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Chiung-Yu Huang, PhD

Title(s)Professor, Epidemiology & Biostatistics
SchoolSchool of Medicine
ORCID ORCID Icon0000-0003-2313-3562 Additional info
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    Collapse Biography 
    Collapse Education and Training
    National Tsing-Hua University, TaiwanBS (Mathematics)1991-1994
    National Tsing-Hua University, TaiwanMS (Mathematics)1994-1996
    Johns Hopkins University, Baltimore, MDPhD (Biostatistics)1997-2002
    University of Minnesota, Minneapolis, MNAssistant Professor2002-2004
    National Institutes of Health, Bethesda, MDMathematical Statistician2004-2013
    Johns Hopkins University, Baltimore, MDAssociate Professor2013-2017
    Johns Hopkins University, Baltimore, MDAdjunct Professor2018-
    University of California, San Francisco, CAProfessor2017-
    Collapse Awards and Honors
    Department of Biostatistics, Johns Hopkins University, Baltimore, MD2002Margaret Merrell Award
    National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD2007NIAID Merit Award
    National Tainan Girls' Senior High School, Tainan, Taiwan2017Distinguished Alumni Award
    American Statistical Association2018Elected Fellow

    Collapse Overview 
    Collapse Overview
    Dr. Chiung-Yu Huang is Professor of Biostatistics at the Department of Epidemiology and Biostatistics and an elected Fellow of the American Statistical Association (ASA). She is a Member of the UCSF Helen Diller Family Comprehensive Cancer Center and an Adjunct Professor at the Johns Hopkins University Sidney Kimmel Comprehensive Cancer Center. She is recognized for her novel methodology research in survival analysis, competing risks analysis, recurrent event analysis, outcome-dependent sampling, and design and evaluation of vaccine efficacy trials. Dr. Huang’s recent methodology contributions include (1) methods for combining information from external large databases, such as disease registries, to improve efficiency in the analysis of relatively small-scale studies that collect more detailed patient-level information. The importance of such methods has been recognized as we have now entered the big data era; (2) methods to better model, estimate, and predict the risk of recurrent events to identify individuals who are at a high risk of experiencing recurrent events, allowing one to target these individuals for more intensive monitoring and treatment; (3) statistical methods for analyzing vaccine trials with active or passive surveillance by incorporating information about infecting pathogens collected at the time of infection; (4) efficient statistical methods for survival data collected in prevalent cohort studies. (5) benefit-risk assessment tools for evaluating treatment risks and benefit in cancer patients with end-stage disease; (6) statistical methods that can properly account for informative clinic visits in the analysis of electronic health records.

    In addition to statistical method research, Dr. Huang has a rich experience in collaborative research across a wide range of areas, including influenza, malaria, transplant, and cancer studies. During her service as a Mathematical Statistician at NIAID, NIH (2004-2013), she worked closely with both extramural and intramural NIH scientists on the design, conduct, monitoring, analysis, and presentation of preclinical and clinical studies. She served as a statistician to the NIAID Influenza Research Collaboration (NIRC) and the Mexican Emerging Infectious Disease Clinical Research Network (La Red), and was a statistical reviewer to the Infectious Disease Clinical Research Program (IDCRP) and several intramural laboratories within NIAID. She has received numerous awards for her collaborative research, including the prestigious NIAID Merit Award. Prior to joining UCSF, she was an Associate Professor at the Johns Hopkins University Sidney Kimmel Comprehensive Cancer Center (2013-2017), where she served as the lead statistician to the Breast and Ovarian Cancer Program. She also worked closely with the Transplant and Oncology Infectious Diseases Programs in modeling and characterizing morbidities attributable to infections occurring after solid organ transplants (SOT) and hematopoietic stem cell transplants (HSCT). Since joining UCSF in 2017, she has been serving as the lead statistician to the Hematopoietic Malignancies Program at UCSF Helen Diller Family Comprehensive Cancer Center and is the primary statistician to the University of California Hematologic Malignancies Consortium (UCHMC).

