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Kirk Jones, MD

Title(s)Professor, Pathology
SchoolSchool of Medicine
Address505 Parnassus Avenue
San Francisco CA 94117
Phone415-353-1613
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    Collapse Biography 
    Collapse Education and Training
    University of California, San Francisco Residency School of Medicine
    University of California, San FranciscoM.D.1994School of Medicine

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Chronic Lung Allograft Dysfunction Small Airways Reveal A Lymphocytic Inflammation Gene Signature. Am J Transplant. 2020 Sep 03. Dugger DT, Fung M, Hays SR, Singer JP, Ellen Kleinhenz M, Leard LE, Golden JA, Shah RJ, Lee JS, Deiter F, Greenland NY, Jones KD, Langelier CR, Greenland JR. PMID: 32885581.
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    2. Telomere length in patients with unclassifiable interstitial lung disease: a cohort study. Eur Respir J. 2020 Aug; 56(2). Ley B, Liu S, Elicker BM, Henry TS, Vittinghoff E, Golden JA, Jones KD, Wolters PJ. PMID: 32341108.
      View in: PubMed   Mentions:    Fields:    
    3. Dose-Dependent Pulmonary Toxicity of Aerosolized Vitamin E Acetate. Am J Respir Cell Mol Biol. 2020 Aug 21. Matsumoto S, Fang X, Traber MG, Jones KD, Langelier C, Hayakawa Serpa P, Calfee CS, Matthay MA, Gotts JE. PMID: 32822237.
      View in: PubMed   Mentions:    Fields:    
    4. Histopathologic Assessment of Suspected Idiopathic Pulmonary Fibrosis: Where We Are and Where We Need to Go. Arch Pathol Lab Med. 2020 Jul 02. Smith ML, Hariri LP, Mino-Kenudson M, Dacic S, Attanoos R, Borczuk A, Colby TV, Cooper W, Jones KD, Leslie KO, Mahar A, Larsen BT, Cavazza A, Fukuoka J, Roden AC, Sholl LM, Tazelaar HD, Churg A, Beasley MB. PMID: 32614648.
      View in: PubMed   Mentions:    Fields:    
    5. Airway Epithelial Telomere Dysfunction Drives Remodeling Similar to Chronic Lung Allograft Dysfunction. Am J Respir Cell Mol Biol. 2020 Jun 18. Naikawadi RP, Green G, Jones KD, Achtar-Zadeh N, Mieleszko JE, Arnould I, Kukreja J, Greenland J, Wolters PJ. PMID: 32551854.
      View in: PubMed   Mentions:    Fields:    
    6. E-Cigarette or Vaping Product Use-Associated Lung Injury: A Review for Pathologists. Arch Pathol Lab Med. 2020 May 13. Cecchini MJ, Mukhopadhyay S, Arrossi AV, Beasley MB, Butt YM, Jones KD, Pambuccian S, Mehrad M, Monaco SE, Saqi A, Smith ML, Tazelaar HD, Larsen BT. PMID: 32401055.
      View in: PubMed   Mentions:    Fields:    
    7. A Defect in Thymic Tolerance Causes T Cell-Mediated Autoimmunity in a Murine Model of COPA Syndrome. J Immunol. 2020 May 01; 204(9):2360-2373. Deng Z, Law CS, Ho FO, Wang KM, Jones KD, Shin JS, Shum AK. PMID: 32198142.
      View in: PubMed   Mentions:    Fields:    
    8. Demystifying morphomolecular alterations of vasculature in interstitial lung diseases. Eur Respir J. 2020 Mar; 55(3). Yanagihara T, Jones KD. PMID: 32165424.
      View in: PubMed   Mentions: 1     Fields:    
    9. Reversal of TGFß1-Driven Profibrotic State in Patients with Pulmonary Fibrosis. N Engl J Med. 2020 03 12; 382(11):1068-1070. Chapman HA, Wei Y, Montas G, Leong D, Golden JA, Trinh BN, Wolters PJ, Le Saux CJ, Jones KD, Hills NK, Foster E, Oldham JM, Linderholm AL, Kotak P, Decaris M, Turner S, Song JW. PMID: 32160670.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    10. Pulmonary Cystic Disease and Its Mimics. Surg Pathol Clin. 2020 Mar; 13(1):141-163. Jones KD. PMID: 32005429.
      View in: PubMed   Mentions:    Fields:    
    11. Pulmonary Pathology: Providing Practical Answers for Busy Pathologists. Surg Pathol Clin. 2020 03; 13(1):ix-x. Jones KD. PMID: 32005438.
      View in: PubMed   Mentions:    Fields:    
    12. Giant cell interstitial pneumonia secondary to cobalt exposure from e-cigarette use. Eur Respir J. 2019 12; 54(6). Fels Elliott DR, Shah R, Hess CA, Elicker B, Henry TS, Rule AM, Chen R, Golozar M, Jones KD. PMID: 31801823.
      View in: PubMed   Mentions: 3     Fields:    
    13. Diagnosis of Mesothelioma. Surg Pathol Clin. 2020 Mar; 13(1):73-89. Fels Elliott DR, Jones KD. PMID: 32005436.
      View in: PubMed   Mentions:    Fields:    
    14. Small Airway Disease: A Step Closer to Etiology-Based Classification of Bronchiolitis. Surg Pathol Clin. 2020 Mar; 13(1):189-196. Urisman A, Jones KD. PMID: 32005432.
