Nancy Joseph, MD, PhD

Title(s)Professor, Pathology
SchoolSchool of Medicine
Address505 Parnassus Avenue, #M559
San Francisco CA 94117
Phone415-502-6359
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    Collapse Research 
    Collapse Research Activities and Funding
    Neural stem cells in DRG and neurofibromatosis type 1
    NIH F30NS049761Jul 1, 2004 - Jun 30, 2007
    Role: Principal Investigator

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    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. ORAOV1, CCND1, and MIR548K Are the Driver Oncogenes of the 11q13 Amplicon in Squamous Cell Carcinoma. Mol Cancer Res. 2024 Feb 01; 22(2):152-168. Mahieu CI, Mancini AG, Vikram EP, Planells-Palop V, Joseph NM, Tward AD. PMID: 37930255; PMCID: PMC10831340.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    2. Focal nodular hyperplasia-like nodules arising in the setting of hepatic vascular disorders with portosystemic shunting show β-catenin activation. Hum Pathol. 2023 Dec; 142:20-26. Umetsu SE, Joseph NM, Cho SJ, Morotti R, Deshpande V, Jain D, Kakar S. PMID: 37806391.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    3. Genomic Analysis in the Categorization of Poorly Differentiated Primary Liver Carcinomas. Am J Surg Pathol. 2023 11 01; 47(11):1207-1218. Kikuchi AT, Umetsu S, Joseph N, Kakar S. PMID: 37661782.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    4. Baseline tumor growth rate highlights the heterogeneity of well differentiated gastroenteropancreatic neuroendocrine tumors and predicts for increases in Ki67 index over time. J Neuroendocrinol. 2023 04; 35(4):e13260. Wang SJ, Whitman J, Paciorek A, Le BK, Nakakura EK, Behr SC, Joseph N, Zhang L, Hope TA, Bergsland EK. PMID: 37002881.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    5. Incidental Langerhans cell histiocytosis associated with metastatic neuroendocrine tumor in the adult liver. Clin Case Rep. 2023 Feb; 11(2):e6922. Joseph NM, Wen KW. PMID: 36789329; PMCID: PMC9909255.
      View in: PubMed   Mentions:
    6. Triple-Negative Apocrine Carcinomas: Toward a Unified Group With Shared Molecular Features and Clinical Behavior. Mod Pathol. 2023 05; 36(5):100125. Schwartz CJ, Ruiz J, Bean GR, Sirohi D, Joseph NM, Hosfield EM, Jacobs TW, Mukhtar RA, Chen YY, Krings G. PMID: 36870308.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    7. Integrated Genomic and Clinicopathologic Approach Distinguishes Pancreatic Grade 3 Neuroendocrine Tumor From Neuroendocrine Carcinoma and Identifies a Subset With Molecular Overlap. Mod Pathol. 2023 03; 36(3):100065. Umetsu SE, Kakar S, Basturk O, Kim GE, Chatterjee D, Wen KW, Hale G, Shafizadeh N, Cho SJ, Whitman J, Gill RM, Jones KD, Navale P, Bergsland E, Klimstra D, Joseph NM. PMID: 36788102.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    8. Uterine Inflammatory Myofibroblastic Tumors: Proposed Risk Stratification Model Using Integrated Clinicopathologic and Molecular Analysis. Am J Surg Pathol. 2023 02 01; 47(2):157-171. Ladwig NR, Bean GR, Pekmezci M, Boscardin J, Joseph NM, Therrien N, Sangoi AR, Piening B, Rajamanickam V, Galvin M, Bernard B, Zaloudek C, Rabban JT, Garg K, Umetsu SE. PMID: 36344483.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    9. Malignant hepatic vascular neoplasm with novel RAF1 and GNA11 mutations: Risk stratification considerations for hepatic small vessel neoplasm (HSVN). Human Pathology Reports. 2022 Sep 1; 29:300671. Akanuma AN, Joseph JN, Stachler SM, Behr BS, Takahashi TT, Gill GR. .
