DJ. PMID: 17025624.
      View in: PubMed   Mentions: 4     Fields:    
    171. Partition of energy for air-fluidized grains. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Sep; 72(3 Pt 1):031305. Abate AR, Durian DJ. PMID: 16241424.
      View in: PubMed   Mentions: 1     Fields:    
    172. Penetration depth for shallow impact cratering. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 May; 71(5 Pt 1):051305. Ambroso MA, Santore CR, Abate AR, Durian DJ. PMID: 16089526.
      View in: PubMed   Mentions: 3     Fields:    
    173. Statistical characterization of the forces on spheres in an upflow of air. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Jan; 71(1 Pt 2):016313. Ojha RP, Abate AR, Durian DJ. PMID: 15697728.
      View in: PubMed   Mentions: 1     Fields:    
    174. Protease inhibitors protect macrophages from lipopolysaccharide-induced cytotoxicity: possible role for NF-kappaB. Life Sci. 1998; 62(12):1081-8. Abate A, Schröder H. PMID: 9519810.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    175. Aspirin protects endothelial cells from oxidative stress--possible synergism with vitamin E. FEBS Lett. 1997 Nov 17; 417(3):349-51. Podhaisky HP, Abate A, Polte T, Oberle S, Schröder H. PMID: 9409749.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    176. Photoactivation of the nitric oxide donor SIN-1. FEBS Lett. 1997 Apr 07; 406(1-2):66-8. Ullrich T, Oberle S, Abate A, Schröder H. PMID: 9109387.
      View in: PubMed   Mentions: 6     Fields:    
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