    Collapse Research 
    Collapse Research Activities and Funding
    Comparing Patient Centered Outcomes in the Management of Pain between Emergency Departments and Dedicated Acute Care Facilities for Adults with Sickle Cell disease
    PCORI HIS-1403-11888Sep 1, 2017 - Dec 31, 2018
    Role: Statistician/Principal Investigator (Subaward)
    Statistical Methods for Survival and Recurrent Event Data in Clinical Research
    NIH/NCI R01CA193888Jul 1, 2015 - Jun 30, 2020
    Role: Principal Investigator
    Reprogramming the pancreatic tumor microenvironment with immunotherapy
    NIH/NCI R01CA197296Jul 1, 2015 - Jun 30, 2020
    Role: Statistician/Principal Investigator (Subaward)

    Collapse ORNG Applications 
    Collapse Websites

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
    List All   |   Timeline
    1. Huang CY and Qin J.. A unified approach for synthesizing auxiliary covariate effect information in estimating the Cox model. Statistics in Medicine. 2020.
    2. Sheng Y, Sun Y, Deng D, Huang CY.. Censored linear regression in the presence or absence of auxiliary survival information. Biometrics. 2020.
    3. Lobach I, Sheng Y, Lobach S, Zablotska L, Huang CY. Case-control versus case-only estimates of gene-environment interactions with common and misclassified clinical diagnosis. Genet Epidemiol. 2019 Oct 30. PMID: 31667895.
      View in: PubMed
    4. Xu G, Chiou S, Yan J, Marr K, Huang CY.. Generalized scale-change models for recurrent event processes under informative censoring. Statistica Sinica. 2019.
    5. Huang LW, Sheng Y, Andreadis C, Logan AC, Mannis GN, Smith CC, Gaensler KML, Martin TG, Damon LE, Steinman MA, Huang CY, Olin RL. Functional status as measured by geriatric assessment predicts inferior survival in older allogeneic hematopoietic cell transplant recipients. Biol Blood Marrow Transplant. 2019 Sep 04. PMID: 31493541.
      View in: PubMed
    6. Connolly RM, Huang CY, Stearns V, Wahl RL. Reply to E. Hindié et al. J Clin Oncol. 2019 Aug 10; 37(23):2092-2093. PMID: 31251693.
      View in: PubMed
    7. Chiou S, Huang CY, Xu G, Yan J.Semiparametric regression analysis of panel count data: a practical review. International Statistical Review. 2019; 1(87):24-43.
    8. Connolly RM, Leal JP, Solnes L, Huang CY, Carpenter A, Gaffney K, Abramson V, Carey LA, Liu MC, Rimawi M, Specht J, Storniolo AM, Valero V, Vaklavas C, Krop IE, Winer EP, Camp M, Miller RS, Wolff AC, Cimino-Mathews A, Park BH, Wahl RL, Stearns V. TBCRC026: Phase II Trial Correlating Standardized Uptake Value With Pathologic Complete Response to Pertuzumab and Trastuzumab in Breast Cancer. J Clin Oncol. 2019 Mar 20; 37(9):714-722. PMID: 30721110.
      View in: PubMed
    9. Nawas MT, Andreadis C, Martin TG, Wolf JL, Ai WZ, Kaplan LD, Mannis GN, Logan AC, Damon LE, Huang CY, Olin RL. Limitation in Patient-Reported Function Is Associated with Inferior Survival in Older Adults Undergoing Autologous Hematopoietic Cell Transplantation. Biol Blood Marrow Transplant. 2019 Jun; 25(6):1218-1224. PMID: 30708189.
      View in: PubMed
    10. Lee CH, Huang CY, DeFor TE, Brunstein CG, Weisdorf DJ, Luo X. SEMIPARAMETRIC REGRESSION MODEL FOR RECURRENT BACTERIAL INFECTIONS AFTER HEMATOPOIETIC STEM CELL TRANSPLANTATION. Stat Sin. 2019; 29(3):1489-1509. PMID: 31511757.