      View in: Publisher Site   Mentions:
    10. Checkpoint Inhibitor Immunotherapy to Treat Temozolomide-Associated Hypermutation in Advanced Atypical Carcinoid Tumor of the Lung. JCO Precis Oncol. 2022 06; 6:e2200009. Sun F, Grenert JP, Tan L, Van Ziffle J, Joseph NM, Mulvey CK, Bergsland E. PMID: 35737914; PMCID: PMC9249272.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    11. APOBEC Mutational Signature and Tumor Mutational Burden as Predictors of Clinical Outcomes and Treatment Response in Patients With Advanced Urothelial Cancer. Front Oncol. 2022; 12:816706. Natesan D, Zhang L, Martell HJ, Jindal T, Devine P, Stohr B, Espinosa-Mendez C, Grenert J, Van Ziffle J, Joseph N, Umetsu S, Onodera C, Turski M, Chan E, Desai A, Aggarwal R, Wong A, Porten S, Chou J, Friedlander T, Fong L, Small EJ, Sweet-Cordero A, Koshkin VS. PMID: 35321431; PMCID: PMC8935010.
      View in: PubMed   Mentions: 3  
    12. Hepatocellular neoplasms with loss of liver fatty acid binding protein: Clinicopathologic features and molecular profiling. Hum Pathol. 2022 04; 122:60-71. Joseph NM, Blank A, Shain AH, Gill RM, Umetsu SE, Shafizadeh N, Torbenson MS, Kakar S. PMID: 35104461.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    13. Tumor DNA requirements for accurate epigenetic-based classification of CNS neoplasia. Neuro Oncol. 2021 10 01; 23(10):1798-1800. Wu J, Gupta R, Barreto J, Doo P, Joseph NM, Lee JC, Perry A, Chang SM, Berger MS, Solomon DA. PMID: 34351421; PMCID: PMC8485446.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    14. Phase II Trial of the Combination of Temsirolimus and Sorafenib in Advanced Hepatocellular Carcinoma with Tumor Mutation Profiling. Liver Cancer. 2021 Nov; 10(6):561-571. Kelley RK, Joseph NM, Nimeiri HS, Hwang J, Kulik LM, Ngo Z, Behr SC, Onodera C, Zhang K, Bocobo AG, Benson AB, Venook AP, Gordan JD. PMID: 34950179; PMCID: PMC8647100.
      View in: PubMed   Mentions: 7  
    15. Inhibin-positive hepatic carcinoma: proposal for a solid-tubulocystic variant of intrahepatic cholangiocarcinoma. Hum Pathol. 2021 10; 116:82-93. Wen KW, Joseph NM, Srivastava A, Saunders TA, Jain D, Rank J, Feely M, Zarrinpar A, Al Diffalha S, Shyn PB, Graham RP, Drage MG, Kakar S. PMID: 34298064.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    16. Genomic Profiling of Low-grade Intramedullary Cartilage Tumors Can Distinguish Enchondroma From Chondrosarcoma. Am J Surg Pathol. 2021 06 01; 45(6):812-819. Joseph NM, McGill KC, Horvai AE. PMID: 33239505.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    17. Pancreatic ductal adenocarcinoma progression is restrained by stromal matrix. J Clin Invest. 2020 09 01; 130(9):4704-4709. Jiang H, Torphy RJ, Steiger K, Hongo H, Ritchie AJ, Kriegsmann M, Horst D, Umetsu SE, Joseph NM, McGregor K, Pishvaian MJ, Blais EM, Lu B, Li M, Hollingsworth M, Stashko C, Volmar K, Yeh JJ, Weaver VM, Wang ZJ, Tempero MA, Weichert W, Collisson EA. PMID: 32749238; PMCID: PMC7456216.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansAnimalsCells
    18. APOBEC signatures and high tumour mutational burden as predictors of clinical outcomes and response to therapy in patients with urothelial carcinoma. Annals of Oncology. 2020 Sep 1; 31:s593. Natesan ND, Zhang ZL, Martell MH, Devine DP, Stohr SB, Grenert GJ, Van Ziffle VJ, Joseph JN, Bastian BB, Umetsu US, Onodera OC, Chan CE, Desai DA, Porten PS, Chou CJ, Friedlander FT, Fong FL, Small SE, Sweet-Cordero SA, Koshkin KV. .
      View in: Publisher Site   Mentions:
    19. Correlation of tumor mutational burden (TMB) with molecular profiling and clinical characteristics in patients with bladder cancer. Journal of Clinical Oncology. 2020 May 20; 38(15_suppl):e17025-e17025. Natesan ND, Martell MH, Devine DP, Stohr SB, Grenert GJ, Van Ziffle VJ, Joseph JN, Bastian BB, Umetsu US, Onodera OC, Chan CE, Desai DA, Wong WA, Porten PS, Chou CJ, Friedlander FT, Small SE, Fong FL, Sweet-Cordero SE, Koshkin KV. .