      View in: PubMed   Mentions:    Fields:    
    15. Rare Protein-Altering Telomere-related Gene Variants in Patients with Chronic Hypersensitivity Pneumonitis. Am J Respir Crit Care Med. 2019 11 01; 200(9):1154-1163. Ley B, Torgerson DG, Oldham JM, Adegunsoye A, Liu S, Li J, Elicker BM, Henry TS, Golden JA, Jones KD, Dressen A, Yaspan BL, Arron JR, Noth I, Hoffmann TJ, Wolters PJ. PMID: 31268371.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    16. Severe Silicosis in Engineered Stone Fabrication Workers - California, Colorado, Texas, and Washington, 2017-2019. MMWR Morb Mortal Wkly Rep. 2019 Sep 27; 68(38):813-818. Rose C, Heinzerling A, Patel K, Sack C, Wolff J, Zell-Baran L, Weissman D, Hall E, Sooriash R, McCarthy RB, Bojes H, Korotzer B, Flattery J, Weinberg JL, Potocko J, Jones KD, Reeb-Whitaker CK, Reul NK, LaSee CR, Materna BL, Raghu G, Harrison R. PMID: 31557149.
      View in: PubMed   Mentions:    Fields:    Translation:HumansPHPublic Health
    17. Case report: recurrent metastatic breast cancer in internal mammary dissection bed discovered at the time of coronary bypass. J Cardiothorac Surg. 2019 Sep 05; 14(1):158. Woodard GA, Lee H, Fels Elliott DR, Jones KD, Wong J, Jablons DM, Ihnken K. PMID: 31488186.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    18. Respiratory Health after Military Service in Southwest Asia and Afghanistan. An Official American Thoracic Society Workshop Report. Ann Am Thorac Soc. 2019 08; 16(8):e1-e16. Garshick E, Abraham JH, Baird CP, Ciminera P, Downey GP, Falvo MJ, Hart JE, Jackson DA, Jerrett M, Kuschner W, Helmer DA, Jones KD, Krefft SD, Mallon T, Miller RF, Morris MJ, Proctor SP, Redlich CA, Rose CS, Rull RP, Saers J, Schneiderman AI, Smith NL, Yiallouros P, Blanc PD. PMID: 31368802.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    19. Prevalence and Clinical Significance of Antineutrophil Cytoplasmic Antibodies in North American Patients With Idiopathic Pulmonary Fibrosis. Chest. 2019 10; 156(4):715-723. Liu GY, Ventura IB, Achtar-Zadeh N, Elicker BM, Jones KD, Wolters PJ, Collard HR, Adegunsoye A, Strek ME, Ley B. PMID: 31181198.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    20. Pulmonary physiology is poorly associated with radiological extent of disease in systemic sclerosis-associated interstitial lung disease. Eur Respir J. 2019 05; 53(5). Jhajj A, Gill HP, Hague CJ, Murphy D, Elicker B, Soon J, Sulaiman N, Castillo-Saldana D, Wilcox PG, Dunne J, Lee JS, Wolters PJ, Ley B, Jones KD, Morisset J, Ryerson CJ. PMID: 30846470.
      View in: PubMed   Mentions:    Fields:    
    21. Significance of bronchiolocentric fibrosis in patients with histopathological usual interstitial pneumonia. Histopathology. 2019 Jun; 74(7):1088-1097. Tanizawa K, Ley B, Vittinghoff E, Elicker BM, Henry TS, Wolters PJ, Brownell R, Liu S, Collard HR, Jones KD. PMID: 30742318.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    22. Incorporation of a Molecular Prognostic Classifier Improves Conventional Non-Small Cell Lung Cancer Staging. J Thorac Oncol. 2019 07; 14(7):1223-1232. Kratz JR, Haro GJ, Cook NR, He J, Van Den Eeden SK, Woodard GA, Gubens MA, Jahan TM, Jones KD, Kim IJ, He B, Jablons DM, Mann MJ. PMID: 30959120.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    23. Proceedings of the American College of Rheumatology/Association of Physicians of Great Britain and Ireland Connective Tissue Disease-Associated Interstitial Lung Disease Summit: A Multidisciplinary Approach to Address Challenges and Opportunities. QJM. 2019 02 01; 112(2):81-93. Fischer A, Strek ME, Cottin V, Dellaripa PF, Bernstein EJ, Brown KK, Danoff SK, Distler O, Hirani N, Jones KD, Khanna D, Lee JS, Lynch DA, Maher TM, Millar AB, Raghu G, Silver RM, Steen VD, Volkmann ER, Mullan RH, O'Dwyer DN, Donnelly SC. PMID: 30605544.