      View in: PubMed
    11. Lanzkron S, Little J, Field J, Shows JR, Wang H, Seufert R, Brooks J, Varadhan R, Haywood C, Saheed M, Huang CY, Griffin B, Frymark S, Piehet A, Robertson D, Proudford M, Kincaid A, Green C, Burgess L, Wallace M, Segal J. Increased acute care utilization in a prospective cohort of adults with sickle cell disease. Blood Adv. 2018 09 25; 2(18):2412-2417. PMID: 30254105.
      View in: PubMed
    12. Sun Y, Qin J, Huang CY. Missing Information Principle: A Unified Approach for General Truncated and Censored Survival Data Problems. Stat Sci. 2018 May; 33(2):261-276. PMID: 31327890.
      View in: PubMed
    13. Jose JJM, Brahmadathan KN, Abraham VJ, Huang CY, Morens D, Hoe NP, Follmann DA, Krause RM. Streptococcal group A, C and G pharyngitis in school children: a prospective cohort study in Southern India. Epidemiol Infect. 2018 05; 146(7):848-853. PMID: 29616606.
      View in: PubMed
    14. Chiou SH, Xu G, Yan J, Huang CY. Semiparametric estimation of the accelerated mean model with panel count data under informative examination times. Biometrics. 2018 09; 74(3):944-953. PMID: 29286532.
      View in: PubMed
    15. Follmann D, Huang CY. Sieve analysis using the number of infecting pathogens. Biometrics. 2018 09; 74(3):1023-1033. PMID: 29238965.
      View in: PubMed
    16. Lyu T, Luo X, Xu G, Huang CY. Induced smoothing for rank-based regression with recurrent gap time data. Stat Med. 2018 03 30; 37(7):1086-1100. PMID: 29205446.
      View in: PubMed
    17. Lee CH, Huang CY, Xu G, Luo X. Semiparametric regression analysis for alternating recurrent event data. Stat Med. 2018 03 15; 37(6):996-1008. PMID: 29171035.
      View in: PubMed
    18. Murphy AG, Foley K, Rucki AA, Xia T, Jaffee EM, Huang CY, Zheng L. Stromal Annexin A2 expression is predictive of decreased survival in pancreatic cancer. Oncotarget. 2017 Dec 05; 8(63):106405-106414. PMID: 29290958.
      View in: PubMed
    19. Xu G, Sit T, Wang L, Huang CY. Estimation and Inference of Quantile Regression for Survival Data Under Biased Sampling. J Am Stat Assoc. 2017; 112(520):1571-1586. PMID: 30078919.
      View in: PubMed
    20. Shrestha B, Sun Y, Faisal F, Kim V, Soares K, Blair A, Herman JM, Narang A, Dholakia AS, Rosati L, Hacker-Prietz A, Chen L, Laheru DA, De Jesus-Acosta A, Le DT, Donehower R, Azad N, Diaz LA, Murphy A, Lee V, Fishman EK, Hruban RH, Liang T, Cameron JL, Makary M, Weiss MJ, Ahuja N, He J, Wolfgang CL, Huang CY, Zheng L. Long-term survival benefit of upfront chemotherapy in patients with newly diagnosed borderline resectable pancreatic cancer. Cancer Med. 2017 Jul; 6(7):1552-1562. PMID: 28639410.
      View in: PubMed
    21. Sengupta S, Nagalingam A, Muniraj N, Bonner MY, Mistriotis P, Afthinos A, Kuppusamy P, Lanoue D, Cho S, Korangath P, Shriver M, Begum A, Merino VF, Huang CY, Arbiser JL, Matsui W, Gyorffy B, Konstantopoulos K, Sukumar S, Marignani PA, Saxena NK, Sharma D. Activation of tumor suppressor LKB1 by honokiol abrogates cancer stem-like phenotype in breast cancer via inhibition of oncogenic Stat3. Oncogene. 2017 10 12; 36(41):5709-5721. PMID: 28581518.
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    22. Xu G, Chiou SH, Huang CY, Wang MC, Yan J. Joint scale-change models for recurrent events and failure time. J Am Stat Assoc. 2017; 112(518):794-805. PMID: 28943684.
      View in: PubMed
    23. Sun Y, Huang CY, Wang MC. Nonparametric Benefit-Risk Assessment Using Marker Process in the Presence of a Terminal Event. J Am Stat Assoc. 2017; 112(518):826-836. PMID: 29731529.