      View in: Publisher Site   Mentions:
    20. Complete Response and Immune-Mediated Adverse Effects With Checkpoint Blockade: Treatment of Mismatch Repair-Deficient Colorectal Neuroendocrine Carcinoma. JCO Precis Oncol. 2019 Dec; 3:1-7. Whitman J, Kardosh A, Diaz L, Fong L, Hope T, Onodera C, Joseph N, Le D, Fisher G, Bergsland E. PMID: 35100735.
      View in: PubMed   Mentions: 1     Fields:    
    21. MicroRNA Ratios Distinguish Melanomas from Nevi. J Invest Dermatol. 2020 01; 140(1):164-173.e7. Torres R, Lang UE, Hejna M, Shelton SJ, Joseph NM, Shain AH, Yeh I, Wei ML, Oldham MC, Bastian BC, Judson-Torres RL. PMID: 31580842; PMCID: PMC6926155.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    22. DNA flow cytometric and interobserver study of crypt cell atypia in inflammatory bowel disease. Histopathology. 2019 Oct; 75(4):578-588. Wen KW, Umetsu SE, Goldblum JR, Gill RM, Kim GE, Joseph NM, Rabinovitch PS, Kakar S, Lauwers GY, Choi WT. PMID: 31111543.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    23. Whole-genome landscape of mucosal melanoma reveals diverse drivers and therapeutic targets. Nat Commun. 2019 07 18; 10(1):3163. Newell F, Kong Y, Wilmott JS, Johansson PA, Ferguson PM, Cui C, Li Z, Kazakoff SH, Burke H, Dodds TJ, Patch AM, Nones K, Tembe V, Shang P, van der Weyden L, Wong K, Holmes O, Lo S, Leonard C, Wood S, Xu Q, Rawson RV, Mukhopadhyay P, Dummer R, Levesque MP, Jönsson G, Wang X, Yeh I, Wu H, Joseph N, Bastian BC, Long GV, Spillane AJ, Shannon KF, Thompson JF, Saw RPM, Adams DJ, Si L, Pearson JV, Hayward NK, Waddell N, Mann GJ, Guo J, Scolyer RA. PMID: 31320640; PMCID: PMC6639323.
      View in: PubMed   Mentions: 95     Fields:    Translation:HumansCells
    24. Genomic profiling of well-differentiated hepatocellular neoplasms with diffuse glutamine synthetase staining reveals similar genetics across the adenoma to carcinoma spectrum. Mod Pathol. 2019 11; 32(11):1627-1636. Joseph NM, Umetsu SE, Shafizadeh N, Ferrell L, Kakar S. PMID: 31189995.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    25. Immunohistochemical and molecular features of cholangiolocellular carcinoma are similar to well-differentiated intrahepatic cholangiocarcinoma. Mod Pathol. 2019 10; 32(10):1486-1494. Balitzer D, Joseph NM, Ferrell L, Shafizadeh N, Jain D, Zhang X, Yeh M, di Tommaso L, Kakar S. PMID: 31186529.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    26. 786 A machine-learning classifier trained with microRNA ratios to distinguish melanomas from nevi. Journal of Investigative Dermatology. 2019 May 1; 139(5):s136. Torres TR, Lang LU, Joseph JN, Shain SA, Yeh YI, Wei WM, Oldham OM, Bastian BB, Judson-Torres JR. .
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    27. Next-Generation Sequencing of Uveal Melanoma for Detection of Genetic Alterations Predicting Metastasis. Transl Vis Sci Technol. 2019 Mar; 8(2):18. Afshar AR, Damato BE, Stewart JM, Zablotska LB, Roy R, Olshen AB, Joseph NM, Bastian BC. PMID: 31024753; PMCID: PMC6472431.
      View in: PubMed   Mentions: 18     Fields:    
    28. Genomic profiling of combined hepatocellular-cholangiocarcinoma reveals similar genetics to hepatocellular carcinoma. J Pathol. 2019 06; 248(2):164-178. Joseph NM, Tsokos CG, Umetsu SE, Shain AH, Kelley RK, Onodera C, Bowman S, Talevich E, Ferrell LD, Kakar S, Krings G. PMID: 30690729.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansCells
    29. Cross-species genomic landscape comparison of human mucosal melanoma with canine oral and equine melanoma. Nat Commun. 2019 01 21; 10(1):353. Wong K, van der Weyden L, Schott CR, Foote A, Constantino-Casas F, Smith S, Dobson JM, Murchison EP, Wu H, Yeh I, Fullen DR, Joseph N, Bastian BC, Patel RM, Martincorena I, Robles-Espinoza CD, Iyer V, Kuijjer ML, Arends MJ, Brenn T, Harms PW, Wood GA, Adams DJ. PMID: 30664638; PMCID: PMC6341101.