      View in: PubMed   Mentions: 1     Fields:    
    24. Proceedings of the American College of Rheumatology/Association of Physicians of Great Britain and Ireland Connective Tissue Disease-Associated Interstitial Lung Disease Summit: A Multidisciplinary Approach to Address Challenges and Opportunities. Arthritis Rheumatol. 2019 02; 71(2):182-195. Fischer A, Strek ME, Cottin V, Dellaripa PF, Bernstein EJ, Brown KK, Danoff SK, Distler O, Hirani N, Jones KD, Khanna D, Lee JS, Lynch DA, Maher TM, Millar AB, Raghu G, Silver RM, Steen VD, Volkmann ER, Mullan RH, O'Dwyer DN, Donnelly SC. PMID: 30604506.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    25. Smoking-Related Lung Disease. Semin Ultrasound CT MR. 2019 Jun; 40(3):229-238. Elicker BM, Kallianos KG, Jones KD, Henry TS. PMID: 31200871.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    26. Histopathological and molecular analysis of idiopathic pulmonary fibrosis lungs from patients treated with pirfenidone or nintedanib. Histopathology. 2019 Jan; 74(2):341-349. Zhang Y, Jones KD, Achtar-Zadeh N, Green G, Kukreja J, Xu B, Wolters PJ. PMID: 30152895.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    27. Pirfenidone-Induced Sarcoid-Like Reaction: A Novel Complication. Chest. 2018 10; 154(4):e89-e92. Kolaitis NA, Kukreja J, Jones KD, Hays SR, Leard LE. PMID: 30290953.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    28. Pulmonary loose tumor tissue fragments and spread through air spaces (STAS): Invasive pattern or artifact? A critical review. Lung Cancer. 2018 09; 123:107-111. Blaauwgeers H, Russell PA, Jones KD, Radonic T, Thunnissen E. PMID: 30089579.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimals
    29. Analysis of pulmonary features and treatment approaches in the COPA syndrome. ERJ Open Res. 2018 Apr; 4(2). Tsui JL, Estrada OA, Deng Z, Wang KM, Law CS, Elicker BM, Jones KD, Dell SD, Gudmundsson G, Hansdottir S, Helfgott SM, Volpi S, Gattorno M, Waterfield MR, Chan AY, Chung SA, Ley B, Shum AK. PMID: 29977900.
      View in: PubMed   Mentions:
    30. Unclassifiable interstitial lung disease: a pathologist's perspective. Eur Respir Rev. 2018 Mar 31; 27(147). Jones KD. PMID: 29491037.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    31. Identification of Diagnostic Criteria for Chronic Hypersensitivity Pneumonitis: An International Modified Delphi Survey. Am J Respir Crit Care Med. 2018 04 15; 197(8):1036-1044. Morisset J, Johannson KA, Jones KD, Wolters PJ, Collard HR, Walsh SLF, Ley B. PMID: 29172641.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    32. The MUC5B promoter polymorphism and telomere length in patients with chronic hypersensitivity pneumonitis: an observational cohort-control study. Lancet Respir Med. 2017 08; 5(8):639-647. Ley B, Newton CA, Arnould I, Elicker BM, Henry TS, Vittinghoff E, Golden JA, Jones KD, Batra K, Torrealba J, Garcia CK, Wolters PJ. PMID: 28648751.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    33. Mortality Risk Prediction in Scleroderma-Related Interstitial Lung Disease: The SADL Model. Chest. 2017 11; 152(5):999-1007. Morisset J, Vittinghoff E, Elicker BM, Hu X, Le S, Ryu JH, Jones KD, Haemel A, Golden JA, Boin F, Ley B, Wolters PJ, King TE, Collard HR, Lee JS. PMID: 28629914.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    34. Adjuvant Chemotherapy Guided by Molecular Profiling and Improved Outcomes in Early Stage, Non-Small-Cell Lung Cancer. Clin Lung Cancer. 2018 01; 19(1):58-64. Woodard GA, Wang SX, Kratz JR, Zoon-Besselink CT, Chiang CY, Gubens MA, Jahan TM, Blakely CM, Jones KD, Mann MJ, Jablons DM. PMID: 28645632.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    35. The performance of the GAP model in patients with rheumatoid arthritis associated interstitial lung disease. Respir Med. 2017 06; 127:51-56. Morisset J, Vittinghoff E, Lee BY, Tonelli R, Hu X, Elicker BM, Ryu JH, Jones KD, Cerri S, Manfredi A, Sebastiani M, Gross AJ, Ley B, Wolters PJ, King TE, Kim DS, Collard HR, Lee JS. PMID: 28502419.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    36. Understanding the determinants of health-related quality of life in rheumatoid arthritis-associated interstitial lung disease. Respir Med. 2017 06; 127:1-6. Natalini JG, Swigris JJ, Morisset J, Elicker BM, Jones KD, Fischer A, Collard HR, Lee JS. PMID: 28502413.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    37. Pathologic Findings and Prognosis in a Large Prospective Cohort of Chronic Hypersensitivity Pneumonitis. Chest. 2017 09; 152(3):502-509. Wang P, Jones KD, Urisman A, Elicker BM, Urbania T, Johannson KA, Assayag D, Lee J, Wolters PJ, Collard HR, Koth LL. PMID: 28223152.