      View in: PubMed
    24. Huang CY, Qin J, Tsai HT. Efficient Estimation of the Cox Model With Auxiliary Subgroup Survival Information. J Am Stat Assoc. 2016; 111(514):787-799. PMID: 27990035.
      View in: PubMed
    25. Follmann D, Huang CY, Gabriel E. Who really gets strep sore throat? Confounding and effect modification of a time-varying exposure on recurrent events. Stat Med. 2016 10 30; 35(24):4398-4412. PMID: 27313096.
      View in: PubMed
    26. Huang CY, Wang C, Wang MC. Nonparametric analysis of bivariate gap time with competing risks. Biometrics. 2016 09; 72(3):780-90. PMID: 26990686.
      View in: PubMed
    27. Li S, Sun Y, Huang CY, Follmann DA, Krause R. Recurrent event data analysis with intermittently observed time-varying covariates. Stat Med. 2016 08 15; 35(18):3049-65. PMID: 26887664.
      View in: PubMed
    28. Avnir Y, Watson CT, Glanville J, Peterson EC, Tallarico AS, Bennett AS, Qin K, Fu Y, Huang CY, Beigel JH, Breden F, Zhu Q, Marasco WA. IGHV1-69 polymorphism modulates anti-influenza antibody repertoires, correlates with IGHV utilization shifts and varies by ethnicity. Sci Rep. 2016 Feb 16; 6:20842. PMID: 26880249.
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    29. Lee CH, Luo X, Huang CY, DeFor TE, Brunstein CG, Weisdorf DJ. Nonparametric methods for analyzing recurrent gap time data with application to infections after hematopoietic cell transplant. Biometrics. 2016 06; 72(2):535-45. PMID: 26575402.
      View in: PubMed
    30. Skinner J, Huang CY, Waisberg M, Felgner PL, Doumbo OK, Ongoiba A, Kayentao K, Traore B, Crompton PD, Williamson KC. Plasmodium falciparum Gametocyte-Specific Antibody Profiling Reveals Boosting through Natural Infection and Identifies Potential Markers of Gametocyte Exposure. Infect Immun. 2015 Nov; 83(11):4229-36. PMID: 26283330.
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    31. Banga S, Coursen JD, Portugal S, Tran TM, Hancox L, Ongoiba A, Traore B, Doumbo OK, Huang CY, Harty JT, Crompton PD. Impact of acute malaria on pre-existing antibodies to viral and vaccine antigens in mice and humans. PLoS One. 2015; 10(4):e0125090. PMID: 25919588.
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    32. Huang CY, Ning J, Qin J. Semiparametric likelihood inference for left-truncated and right-censored data. Biostatistics. 2015 Oct; 16(4):785-98. PMID: 25796430.
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    33. Follmann D, Huang CY. Incorporating founder virus information in vaccine field trials. Biometrics. 2015 Jun; 71(2):386-96. PMID: 25773491.
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    34. Sibley CT, Estwick T, Zavodni A, Huang CY, Kwan AC, Soule BP, Long Priel DA, Remaley AT, Rudman Spergel AK, Turkbey EB, Kuhns DB, Holland SM, Malech HL, Zarember KA, Bluemke DA, Gallin JI. Assessment of atherosclerosis in chronic granulomatous disease. Circulation. 2014 Dec 02; 130(23):2031-9. PMID: 25239440.
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    35. Doumbo S, Tran TM, Sangala J, Li S, Doumtabe D, Kone Y, Traoré A, Bathily A, Sogoba N, Coulibaly ME, Huang CY, Ongoiba A, Kayentao K, Diallo M, Dramane Z, Nutman TB, Crompton PD, Doumbo O, Traore B. Co-infection of long-term carriers of Plasmodium falciparum with Schistosoma haematobium enhances protection from febrile malaria: a prospective cohort study in Mali. PLoS Negl Trop Dis. 2014 Sep; 8(9):e3154. PMID: 25210876.