      View in: PubMed   Mentions: 55     Fields:    Translation:HumansAnimals
    30. The genetic landscape of anaplastic pleomorphic xanthoastrocytoma. Brain Pathol. 2019 01; 29(1):85-96. Phillips JJ, Gong H, Chen K, Joseph NM, van Ziffle J, Bastian BC, Grenert JP, Kline CN, Mueller S, Banerjee A, Nicolaides T, Gupta N, Berger MS, Lee HS, Pekmezci M, Tihan T, Bollen AW, Perry A, Shieh JTC, Solomon DA. PMID: 30051528; PMCID: PMC7837273.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansCells
    31. Human tumor genomics and zebrafish modeling identify SPRED1 loss as a driver of mucosal melanoma. Science. 2018 11 30; 362(6418):1055-1060. Ablain J, Xu M, Rothschild H, Jordan RC, Mito JK, Daniels BH, Bell CF, Joseph NM, Wu H, Bastian BC, Zon LI, Yeh I. PMID: 30385465; PMCID: PMC6475924.
      View in: PubMed   Mentions: 69     Fields:    Translation:HumansAnimalsCells
    32. Identification of high-risk human papillomavirus and Rb/E2F pathway genomic alterations in mutually exclusive subsets of colorectal neuroendocrine carcinoma. Mod Pathol. 2019 02; 32(2):290-305. Shamir ER, Devine WP, Pekmezci M, Umetsu SE, Krings G, Federman S, Cho SJ, Saunders TA, Jen KY, Bergsland E, Jones K, Kim GE, Kakar S, Chiu CY, Joseph NM. PMID: 30237525.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    33. Frequent GNAQ and GNA14 Mutations in Hepatic Small Vessel Neoplasm. Am J Surg Pathol. 2018 09; 42(9):1201-1207. Joseph NM, Brunt EM, Marginean C, Nalbantoglu I, Snover DC, Thung SN, Yeh MM, Umetsu SE, Ferrell LD, Gill RM. PMID: 29975248.
      View in: PubMed   Mentions: 33     Fields:    Translation:Humans
    34. An Ovarian Adenocarcinoma With Combined Low-grade Serous and Mesonephric Morphologies Suggests a Müllerian Origin for Some Mesonephric Carcinomas. Int J Gynecol Pathol. 2018 Sep; 37(5):448-459. Chapel DB, Joseph NM, Krausz T, Lastra RR. PMID: 28863071.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    35. Genomic and Transcriptomic Analysis Reveals Incremental Disruption of Key Signaling Pathways during Melanoma Evolution. Cancer Cell. 2018 07 09; 34(1):45-55.e4. Shain AH, Joseph NM, Yu R, Benhamida J, Liu S, Prow T, Ruben B, North J, Pincus L, Yeh I, Judson R, Bastian BC. PMID: 29990500; PMCID: PMC6319271.
      View in: PubMed   Mentions: 79     Fields:    Translation:HumansCells
    36. Bi-allelic Loss of CDKN2A Initiates Melanoma Invasion via BRN2 Activation. Cancer Cell. 2018 07 09; 34(1):56-68.e9. Zeng H, Jorapur A, Shain AH, Lang UE, Torres R, Zhang Y, McNeal AS, Botton T, Lin J, Donne M, Bastian IN, Yu R, North JP, Pincus L, Ruben BS, Joseph NM, Yeh I, Bastian BC, Judson RL. PMID: 29990501; PMCID: PMC6084788.
      View in: PubMed   Mentions: 49     Fields:    Translation:HumansAnimalsCells
    37. Abstract NG07: Genomic and transcriptomic analysis reveals incremental disruption of key signaling pathways during melanoma evolution. Bioinformatics and Systems Biology. 2018 Jul 1; ng07-ng07. Shain SA, Joseph JN, Yu YR, Benhamida BJ, Liu LS, Prow PT, Ruben RB, North NJ, Pincus PL, Yeh YI, Judson JR, Bastian BB. .