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    38. The use of pretest probability increases the value of high-resolution CT in diagnosing usual interstitial pneumonia. Thorax. 2017 May; 72(5):424-429. Brownell R, Moua T, Henry TS, Elicker BM, White D, Vittinghoff E, Jones KD, Urisman A, Aravena C, Johannson KA, Golden JA, King TE, Wolters PJ, Collard HR, Ley B. PMID: 28082530.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    39. Use of Mycophenolate Mofetil or Azathioprine for the Management of Chronic Hypersensitivity Pneumonitis. Chest. 2017 03; 151(3):619-625. Morisset J, Johannson KA, Vittinghoff E, Aravena C, Elicker BM, Jones KD, Fell CD, Manganas H, Dubé BP, Wolters PJ, Collard HR, Ryerson CJ, Ley B. PMID: 27816444.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    40. Persistent Pathology in Influenza-Infected Mouse Lungs. Am J Respir Cell Mol Biol. 2016 10; 55(4):613-615. Kanegai CM, Xi Y, Donne ML, Gotts JE, Driver IH, Amidzic G, Lechner AJ, Jones KD, Vaughan AE, Chapman HA, Rock JR. PMID: 27689795.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    41. miR-34 miRNAs Regulate Cellular Senescence in Type II Alveolar Epithelial Cells of Patients with Idiopathic Pulmonary Fibrosis. PLoS One. 2016; 11(6):e0158367. Disayabutr S, Kim EK, Cha SI, Green G, Naikawadi RP, Jones KD, Golden JA, Schroeder A, Matthay MA, Kukreja J, Erle DJ, Collard HR, Wolters PJ. PMID: 27362652.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    42. A diagnostic model for chronic hypersensitivity pneumonitis. Thorax. 2016 10; 71(10):951-4. Johannson KA, Elicker BM, Vittinghoff E, Assayag D, de Boer K, Golden JA, Jones KD, King TE, Koth LL, Lee JS, Ley B, Wolters PJ, Collard HR. PMID: 27245779.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    43. Nondiagnostic Computed Tomography-guided Percutaneous Lung Biopsies Are More Likely When Infection Is Suspected. J Thorac Imaging. 2016 May; 31(3):151-5. Haas BM, Elicker BM, Nguyen J, Ordovas KG, Jones KD, Henry TS, Naeger DM. PMID: 27043424.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    44. Idiopathic pulmonary fibrosis: securing a confident diagnosis for every patient. Eur Respir J. 2016 Apr; 47(4):1057-9. Jones MG, Walsh SL, Jones KD, Richeldi L. PMID: 27037316.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    45. Multidisciplinary Approach to Hypersensitivity Pneumonitis. J Thorac Imaging. 2016 Mar; 31(2):92-103. Elicker BM, Jones KD, Henry TS, Collard HR. PMID: 26479131.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    46. Lung Cancer Staging and Prognosis. Cancer Treat Res. 2016; 170:47-75. Woodard GA, Jones KD, Jablons DM. PMID: 27535389.
      View in: PubMed   Mentions: 45     Fields:    Translation:Humans
    47. Survival in interstitial pneumonia with features of autoimmune disease: a comparison of proposed criteria. Respir Med. 2015 Oct; 109(10):1326-31. Assayag D, Kim EJ, Elicker BM, Jones KD, Golden JA, King TE, Koth LL, Shum AK, Wolters PJ, Collard HR, Lee JS. PMID: 26303338.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    48. A Case of Hypercalcemia and Overexpression of CYP27B1 in Skeletal Muscle Lesions in a Patient with HIV Infection After Cosmetic Injections with Polymethylmethacrylate (PMMA) for Wasting. Calcif Tissue Int. 2015 Dec; 97(6):634-9. Hindi SM, Wang Y, Jones KD, Nussbaum JC, Chang Y, Masharani U, Bikle D, Shoback DM, Hsiao EC. PMID: 26253396.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    49. The effect of bronchodilators on forced vital capacity measurement in patients with idiopathic pulmonary fibrosis. Respir Med. 2015 Aug; 109(8):1058-62. Assayag D, Vittinghoff E, Ryerson CJ, Cocconcelli E, Tonelli R, Hu X, Elicker BM, Golden JA, Jones KD, King TE, Koth LL, Lee JS, Ley B, Shum AK, Wolters PJ, Ryu JH, Collard HR. PMID: 26140806.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    50. Lung transplantation for hypersensitivity pneumonitis. Chest. 2015 Jun; 147(6):1558-1565. Kern RM, Singer JP, Koth L, Mooney J, Golden J, Hays S, Greenland J, Wolters P, Ghio E, Jones KD, Leard L, Kukreja J, Blanc PD. PMID: 25412059.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    51. COPA mutations impair ER-Golgi transport and cause hereditary autoimmune-mediated lung disease and arthritis. Nat Genet. 2015 Jun; 47(6):654-60. Watkin LB, Jessen B, Wiszniewski W, Vece TJ, Jan M, Sha Y, Thamsen M, Santos-Cortez RL, Lee K, Gambin T, Forbes LR, Law CS, Stray-Pedersen A, Cheng MH, Mace EM, Anderson MS, Liu D, Tang LF, Nicholas SK, Nahmod K, Makedonas G, Canter DL, Kwok PY, Hicks J, Jones KD, Penney S, Jhangiani SN, Rosenblum MD, Dell SD, Waterfield MR, Papa FR, Muzny DM, Zaitlen N, Leal SM, Gonzaga-Jauregui C, Boerwinkle E, Eissa NT, Gibbs RA, Lupski JR, Orange JS, Shum AK. PMID: 25894502.