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    36. Wang MC, Huang CY. Statistical inference methods for recurrent event processes with shape and size parameters. Biometrika. 2014 Sep 01; 101(3):553-566. PMID: 26412863.
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    37. Gonçalves BP, Huang CY, Morrison R, Holte S, Kabyemela E, Prevots DR, Fried M, Duffy PE. Parasite burden and severity of malaria in Tanzanian children. N Engl J Med. 2014 May 08; 370(19):1799-808. PMID: 24806160.
      View in: PubMed
    38. Avnir Y, Tallarico AS, Zhu Q, Bennett AS, Connelly G, Sheehan J, Sui J, Fahmy A, Huang CY, Cadwell G, Bankston LA, McGuire AT, Stamatatos L, Wagner G, Liddington RC, Marasco WA. Molecular signatures of hemagglutinin stem-directed heterosubtypic human neutralizing antibodies against influenza A viruses. PLoS Pathog. 2014 May; 10(5):e1004103. PMID: 24788925.
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    39. Cheng YJ, Huang CY. Combined estimating equation approaches for semiparametric transformation models with length-biased survival data. Biometrics. 2014 Sep; 70(3):608-18. PMID: 24750126.
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    40. Marciano BE, Huang CY, Joshi G, Rezaei N, Carvalho BC, Allwood Z, Ikinciogullari A, Reda SM, Gennery A, Thon V, Espinosa-Rosales F, Al-Herz W, Porras O, Shcherbina A, Szaflarska A, Kiliç S, Franco JL, Gómez Raccio AC, Roxo P, Esteves I, Galal N, Grumach AS, Al-Tamemi S, Yildiran A, Orellana JC, Yamada M, Morio T, Liberatore D, Ohtsuka Y, Lau YL, Nishikomori R, Torres-Lozano C, Mazzucchelli JT, Vilela MM, Tavares FS, Cunha L, Pinto JA, Espinosa-Padilla SE, Hernandez-Nieto L, Elfeky RA, Ariga T, Toshio H, Dogu F, Cipe F, Formankova R, Nuñez-Nuñez ME, Bezrodnik L, Marques JG, Pereira MI, Listello V, Slatter MA, Nademi Z, Kowalczyk D, Fleisher TA, Davies G, Neven B, Rosenzweig SD. BCG vaccination in patients with severe combined immunodeficiency: complications, risks, and vaccination policies. J Allergy Clin Immunol. 2014 Apr; 133(4):1134-41. PMID: 24679470.
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    41. Tsai HT, Isaacs C, Fu AZ, Warren JL, Freedman AN, Barac A, Huang CY, Potosky AL. Risk of cardiovascular adverse events from trastuzumab (Herceptin(®)) in elderly persons with breast cancer: a population-based study. Breast Cancer Res Treat. 2014 Feb; 144(1):163-70. PMID: 24469642.
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    42. Tran TM, Ongoiba A, Coursen J, Crosnier C, Diouf A, Huang CY, Li S, Doumbo S, Doumtabe D, Kone Y, Bathily A, Dia S, Niangaly M, Dara C, Sangala J, Miller LH, Doumbo OK, Kayentao K, Long CA, Miura K, Wright GJ, Traore B, Crompton PD. Naturally acquired antibodies specific for Plasmodium falciparum reticulocyte-binding protein homologue 5 inhibit parasite growth and predict protection from malaria. J Infect Dis. 2014 Mar 01; 209(5):789-98. PMID: 24133188.
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    43. Matharu K, Zarember KA, Marciano BE, Kuhns DB, Spalding C, Garofalo M, Dimaggio T, Estwick T, Huang CY, Fink D, Priel DL, Fleisher TA, Holland SM, Malech HL, Gallin JI. B-cell activating factor (BAFF) is elevated in chronic granulomatous disease. Clin Immunol. 2013 Aug; 148(2):258-64. PMID: 23773925.
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    44. Waisberg M, Lin CK, Huang CY, Pena M, Orandle M, Bolland S, Pierce SK. The impact of genetic susceptibility to systemic lupus erythematosus on placental malaria in mice. PLoS One. 2013; 8(5):e62820. PMID: 23675429.