      View in: Publisher Site   Mentions:
    38. Abstract 5518: Bi-allelic loss of CDKN2A initiates melanoma invasion and metastasis via E2F1-BRN2 axis. Molecular and Cellular Biology / Genetics. 2018 Jul 1; 5518-5518. Zeng ZH, Jorapur JA, Shain SA, Lang LU, Torres TR, Zhang ZY, Botton BT, Lin LJ, Mcneal MA, Donne DM, Bastian BI, North NJ, Pincus PL, Yu YR, Ruben RB, Joseph JN, Ye YI, Bastian BB, Judson JR. .
      View in: Publisher Site   Mentions:
    39. Recurrent GNA14 mutations in anastomosing haemangiomas. Histopathology. 2018 08; 73(2):354-357. Bean GR, Joseph NM, Folpe AL, Horvai AE, Umetsu SE. PMID: 29574926.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    40. 1220 MicroRNA signature distinguishing nevi from primary melanoma. Journal of Investigative Dermatology. 2018 May 1; 138(5):s207. Torres TR, Lang LU, Shelton SS, Yeniay YY, Joseph JN, Shain SA, Yeh YI, Oldham OM, Wei WM, Bastian BB, Judson JR. .
      View in: Publisher Site   Mentions:
    41. Hepatic angiomyolipoma: mutation analysis and immunohistochemical pitfalls in diagnosis. Histopathology. 2018 Jul; 73(1):101-108. Yan Z, Grenert JP, Joseph NM, Ren C, Chen X, Shafizadeh N, Kakar S. PMID: 29512829; PMCID: PMC6472908.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    42. Genomic profile of appendiceal goblet cell carcinoid is distinct compared to appendiceal neuroendocrine tumor and conventional adenocarcinoma. Hum Pathol. 2018 07; 77:166-174. Wen KW, Grenert JP, Joseph NM, Shafizadeh N, Huang A, Hosseini M, Kakar S. PMID: 29634977.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    43. DNA Genotyping of Nonmolar Donor Egg Pregnancies With Abnormal Villous Morphology: Allele Zygosity Patterns Prevent Misinterpretation as Complete Hydatidiform Mole. Int J Gynecol Pathol. 2018 Mar; 37(2):191-197. Joseph NM, Pineda C, Rabban JT. PMID: 28463912.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    44. A recurrent kinase domain mutation in PRKCA defines chordoid glioma of the third ventricle. Nat Commun. 2018 02 23; 9(1):810. Goode B, Mondal G, Hyun M, Ruiz DG, Lin YH, Van Ziffle J, Joseph NM, Onodera C, Talevich E, Grenert JP, Hewedi IH, Snuderl M, Brat DJ, Kleinschmidt-DeMasters BK, Rodriguez FJ, Louis DN, Yong WH, Lopes MB, Rosenblum MK, Butowski N, Tihan T, Bollen AW, Phillips JJ, Wiita AP, Yeh I, Jacobson MP, Bastian BC, Perry A, Solomon DA. PMID: 29476136; PMCID: PMC5824822.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    45. Adenomatoid tumors of the male and female genital tract are defined by TRAF7 mutations that drive aberrant NF-kB pathway activation. Mod Pathol. 2018 04; 31(4):660-673. Goode B, Joseph NM, Stevers M, Van Ziffle J, Onodera C, Talevich E, Grenert JP, Yeh I, Bastian BC, Phillips JJ, Garg K, Rabban JT, Zaloudek C, Solomon DA. PMID: 29148537; PMCID: PMC5906165.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    46. FOXL2 Mutation Status in Granulosa Theca Cell Tumors of the Ovary. Int J Gynecol Pathol. 2017 Nov; 36(6):568-574. Nolan A, Joseph NM, Sangoi AR, Rabban J, Zaloudek C, Garg K. PMID: 28319575.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    47. Genomic Analysis of Pigmented Epithelioid Melanocytomas Reveals Recurrent Alterations in PRKAR1A, and PRKCA Genes. Am J Surg Pathol. 2017 Oct; 41(10):1333-1346. Cohen JN, Joseph NM, North JP, Onodera C, Zembowicz A, LeBoit PE. PMID: 28796000.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    48. Genomic profiling of breast secretory carcinomas reveals distinct genetics from other breast cancers and similarity to mammary analog secretory carcinomas. Mod Pathol. 2017 08; 30(8):1086-1099. Krings G, Joseph NM, Bean GR, Solomon D, Onodera C, Talevich E, Yeh I, Grenert JP, Hosfield E, Crawford ED, Jordan RC, van Zante A, Zaloudek C, Shin SJ, Chen YY. PMID: 28548128.