      View in: PubMed   Mentions: 57     Fields:    Translation:HumansCells
    52. Prognostic molecular assay might improve identification of patients at risk for recurrence in early-stage non-small-cell lung cancer. Clin Lung Cancer. 2014 Nov; 15(6):426-32. Woodard GA, Gubens MA, Jahan TM, Jones KD, Kukreja J, Theodore PR, Cardozo S, Jew G, Clary-Macy C, Jablons DM, Mann MJ. PMID: 25258195.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    53. Mast cells in a murine lung ischemia-reperfusion model of primary graft dysfunction. Respir Res. 2014 Aug 13; 15:95. Greenland JR, Xu X, Sayah DM, Liu FC, Jones KD, Looney MR, Caughey GH. PMID: 25115556.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    54. Effect of telomere length on survival in patients with idiopathic pulmonary fibrosis: an observational cohort study with independent validation. Lancet Respir Med. 2014 Jul; 2(7):557-65. Stuart BD, Lee JS, Kozlitina J, Noth I, Devine MS, Glazer CS, Torres F, Kaza V, Girod CE, Jones KD, Elicker BM, Ma SF, Vij R, Collard HR, Wolters PJ, Garcia CK. PMID: 24948432.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansCells
    55. Idiopathic pulmonary fibrosis: CT and risk of death. Radiology. 2014 Nov; 273(2):570-9. Ley B, Elicker BM, Hartman TE, Ryerson CJ, Vittinghoff E, Ryu JH, Lee JS, Jones KD, Richeldi L, King TE, Collard HR. PMID: 24927326.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    56. A comparison of health-related quality of life in idiopathic pulmonary fibrosis and chronic hypersensitivity pneumonitis. Chest. 2014 Jun; 145(6):1333-1338. Lubin M, Chen H, Elicker B, Jones KD, Collard HR, Lee JS. PMID: 24458311.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    57. Predicting survival across chronic interstitial lung disease: the ILD-GAP model. Chest. 2014 Apr; 145(4):723-728. Ryerson CJ, Vittinghoff E, Ley B, Lee JS, Mooney JJ, Jones KD, Elicker BM, Wolters PJ, Koth LL, King TE, Collard HR. PMID: 24114524.
      View in: PubMed   Mentions: 53     Fields:    Translation:Humans
    58. Pulmonary pathology in connective tissue disease. Semin Respir Crit Care Med. 2014 Apr; 35(2):201-12. Urisman A, Jones KD. PMID: 24668535.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    59. Pulmonary interstitial emphysema in adults: a clinicopathologic study of 53 lung explants. Am J Surg Pathol. 2014 Mar; 38(3):339-45. Barcia SM, Kukreja J, Jones KD. PMID: 24525504.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    60. MicroRNA-494 within an oncogenic microRNA megacluster regulates G1/S transition in liver tumorigenesis through suppression of mutated in colorectal cancer. Hepatology. 2014 Jan; 59(1):202-15. Lim L, Balakrishnan A, Huskey N, Jones KD, Jodari M, Ng R, Song G, Riordan J, Anderton B, Cheung ST, Willenbring H, Dupuy A, Chen X, Brown D, Chang AN, Goga A. PMID: 23913442.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansAnimalsCells
    61. Pathogenesis of idiopathic pulmonary fibrosis. Annu Rev Pathol. 2014; 9:157-79. Wolters PJ, Collard HR, Jones KD. PMID: 24050627.
      View in: PubMed   Mentions: 137     Fields:    Translation:HumansCells
    62. Driver mutations among never smoking female lung cancer tissues in China identify unique EGFR and KRAS mutation pattern associated with household coal burning. Respir Med. 2013 Nov; 107(11):1755-62. Hosgood HD, Pao W, Rothman N, Hu W, Pan YH, Kuchinsky K, Jones KD, Xu J, Vermeulen R, Simko J, Lan Q. PMID: 24055406.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansPHPublic Health
    63. Whence lepidic?: the history of a Canadian neologism. Arch Pathol Lab Med. 2013 Dec; 137(12):1822-4. Jones KD. PMID: 23937575.
      View in: PubMed   Mentions: 3     Fields:    
    64. Radiographic fibrosis score predicts survival in hypersensitivity pneumonitis. Chest. 2013 Aug; 144(2):586-592. Mooney JJ, Elicker BM, Urbania TH, Agarwal MR, Ryerson CJ, Nguyen MLT, Woodruff PG, Jones KD, Collard HR, King TE, Koth LL. PMID: 23392130.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    65. Data set for reporting of lung carcinomas: recommendations from International Collaboration on Cancer Reporting. Arch Pathol Lab Med. 2013 Aug; 137(8):1054-62. Jones KD, Churg A, Henderson DW, Hwang DM, Ma Wyatt J, Nicholson AG, Rice AJ, Washington MK, Butnor KJ. PMID: 23899061.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    66. Clinical features and outcomes in combined pulmonary fibrosis and emphysema in idiopathic pulmonary fibrosis. Chest. 2013 Jul; 144(1):234-240. Ryerson CJ, Hartman T, Elicker BM, Ley B, Lee JS, Abbritti M, Jones KD, King TE, Ryu J, Collard HR. PMID: 23370641.
      View in: PubMed   Mentions: 58     Fields:    Translation:Humans
    67. The acute respiratory distress syndrome in 2013. Transl Respir Med. 2013 Dec; 1(1):10. Matthay MA, Song Y, Bai C, Jones KD. PMID: 27234392.
      View in: PubMed   Mentions:
    68. Association of large-airway lymphocytic bronchitis with bronchiolitis obliterans syndrome. Am J Respir Crit Care Med. 2013 Feb 15; 187(4):417-23. Greenland JR, Jones KD, Hays SR, Golden JA, Urisman A, Jewell NP, Caughey GH, Trivedi NN. PMID: 23239157.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    69. Rasamsonia argillacea pulmonary and aortic graft infection in an immune-competent patient. J Clin Microbiol. 2013 Feb; 51(2):719-22. Doyon JB, Sutton DA, Theodore P, Dhillon G, Jones KD, Thompson EH, Fu J, Wickes BL, Koehler JE, Schwartz BS. PMID: 23241382.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimals
    70. Prevalence and prognosis of unclassifiable interstitial lung disease. Eur Respir J. 2013 Sep; 42(3):750-7. Ryerson CJ, Urbania TH, Richeldi L, Mooney JJ, Lee JS, Jones KD, Elicker BM, Koth LL, King TE, Wolters PJ, Collard HR. PMID: 23222877.