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    45. Tran TM, Li S, Doumbo S, Doumtabe D, Huang CY, Dia S, Bathily A, Sangala J, Kone Y, Traore A, Niangaly M, Dara C, Kayentao K, Ongoiba A, Doumbo OK, Traore B, Crompton PD. An intensive longitudinal cohort study of Malian children and adults reveals no evidence of acquired immunity to Plasmodium falciparum infection. Clin Infect Dis. 2013 Jul; 57(1):40-7. PMID: 23487390.
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    46. Luo X, Huang CY, Wang L. Quantile regression for recurrent gap time data. Biometrics. 2013 Jun; 69(2):375-85. PMID: 23489055.
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    47. Galindo-Fraga A, Ortiz-Hernández AA, Ramírez-Venegas A, Vázquez RV, Moreno-Espinosa S, Llamosas-Gallardo B, Pérez-Patrigeon S, Salinger M, Freimanis L, Huang CY, Gu W, Guerrero ML, Beigel J, Ruiz-Palacios GM. Clinical characteristics and outcomes of influenza and other influenza-like illnesses in Mexico City. Int J Infect Dis. 2013 Jul; 17(7):e510-7. PMID: 23416208.
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    48. Huang CY, Qin J. Semiparametric estimation for the additive hazards model with left-truncated and right-censored data. Biometrika. 2013; 100(4):877-888. PMID: 26246622.
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    49. Huang CY, Qin J. Composite Partial Likelihood Estimation Under Length-Biased Sampling, With Application to a Prevalent Cohort Study of Dementia. J Am Stat Assoc. 2012 Sep 01; 107(499):946-857. PMID: 24000265.
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    50. Huang CY, Qin J, Follmann DA. A maximum pseudo-profile likelihood estimator for the Cox model under length-biased sampling. Biometrika. 2012 Mar; 99(1):199-210. PMID: 23843659.
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    51. De Pascalis R, Chou AY, Bosio CM, Huang CY, Follmann DA, Elkins KL. Development of functional and molecular correlates of vaccine-induced protection for a model intracellular pathogen, F. tularensis LVS. PLoS Pathog. 2012 Jan; 8(1):e1002494. PMID: 22275868.
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    52. Srinivasula S, Lempicki RA, Adelsberger JW, Huang CY, Roark J, Lee PI, Rupert A, Stevens R, Sereti I, Lane HC, Di Mascio M, Kovacs JA. Differential effects of HIV viral load and CD4 count on proliferation of naive and memory CD4 and CD8 T lymphocytes. Blood. 2011 Jul 14; 118(2):262-70. PMID: 21562041.
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    53. Sui J, Sheehan J, Hwang WC, Bankston LA, Burchett SK, Huang CY, Liddington RC, Beigel JH, Marasco WA. Wide prevalence of heterosubtypic broadly neutralizing human anti-influenza A antibodies. Clin Infect Dis. 2011 Apr 15; 52(8):1003-9. PMID: 21460314.
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    54. Huang CY, Qin J. Nonparametric estimation for length-biased and right-censored data. Biometrika. 2011 Mar; 98(1):177-186. PMID: 23049126.
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    55. Luo X, Huang CY. Analysis of recurrent gap time data using the weighted risk-set method and the modified within-cluster resampling method. Stat Med. 2011 Feb 20; 30(4):301-11. PMID: 20963733.
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    56. Waisberg M, Tarasenko T, Vickers BK, Scott BL, Willcocks LC, Molina-Cruz A, Pierce MA, Huang CY, Torres-Velez FJ, Smith KG, Barillas-Mury C, Miller LH, Pierce SK, Bolland S. Genetic susceptibility to systemic lupus erythematosus protects against cerebral malaria in mice. Proc Natl Acad Sci U S A. 2011 Jan 18; 108(3):1122-7. PMID: 21187399.
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    57. Huang CY, Luo X, Follmann DA. A model checking method for the proportional hazards model with recurrent gap time data. Biostatistics. 2011 Jul; 12(3):535-47. PMID: 21138876.