      View in: PubMed   Mentions: 26     Fields:    Translation:Humans
    49. Targeted next-generation DNA sequencing of paired tumor and normal DNA to reveal frequent actionable germline alterations. Journal of Clinical Oncology. 2017 May 20; 35(15_suppl):11575-11575. Korn KW, Yey YI, Van Ziffle VJ, Grenert GJ, Joseph JN, Solomon SD, Laurance LM, Talevich TE, Onodera OC, Krings KG, Stohr SB, Blanco BA, Bastian BB. .
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    50. Targeted next-generation sequencing of pediatric neuro-oncology patients improves diagnosis, identifies pathogenic germline mutations, and directs targeted therapy. Neuro Oncol. 2017 05 01; 19(5):699-709. Kline CN, Joseph NM, Grenert JP, van Ziffle J, Talevich E, Onodera C, Aboian M, Cha S, Raleigh DR, Braunstein S, Torkildson J, Samuel D, Bloomer M, Campomanes AGA, Banerjee A, Butowski N, Raffel C, Tihan T, Bollen AW, Phillips JJ, Korn WM, Yeh I, Bastian BC, Gupta N, Mueller S, Perry A, Nicolaides T, Solomon DA. PMID: 28453743; PMCID: PMC5464451.
      View in: PubMed   Mentions: 135     Fields:    Translation:Humans
    51. Recurrent GNAQ mutations in anastomosing hemangiomas. Mod Pathol. 2017 05; 30(5):722-727. Bean GR, Joseph NM, Gill RM, Folpe AL, Horvai AE, Umetsu SE. PMID: 28084343.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
    52. Genomic profiling of malignant peritoneal mesothelioma reveals recurrent alterations in epigenetic regulatory genes BAP1, SETD2, and DDX3X. Mod Pathol. 2017 02; 30(2):246-254. Joseph NM, Chen YY, Nasr A, Yeh I, Talevich E, Onodera C, Bastian BC, Rabban JT, Garg K, Zaloudek C, Solomon DA. PMID: 27813512; PMCID: PMC5288276.
      View in: PubMed   Mentions: 43     Fields:    Translation:Humans
    53. Activating NRF1-BRAF and ATG7-RAF1 fusions in anaplastic pleomorphic xanthoastrocytoma without BRAF p.V600E mutation. Acta Neuropathol. 2016 11; 132(5):757-760. Phillips JJ, Gong H, Chen K, Joseph NM, van Ziffle J, Jin LW, Bastian BC, Bollen AW, Perry A, Nicolaides T, Solomon DA, Shieh JT. PMID: 27624885; PMCID: PMC5074852.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    54. Abstract 2372: The genetic evolution of melanoma. Tumor Biology. 2016 Jul 15; 2372-2372. Shain SA, Yu YR, Yeh YI, Benhamida BJ, Kovalyshyn KI, Sriharan SA, Talevich TE, Dummer DR, North NJ, Pincus PL, Ruben RB, Rickaby RW, D’Arrigo DC, Robson RA, Judson JR, Joseph JN, Bastian BB. .
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    55. Immunohistochemistry for 2-Succinocysteine (2SC) and Fumarate Hydratase (FH) in Cutaneous Leiomyomas May Aid in Identification of Patients With HLRCC (Hereditary Leiomyomatosis and Renal Cell Carcinoma Syndrome). Am J Surg Pathol. 2016 07; 40(7):982-8. Buelow B, Cohen J, Nagymanyoki Z, Frizzell N, Joseph NM, McCalmont T, Garg K. PMID: 26945337.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    56. Genomic profiling of malignant phyllodes tumors reveals aberrations in FGFR1 and PI-3 kinase/RAS signaling pathways and provides insights into intratumoral heterogeneity. Mod Pathol. 2016 09; 29(9):1012-27. Liu SY, Joseph NM, Ravindranathan A, Stohr BA, Greenland NY, Vohra P, Hosfield E, Yeh I, Talevich E, Onodera C, Van Ziffle JA, Grenert JP, Bastian BC, Chen YY, Krings G. PMID: 27255162.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansCells
    57. TB-02UPFRONT, REAL-TIME TUMOR AND GERMLINE SEQUENCING OF PEDIATRIC BRAIN TUMOR PATIENTS: THE UCSF EXPERIENCE. Neuro-Oncology. 2016 Jun 1; 18(suppl 3):iii169.2-iii169. Kline KC, Solomon SD, Perry PA, Bastian BB, Joseph JN, Phillips PJ, Tihan TT, Yeh YI, Van Ziffle VJ, Grenert GJ, Bollen BA, Mueller MS, Banerjee BA, Gupta GN, Raffel RC, Braunstein BS, Cha CS, Aboian AM, Samuel SD, Torkildson TJ, Campomanes CA, Nicolaides NT. .