      View in: PubMed   Mentions: 38     Fields:    Translation:Humans
    71. Prevalence and clinical significance of circulating autoantibodies in idiopathic pulmonary fibrosis. Respir Med. 2013 Feb; 107(2):249-55. Lee JS, Kim EJ, Lynch KL, Elicker B, Ryerson CJ, Katsumoto TR, Shum AK, Wolters PJ, Cerri S, Richeldi L, Jones KD, King TE, Collard HR. PMID: 23186614.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    72. Cleaved cytokeratin-18 is a mechanistically informative biomarker in idiopathic pulmonary fibrosis. Respir Res. 2012 Nov 20; 13:105. Cha SI, Ryerson CJ, Lee JS, Kukreja J, Barry SS, Jones KD, Elicker BM, Kim DS, Papa FR, Collard HR, Wolters PJ. PMID: 23167970.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    73. Rapidly progressive pulmonary venoocclusive disease in young women taking oral contraceptives. J Heart Lung Transplant. 2012 Sep; 31(9):1031-6. Urisman A, Leard LE, Nathan M, Elicker BM, Hoopes C, Kukreja J, Jones KD. PMID: 22884388.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    74. The diagnosis and management of intradiaphragmatic extralobar pulmonary sequestrations: a report of 4 cases. J Pediatr Surg. 2012 Aug; 47(8):1501-5. Nijagal A, Jelin E, Feldstein VA, Courtier J, Urisman A, Jones KD, Lee H, Hirose S, MacKenzie TC. PMID: 22901907.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    75. Management of plastic bronchitis with topical tissue-type plasminogen activator. Pediatrics. 2012 Aug; 130(2):e446-50. Gibb E, Blount R, Lewis N, Nielson D, Church G, Jones K, Ly N. PMID: 22802609.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    76. Pulmonary interstitial glycogenosis: an unrecognized etiology of persistent pulmonary hypertension of the newborn in congenital heart disease? Pediatr Cardiol. 2013 Jun; 34(5):1254-7. Radman MR, Goldhoff P, Jones KD, Azakie A, Datar S, Adatia I, Oishi PE, Fineman JR. PMID: 22614905.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    77. A multidimensional index and staging system for idiopathic pulmonary fibrosis. Ann Intern Med. 2012 May 15; 156(10):684-91. Ley B, Ryerson CJ, Vittinghoff E, Ryu JH, Tomassetti S, Lee JS, Poletti V, Buccioli M, Elicker BM, Jones KD, King TE, Collard HR. PMID: 22586007.
      View in: PubMed   Mentions: 168     Fields:    Translation:Humans
    78. Validation of interobserver agreement in lung cancer assessment: hematoxylin-eosin diagnostic reproducibility for non-small cell lung cancer: the 2004 World Health Organization classification and therapeutically relevant subsets. Arch Pathol Lab Med. 2013 Jan; 137(1):32-40. Grilley-Olson JE, Hayes DN, Moore DT, Leslie KO, Wilkerson MD, Qaqish BF, Hayward MC, Cabanski CR, Yin X, Socinski MA, Stinchcombe TE, Thorne LB, Allen TC, Banks PM, Beasley MB, Borczuk AC, Cagle PT, Christensen R, Colby TV, Deblois GG, Elmberger G, Graziano P, Hart CF, Jones KD, Maia DM, Miller CR, Nance KV, Travis WD, Funkhouser WK. PMID: 22583114.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    79. Relative versus absolute change in forced vital capacity in idiopathic pulmonary fibrosis. Thorax. 2012 May; 67(5):407-11. Richeldi L, Ryerson CJ, Lee JS, Wolters PJ, Koth LL, Ley B, Elicker BM, Jones KD, King TE, Ryu JH, Collard HR. PMID: 22426899.
      View in: PubMed   Mentions: 37     Fields:    Translation:Humans
    80. Lung mast cell density defines a subpopulation of patients with idiopathic pulmonary fibrosis. Histopathology. 2012 Jul; 61(1):98-106. Cha SI, Chang CS, Kim EK, Lee JW, Matthay MA, Golden JA, Elicker BM, Jones K, Collard HR, Wolters PJ. PMID: 22394225.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    81. Histopathologic approach to the surgical lung biopsy in interstitial lung disease. Clin Chest Med. 2012 Mar; 33(1):27-40. Jones KD, Urisman A. PMID: 22365243.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    82. A practical molecular assay to predict survival in resected non-squamous, non-small-cell lung cancer: development and international validation studies. Lancet. 2012 Mar 03; 379(9818):823-32. Kratz JR, He J, Van Den Eeden SK, Zhu ZH, Gao W, Pham PT, Mulvihill MS, Ziaei F, Zhang H, Su B, Zhi X, Quesenberry CP, Habel LA, Deng Q, Wang Z, Zhou J, Li H, Huang MC, Yeh CC, Segal MR, Ray MR, Jones KD, Raz DJ, Xu Z, Jahan TM, Berryman D, He B, Mann MJ, Jablons DM. PMID: 22285053.