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    58. Tavel JA, Huang CY, Shen J, Metcalf JA, Dewar R, Shah A, Vasudevachari MB, Follmann DA, Herpin B, Davey RT, Polis MA, Kovacs J, Masur H, Lane HC. Interferon-alpha produces significant decreases in HIV load. J Interferon Cytokine Res. 2010 Jul; 30(7):461-4. PMID: 20235638.
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    59. Weiss GE, Traore B, Kayentao K, Ongoiba A, Doumbo S, Doumtabe D, Kone Y, Dia S, Guindo A, Traore A, Huang CY, Miura K, Mircetic M, Li S, Baughman A, Narum DL, Miller LH, Doumbo OK, Pierce SK, Crompton PD. The Plasmodium falciparum-specific human memory B cell compartment expands gradually with repeated malaria infections. PLoS Pathog. 2010 May 20; 6(5):e1000912. PMID: 20502681.
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    60. Crompton PD, Miura K, Traore B, Kayentao K, Ongoiba A, Weiss G, Doumbo S, Doumtabe D, Kone Y, Huang CY, Doumbo OK, Miller LH, Long CA, Pierce SK. In vitro growth-inhibitory activity and malaria risk in a cohort study in mali. Infect Immun. 2010 Feb; 78(2):737-45. PMID: 19917712.
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    61. Traore B, Koné Y, Doumbo S, Doumtabé D, Traoré A, Crompton PD, Mircetic M, Huang CY, Kayentao K, Dicko A, Sagara I, Ellis RD, Miura K, Guindo A, Miller LH, Doumbo OK, Pierce SK. The TLR9 agonist CpG fails to enhance the acquisition of Plasmodium falciparum-specific memory B cells in semi-immune adults in Mali. Vaccine. 2009 Dec 09; 27(52):7299-303. PMID: 19712767.
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    62. Beigel JH, Voell J, Huang CY, Burbelo PD, Lane HC. Safety and immunogenicity of multiple and higher doses of an inactivated influenza A/H5N1 vaccine. J Infect Dis. 2009 Aug 15; 200(4):501-9. PMID: 19569973.
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    63. Huang CY, Qin J, Wang MC. Semiparametric analysis for recurrent event data with time-dependent covariates and informative censoring. Biometrics. 2010 Mar; 66(1):39-49. PMID: 19459839.
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    64. Zarember KA, Cruz AR, Huang CY, Gallin JI. Antifungal activities of natural and synthetic iron chelators alone and in combination with azole and polyene antibiotics against Aspergillus fumigatus. Antimicrob Agents Chemother. 2009 Jun; 53(6):2654-6. PMID: 19307370.
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    65. Crompton PD, Mircetic M, Weiss G, Baughman A, Huang CY, Topham DJ, Treanor JJ, Sanz I, Lee FE, Durbin AP, Miura K, Narum DL, Ellis RD, Malkin E, Mullen GE, Miller LH, Martin LB, Pierce SK. The TLR9 ligand CpG promotes the acquisition of Plasmodium falciparum-specific memory B cells in malaria-naive individuals. J Immunol. 2009 Mar 01; 182(5):3318-26. PMID: 19234231.
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    66. Engler RJ, Nelson MR, Klote MM, VanRaden MJ, Huang CY, Cox NJ, Klimov A, Keitel WA, Nichol KL, Carr WW, Treanor JJ. Half- vs full-dose trivalent inactivated influenza vaccine (2004-2005): age, dose, and sex effects on immune responses. Arch Intern Med. 2008 Dec 08; 168(22):2405-14. PMID: 19064822.
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    67. Crompton PD, Traore B, Kayentao K, Doumbo S, Ongoiba A, Diakite SA, Krause MA, Doumtabe D, Kone Y, Weiss G, Huang CY, Doumbia S, Guindo A, Fairhurst RM, Miller LH, Pierce SK, Doumbo OK. Sickle cell trait is associated with a delayed onset of malaria: implications for time-to-event analysis in clinical studies of malaria. J Infect Dis. 2008 Nov 01; 198(9):1265-75. PMID: 18752444.