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    58. Next-generation sequencing (NGS) in an advanced hepatocellular carcinoma (HCC) cohort: Analysis of common mutations, clinical covariates, and overall survival (OS). Journal of Clinical Oncology. 2016 May 20; 34(15_suppl):e15641-e15641. Kelley KR, Bracci BP, Gordan GJ, Evason EK, Joseph JN, Bocobo BA, Rosenthal RB, Stoppler SH, Nimeiri NH, Venook VA. .
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    59. IDH1 mutation can be present in diffuse astrocytomas and giant cell glioblastomas of young children under 10 years of age. Acta Neuropathol. 2016 07; 132(1):153-5. Ferris SP, Goode B, Joseph NM, Kline CN, Samuel D, Gupta N, Bollen A, Perry A, Mueller S, Solomon DA. PMID: 27161253; PMCID: PMC4915961.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    60. Hepatic small vessel neoplasm, a rare infiltrative vascular neoplasm of uncertain malignant potential. Hum Pathol. 2016 08; 54:143-51. Gill RM, Buelow B, Mather C, Joseph NM, Alves V, Brunt EM, Liu TC, Makhlouf H, Marginean C, Nalbantoglu I, Sempoux C, Snover DC, Thung SN, Yeh MM, Ferrell LD. PMID: 27090685; PMCID: PMC5242228.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    61. Gliosarcomas lack BRAFV600E mutation, but a subset exhibit β-catenin nuclear localization. Neuropathology. 2016 Oct; 36(5):448-455. Schwetye KE, Joseph NM, Al-Kateb H, Rich KM, Schmidt RE, Perry A, Gutmann DH, Dahiya S. PMID: 26932501.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    62. Inactivating MUTYH germline mutations in pediatric patients with high-grade midline gliomas. Neuro Oncol. 2016 05; 18(5):752-3. Kline CN, Joseph NM, Grenert JP, van Ziffle J, Yeh I, Bastian BC, Mueller S, Solomon DA. PMID: 26902849; PMCID: PMC4827050.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    63. Next-generation sequencing (NGS) in an advanced hepatocellular carcinoma (HCC) cohort: Analyses of TP53 and CTNNB1. Journal of Clinical Oncology. 2016 Feb 1; 34(4_suppl):286-286. Kelley KR, Gordan GJ, Evason EK, Bracci BP, Joseph JN, Bocobo BA, Rosenthal RB, Nimeiri NH, Venook VA. .
      View in: Publisher Site   Mentions:
    64. Applications of STR Genotyping in Surgical Pathology. AJSP Review and Reports. 2016 Jan 1; 21(2):103-106. Halfacre HA, Van Ziffle VJ, Grenert GJ, Joseph JN. .
      View in: Publisher Site   Mentions:
    65. Morphology and Immunohistochemistry for 2SC and FH Aid in Detection of Fumarate Hydratase Gene Aberrations in Uterine Leiomyomas From Young Patients. Am J Surg Pathol. 2015 Nov; 39(11):1529-39. Joseph NM, Solomon DA, Frizzell N, Rabban JT, Zaloudek C, Garg K. PMID: 26457356.
      View in: PubMed   Mentions: 30     Fields:    Translation:Humans
    66. A Multicenter, Open-Label Phase II Clinical Trial of Combined MEK plus EGFR Inhibition for Chemotherapy-Refractory Advanced Pancreatic Adenocarcinoma. Clin Cancer Res. 2016 Jan 01; 22(1):61-8. Ko AH, Bekaii-Saab T, Van Ziffle J, Mirzoeva OM, Joseph NM, Talasaz A, Kuhn P, Tempero MA, Collisson EA, Kelley RK, Venook AP, Dito E, Ong A, Ziyeh S, Courtin R, Linetskaya R, Tahiri S, Korn WM. PMID: 26251290; PMCID: PMC4703532.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansCellsCTClinical Trials
    67. Apparent diffusion coefficient in glioblastoma with PNET-like components, a GBM variant. J Neurooncol. 2014 Sep; 119(2):353-60. Ali S, Joseph NM, Perry A, Barajas RF, Cha S. PMID: 24893732.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    68. Rules of engagement: predictors of Black Caribbean immigrants' engagement with African American culture. Cultur Divers Ethnic Minor Psychol. 2013 Oct; 19(4):414-23. Joseph N, Watson NN, Wang Z, Case AD, Hunter CD. PMID: 23914747.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    69. Diagnostic utility and limitations of glutamine synthetase and serum amyloid-associated protein immunohistochemistry in the distinction of focal nodular hyperplasia and inflammatory hepatocellular adenoma. Mod Pathol. 2014 Jan; 27(1):62-72. Joseph NM, Ferrell LD, Jain D, Torbenson MS, Wu TT, Yeh MM, Kakar S. PMID: 23807780.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    70. Diagnostic implications of IDH1-R132H and OLIG2 expression patterns in rare and challenging glioblastoma variants. Mod Pathol. 2013 Mar; 26(3):315-26. Joseph NM, Phillips J, Dahiya S, M Felicella M, Tihan T, Brat DJ, Perry A. PMID: 23041832.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    71. Enteric glia are multipotent in culture but primarily form glia in the adult rodent gut. J Clin Invest. 2011 Sep; 121(9):3398-411. Joseph NM, He S, Quintana E, Kim YG, Núñez G, Morrison SJ. PMID: 21865643; PMCID: PMC3163971.