      View in: PubMed   Mentions: 117     Fields:    Translation:Humans
    83. Cough predicts prognosis in idiopathic pulmonary fibrosis. Respirology. 2011 Aug; 16(6):969-75. Ryerson CJ, Abbritti M, Ley B, Elicker BM, Jones KD, Collard HR. PMID: 21615619.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    84. Activated Notch1 induces lung adenomas in mice and cooperates with Myc in the generation of lung adenocarcinoma. Cancer Res. 2011 Sep 15; 71(18):6010-8. Allen TD, Rodriguez EM, Jones KD, Bishop JM. PMID: 21803744.
      View in: PubMed   Mentions: 44     Fields:    Translation:HumansAnimals
    85. Gastroesophageal reflux therapy is associated with longer survival in patients with idiopathic pulmonary fibrosis. Am J Respir Crit Care Med. 2011 Dec 15; 184(12):1390-4. Lee JS, Ryu JH, Elicker BM, Lydell CP, Jones KD, Wolters PJ, King TE, Collard HR. PMID: 21700909.
      View in: PubMed   Mentions: 81     Fields:    Translation:Humans
    86. CT-guided biopsy of bone and soft-tissue lesions: role of on-site immediate cytologic evaluation. J Vasc Interv Radiol. 2011 Jul; 22(7):1024-30. Virayavanich W, Ringler MD, Chin CT, Baum T, Giaconi JC, O'Donnell RJ, Horvai AE, Jones KD, Link TM. PMID: 21570872.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    87. Interaction between MYC and MCL1 in the genesis and outcome of non-small-cell lung cancer. Cancer Res. 2011 Mar 15; 71(6):2212-21. Allen TD, Zhu CQ, Jones KD, Yanagawa N, Tsao MS, Bishop JM. PMID: 21406400.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimals
    88. Plasma biomarker profiles in acute exacerbation of idiopathic pulmonary fibrosis. . 2010 Jul; 299(1):L3-7. Collard HR, Calfee CS, Wolters PJ, Song JW, Hong SB, Brady S, Ishizaka A, Jones KD, King TE, Matthay MA, Kim DS. PMID: 20418386.
      View in: PubMed   Mentions:
    89. An update on lung cancer staging. Adv Anat Pathol. 2010 Jan; 17(1):33-7. Jones KD. PMID: 20032636.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    90. Identification of an autoantigen demonstrates a link between interstitial lung disease and a defect in central tolerance. Sci Transl Med. 2009 Dec 02; 1(9):9ra20. Shum AK, DeVoss J, Tan CL, Hou Y, Johannes K, O'Gorman CS, Jones KD, Sochett EB, Fong L, Anderson MS. PMID: 20368189.
      View in: PubMed   Mentions: 26     Fields:    Translation:Animals
    91. Evaluation of diffuse liver steatosis by ultrasound, computed tomography, and magnetic resonance imaging: which modality is best? Clin Imaging. 2009 Mar-Apr; 33(2):110-5. Qayyum A, Chen DM, Breiman RS, Westphalen AC, Yeh BM, Jones KD, Lu Y, Coakley FV, Callen PW. PMID: 19237053.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    92. Role of cyclin D1 as a mediator of c-Met- and beta-catenin-induced hepatocarcinogenesis. Cancer Res. 2009 Jan 01; 69(1):253-61. Patil MA, Lee SA, Macias E, Lam ET, Xu C, Jones KD, Ho C, Rodriguez-Puebla M, Chen X. PMID: 19118010.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansAnimalsCells
    93. Fatal diffuse alveolar damage in two lung transplant patients treated with cetuximab. J Heart Lung Transplant. 2007 Dec; 26(12):1340-4. Leard LE, Cho BK, Jones KD, Hays SR, Tope WD, Golden JA, Hoopes CW. PMID: 18096489.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    94. Squamous metaplasia amplifies pathologic epithelial-mesenchymal interactions in COPD patients. J Clin Invest. 2007 Nov; 117(11):3551-62. Araya J, Cambier S, Markovics JA, Wolters P, Jablons D, Hill A, Finkbeiner W, Jones K, Broaddus VC, Sheppard D, Barzcak A, Xiao Y, Erle DJ, Nishimura SL. PMID: 17965775.
      View in: PubMed   Mentions: 80     Fields:    Translation:HumansAnimalsCells
    95. Distinct pathways of genomic progression to benign and malignant tumors of the liver. Proc Natl Acad Sci U S A. 2007 Sep 11; 104(37):14771-6. Tward AD, Jones KD, Yant S, Cheung ST, Fan ST, Chen X, Kay MA, Wang R, Bishop JM. PMID: 17785413.
      View in: PubMed   Mentions: 87     Fields:    Translation:HumansAnimals
    96. Idiopathic nonspecific interstitial pneumonia: lung manifestation of undifferentiated connective tissue disease? Am J Respir Crit Care Med. 2007 Oct 01; 176(7):691-7. Kinder BW, Collard HR, Koth L, Daikh DI, Wolters PJ, Elicker B, Jones KD, King TE. PMID: 17556720.
      View in: PubMed   Mentions: 66     Fields:    Translation:Humans
    97. A new mouse model to explore the initiation, progression, and therapy of BRAFV600E-induced lung tumors. Genes Dev. 2007 Feb 15; 21(4):379-84. Dankort D, Filenova E, Collado M, Serrano M, Jones K, McMahon M. PMID: 17299132.