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    68. Read SW, Lempicki RA, Di Mascio M, Srinivasula S, Burke R, Sachau W, Bosche M, Adelsberger JW, Sereti I, Davey RT, Tavel JA, Huang CY, Issaq HJ, Fox SD, Lane H, Kovacs JA. CD4 T cell survival after intermittent interleukin-2 therapy is predictive of an increase in the CD4 T cell count of HIV-infected patients. J Infect Dis. 2008 Sep 15; 198(6):843-50. PMID: 18684102.
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    69. Huang CY, Qin J, Follmann DA. Empirical Likelihood-Based Estimation of the Treatment Effect in a Pretest-Posttest Study. J Am Stat Assoc. 2008 Sep 01; 103(483):1270-1280. PMID: 23729942.
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    70. Chiung-Yu Huang, Xianghua Luo.The Statistical Analysis of Recurrent Events by COOK, R. J. and LAWLESS, J. F. Biometrics. 2008; 64(3):987-988.
    71. Luo X, Wang MC, Huang CY. A comparison of various rate functions of a recurrent event process in the presence of a terminal event. Stat Methods Med Res. 2010 Apr; 19(2):167-82. PMID: 18445699.
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    72. Huang CY, Qin J, Zou F .Empirical likelihood-based inference for genetic mixture models. Canadian Journal of Statistics. 2007; 35(4):563-574.
    73. Khaliq AA, Huang CY, Ganti AK, Invie K, Smego RA. Comparison of resource utilization and clinical outcomes between teaching and nonteaching medical services. J Hosp Med. 2007 May; 2(3):150-7. PMID: 17549749.
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    74. Zonios DI, Falloon J, Huang CY, Chaitt D, Bennett JE. Cryptococcosis and idiopathic CD4 lymphocytopenia. Medicine (Baltimore). 2007 Mar; 86(2):78-92. PMID: 17435588.
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    75. Fay MP, Huang CY, Twum-Danso NA. Monitoring rare serious adverse events from a new treatment and testing for a difference from historical controls. Clin Trials. 2007; 4(6):598-610. PMID: 18042569.
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    76. Huang CY, Wang MC, Zhang Y. Analysing panel count data with informative observation times. Biometrika. 2006 Dec; 93(4):763-775. PMID: 23729818.
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    77. Walter Bockting, Chiung-Yu Huang, Hua Ding, Beatrice “Bean” Robinson, BR Simon Rosser.Are transgender persons at higher risk for HIV than other sexual minorities? A comparison of HIV prevalence and risks. International Journal of Transgenderism. 2005; 8(2-3):123-131.
    78. Khaliq AA, Dimassi H, Huang CY, Narine L, Smego RA. Disciplinary action against physicians: who is likely to get disciplined? Am J Med. 2005 Jul; 118(7):773-7. PMID: 15989912.
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    79. Huang CY, Wang MC. Nonparametric estimation of the bivariate recurrence time distribution. Biometrics. 2005 Jun; 61(2):392-402. PMID: 16011685.
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    80. Chiang CT, Wang MC, Huang CY. Kernel Estimation of Rate Function for Recurrent Event Data. Scand Stat Theory Appl. 2005 Mar; 32(1):77-91. PMID: 24062598.
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    81. Huang CY, Wang MC. Joint Modeling and Estimation for Recurrent Event Processes and Failure Time Data. J Am Stat Assoc. 2004 12; 99(468):1153-1165. PMID: 24068850.
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    82. Hu TC, Huang C, Rosalsky A.On stability of trimmed sums. Probability and Mathematical Statistics. 2003; 23(1):153-172.
    83. Rosenblatt A, Brinkman RR, Liang KY, Almqvist EW, Margolis RL, Huang CY, Sherr M, Franz ML, Abbott MH, Hayden MR, Ross CA. Familial influence on age of onset among siblings with Huntington disease. Am J Med Genet. 2001 Jul 08; 105(5):399-403. PMID: 11449389.
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    84. Liang KY, Huang CY, Beaty TH. A unified sampling approach for multipoint analysis of qualitative and quantitative traits in sib pairs. Am J Hum Genet. 2000 May; 66(5):1631-41. PMID: 10762548.
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