      View in: PubMed   Mentions: 128     Fields:    Translation:HumansAnimalsCells
    72. mTOR activation induces tumor suppressors that inhibit leukemogenesis and deplete hematopoietic stem cells after Pten deletion. Cell Stem Cell. 2010 Nov 05; 7(5):593-605. Lee JY, Nakada D, Yilmaz OH, Tothova Z, Joseph NM, Lim MS, Gilliland DG, Morrison SJ. PMID: 21040901; PMCID: PMC2995996.
      View in: PubMed   Mentions: 116     Fields:    Translation:AnimalsCells
    73. The loss of Nf1 transiently promotes self-renewal but not tumorigenesis by neural crest stem cells. Cancer Cell. 2008 Feb; 13(2):129-40. Joseph NM, Mosher JT, Buchstaller J, Snider P, McKeever PE, Lim M, Conway SJ, Parada LF, Zhu Y, Morrison SJ. PMID: 18242513; PMCID: PMC2566828.
      View in: PubMed   Mentions: 79     Fields:    Translation:AnimalsCells
    74. Intrinsic differences among spatially distinct neural crest stem cells in terms of migratory properties, fate determination, and ability to colonize the enteric nervous system. Dev Biol. 2007 Mar 01; 303(1):1-15. Mosher JT, Yeager KJ, Kruger GM, Joseph NM, Hutchin ME, Dlugosz AA, Morrison SJ. PMID: 17113577; PMCID: PMC1910607.
      View in: PubMed   Mentions: 27     Fields:    Translation:AnimalsCells
    75. Increasing p16INK4a expression decreases forebrain progenitors and neurogenesis during ageing. Nature. 2006 Sep 28; 443(7110):448-52. Molofsky AV, Slutsky SG, Joseph NM, He S, Pardal R, Krishnamurthy J, Sharpless NE, Morrison SJ. PMID: 16957738; PMCID: PMC2586960.
      View in: PubMed   Mentions: 478     Fields:    Translation:AnimalsCells
    76. Toward an understanding of the physiological function of Mammalian stem cells. Dev Cell. 2005 Aug; 9(2):173-83. Joseph NM, Morrison SJ. PMID: 16054025.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansAnimalsCells
    77. Neural crest stem cells undergo multilineage differentiation in developing peripheral nerves to generate endoneurial fibroblasts in addition to Schwann cells. Development. 2004 Nov; 131(22):5599-612. Joseph NM, Mukouyama YS, Mosher JT, Jaegle M, Crone SA, Dormand EL, Lee KF, Meijer D, Anderson DJ, Morrison SJ. PMID: 15496445; PMCID: PMC2638001.
      View in: PubMed   Mentions: 123     Fields:    Translation:AnimalsCells
    78. Modulation of cell proliferation in the embryonic retina of zebrafish (Danio rerio). Dev Dyn. 2000 Nov; 219(3):391-401. Li Z, Hu M, Ochocinska MJ, Joseph NM, Easter SS. PMID: 11066095.
      View in: PubMed   Mentions: 32     Fields:    Translation:Animals
    79. The morphogenesis of the zebrafish eye, including a fate map of the optic vesicle. Dev Dyn. 2000 May; 218(1):175-88. Li Z, Joseph NM, Easter SS. PMID: 10822269.
      View in: PubMed   Mentions: 43     Fields:    Translation:Animals
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