      View in: PubMed   Mentions: 183     Fields:    Translation:Animals
    98. High prevalence of pulmonary arterial thrombi in donor lungs rejected for transplantation. J Heart Lung Transplant. 2005 Oct; 24(10):1650-6. Ware LB, Fang X, Wang Y, Babcock WD, Jones K, Matthay MA. PMID: 16210143.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    99. Transcript signatures of lymphocytic bronchitis in lung allograft biopsy specimens. J Heart Lung Transplant. 2005 Aug; 24(8):1055-66. Xu X, Golden JA, Dolganov G, Jones KD, Donnelly S, Weaver T, Caughey GH. PMID: 16102441.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    100. c-Kit immunophenotyping and metalloproteinase expression profiles of mast cells in interstitial lung diseases. J Pathol. 2005 Jul; 206(3):279-90. Edwards ST, Cruz AC, Donnelly S, Dazin PF, Schulman ES, Jones KD, Wolters PJ, Hoopes C, Dolganov GM, Fang KC. PMID: 15887294.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    101. Obstipation as a paraneoplastic presentation of small cell lung cancer: case report and literature review. Neurogastroenterol Motil. 2005 Feb; 17(1):16-22. Jun S, Dimyan M, Jones KD, Ladabaum U. PMID: 15670259.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    102. Genomic progression in mouse models for liver tumors. Cold Spring Harb Symp Quant Biol. 2005; 70:217-24. Tward AD, Jones KD, Yant S, Kay MA, Wang R, Bishop JM. PMID: 16869757.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    103. Prostate depiction at endorectal MR spectroscopic imaging: investigation of a standardized evaluation system. Radiology. 2004 Dec; 233(3):701-8. Jung JA, Coakley FV, Vigneron DB, Swanson MG, Qayyum A, Weinberg V, Jones KD, Carroll PR, Kurhanewicz J. PMID: 15564406.
      View in: PubMed   Mentions: 48     Fields:    Translation:Humans
    104. Induction of mast cell activation and CC chemokine responses in remodeling tracheal allografts. Am J Respir Cell Mol Biol. 2004 Aug; 31(2):154-61. Cruz AC, Hall TS, Jones KD, Edwards ST, Fang KC. PMID: 15059785.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    105. Isolated pulmonary arteriovenous malformations requiring anatomic resection. J Thorac Cardiovasc Surg. 2004 Feb; 127(2):574-6. Mann MJ, Kramer MJ, Hall TS, Anastassiou P, Katz J, Golden J, Jones K, Jablons DM. PMID: 14762372.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    106. Prostate cancer localization with endorectal MR imaging and MR spectroscopic imaging: effect of clinical data on reader accuracy. Radiology. 2004 Jan; 230(1):215-20. Dhingsa R, Qayyum A, Coakley FV, Lu Y, Jones KD, Swanson MG, Carroll PR, Hricak H, Kurhanewicz J. PMID: 14695396.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    107. Lung pathology in patients with congenital diaphragmatic hernia treated with fetal surgical intervention, including tracheal occlusion. Pediatr Dev Pathol. 2003 Nov-Dec; 6(6):536-46. Heerema AE, Rabban JT, Sydorak RM, Harrison MR, Jones KD. PMID: 15018453.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    108. Death from donor-transmitted malignancy despite emergency liver retransplantation. Liver Transpl. 2003 Oct; 9(10):1102-7. Lipshutz GS, Baxter-Lowe LA, Nguyen T, Jones KD, Ascher NL, Feng S. PMID: 14526407.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    109. Lymphangioleiomyomatosis and SZ alpha(1)-antitrypsin disease: a unique combination? Chest. 2003 Aug; 124(2):763-5. Chan AL, Kwack S, Jones KD, Glassberg MK, Gherman CR. PMID: 12907573.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    110. Role of Epstein-Barr virus and cytomegalovirus in the etiology of benign parotid tumors. Head Neck. 2002 May; 24(5):443-50. Laane CJ, Murr AH, Mhatre AN, Jones KD, Lalwani AK. PMID: 12001074.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    111. Prostate cancer tumor volume: measurement with endorectal MR and MR spectroscopic imaging. Radiology. 2002 Apr; 223(1):91-7. Coakley FV, Kurhanewicz J, Lu Y, Jones KD, Swanson MG, Chang SD, Carroll PR, Hricak H. PMID: 11930052.
      View in: PubMed   Mentions: 53     Fields:    Translation:Humans
    112. Low tidal volume reduces epithelial and endothelial injury in acid-injured rat lungs. Am J Respir Crit Care Med. 2002 Jan 15; 165(2):242-9. Frank JA, Gutierrez JA, Jones KD, Allen L, Dobbs L, Matthay MA. PMID: 11790662.
      View in: PubMed   Mentions: 78     Fields:    Translation:Animals
    113. SCVIR annual meeting film panel session: diagnosis and discussion of case 1. J Vasc Interv Radiol. 2000 Apr; 11(4):516-21. Sonne DC, LaBerge JM, Jones KD, Wilson MW. PMID: 10787213.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    114. Interpretation of biopsy findings in the transplant liver. Semin Diagn Pathol. 1998 Nov; 15(4):306-17. Jones KD, Ferrell LD. PMID: 9845431.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
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