Pratik Mukherjee, MD, PhD

Title(s)Professor, Radiology
SchoolSchool of Medicine
Address185 Berry Street Bldg B
San Francisco CA 94158
Phone415-353-8972 ext. 23852
ORCID ORCID Icon0000-0001-7473-7409 Additional info
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    Collapse Biography 
    Collapse Education and Training
    Cornell UniversityM.D.1995School of Medicine
    Collapse Awards and Honors
    Academy of Radiology Research2017Distinguished Investigator Award
    Harvard Conference Center, Boston, MA2016Keynote Lecture, New England Roentgen Ray Society
    Duke University, Durham, NC2015E. Ralph Heinz Annual Lecture in Neuroradiology
    Beth Israel Deaconess Medical Center, Harvard Medical School201419th Annual Lawrie B. Morrison Memorial Lecture
    Brain Connectivity2013Editorial Board
    International Symposium on High-field MR in Clinical Applications Conference, Bonn, Germany2012Keynote Lecturer
    GE Healthcare2009MR Thought Leader
    Hospital for Sick Children, Toronto, Canada2008Derek Harwood-Nash Annual Lecture in Neuroradiology
    American Society of Neuroradiology2006Outstanding Presentation Award in Functional Neuroradiology
    American Society of Neuroradiology2005Berlex Best Paper Award in General Neuroradiology
    Neuroradiology Education and Research Foundation2004Scholar Award in Neuroradiology Research
    American Society of Neuroradiology 2001Berlex/ASNR Award in Basic Science Research
    Radiological Society of North America1999Roentgen Resident/Fellow Research Award
    Rockefeler University1994S. Koide Memorial Fellowship
    Radiological Society of North America1989Roentgen Resident/Fellow Research Award
    National Institutes of Health1988  - 1995Medical Scientist Training Program

    Collapse Overview 
    Collapse Overview
    Pratik Mukherjee, MD, PhD, is a Professor in Residence in the Department Radiology and Biomedical Imaging, Bioengineering, and he is an attending neuroradiologist at the University of California, San Francisco. He is the Director of the Center for Imaging of Neurodegenerative Disease (CIND) based at the San Francisco VA Medical Center. He also directs the Neural Connectivity Laboratory (NCL) at UCSF China Basin.

    Dr. Mukherjee received his PhD in Neuroscience from Rockefeller University, New York in 1994 and his MD from Cornell University, New York, in 1995. He completed his internship in Internal Medicine at New York Hospital - Cornell Medical Center, followed by a residency in Radiology and fellowship in Neuroradiology at Washington University Medical Center in St. Louis, Missouri, completed in 2002.

    Dr. Mukherjee’s primary clinical research is the study of neurodevelopmental disorders and traumatic brain injury (TBI) using advanced MRI. His research has been focused on technical development, neuroscience and clinical applications of advanced imaging methods for mapping structure and function of the human brain, especially diffusion MRI, which is a popular technique for assessing the development and integrity of white matter and for mapping axonal fiber pathways.

    Dr. Mukherjee has served as Principal Investigator or Co-Principal Investigator for several NIH grants. His work has also been funded by grants from the Dept. of Defense, the Simons Foundation, McDonnell Foundation, Dana Foundation, Wallace Research Foundation, GE Healthcare and the GE-NFL Head Health Initiative. He has published over 80 peer-reviewed papers.

    Expertise:
    Radiology, Neuroradiology, Pediatric Neuroradiology, Cognitive Neuroscience, Computational Neuroscience

    Specialty:
    Neuroradiology, traumatic brain injury (TBI), neurodevelopmental disorders

    Professional Interests:
    Brain development, computational neuroscience, connectomics, diffusion tensor imaging (DTI), epilepsy, functional MRI (fMRI), machine learning, magnetoencephalography (MEG), pediatric neuroradiology, traumatic brain injury (TBI), ultra-high field MRI, white matter tractography

    Education and Training:
    • Medical School: Cornell University, New York - Medicine
    • Internship: New York Cornell Medical Center - Internal Medicine
    • Residency: Washington University of Medical Center, St. Louis, Missouri - Radiology
    • Fellowship: Washington University Medical Center, St. Louis, Missouri - Neuroradiology
    • Doctor of Philosophy: Rockefeller University, New York - Neuroscience
    • National Board of Medical Examiners Certificate
    • American Board of Radiology Certificate
    • Missouri Medical License
    • California Medical License
    • American Board of Radiology Certificate of Added Qualification Neuroradiology

    Collapse Research 
    Collapse Research Activities and Funding
    ShEEP-IC: Request to purchase MAGNETOM Skyra 3T complete concurrent field monitoring and motion correction system upgrade
    NIH IS1BX005513Oct 1, 2020 - Sep 30, 2021
    Role: Principal Investigator
    Neural Mechanisms of Sensory OverResponsivity
    NIH R01MH116950Jul 8, 2019 - Apr 30, 2024
    Role: Principal Investigator
    ShEEP IC Request to purchase MAGNETOM Terra 7T coil upgrade
    NIH IS1BX004816Jan 1, 2019 - Sep 30, 2019
    Role: Principal Investigator
    ShEEP IC Request to purchase MAGNETOM 7T PTx upgrade
    NIH IS1BX004415Jan 1, 2018 - Sep 30, 2018
    Role: Principal Investigator
    MRI CORTICOGRAPHY: DEVELOPING NEXT GENERATION MICROSCALE HUMAN CORTEX MRI SCANNER
    NIH U01EB025162Sep 30, 2017 - Jul 31, 2022
    Role: Co-Principal Investigator
    Multi-level assessment and rehabilitation of combat mild traumatic brain injury
    NIH I01RX002300Feb 1, 2017 - Sep 30, 2021
    Role: Principal Investigator
    Artificial Intelligence for Imaging of Neurological Emergencies
    California Initiative to Advance Precision Medicine (CIAPM) Feb 1, 2017 - Jul 31, 2018
    Role: Principal Investigator
    MRI Corticography (MRCoG): Micro-scale Human Cortical Imaging
    NIH R24MH106096Sep 26, 2014 - Nov 30, 2018
    Role: Co-Principal Investigator
    Transforming Research and Clinical Knowledge in Traumatic Brain Injury
    NIH U01NS086090Sep 30, 2013 - Aug 31, 2020
    Role: Co-Principal Investigator
    Macrostructural and Microstructural Imaging Biomarkers of Traumatic Brain Injury
    NIH R01NS060776Jul 15, 2009 - Jun 30, 2015
    Role: Principal Investigator

    Collapse ORNG Applications 
    Collapse Clinical Trials
    Collapse Featured Publications

    Collapse Featured Content 
    Collapse Featured Videos

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Pathological Computed Tomography Features Associated With Adverse Outcomes After Mild Traumatic Brain Injury: A TRACK-TBI Study With External Validation in CENTER-TBI. JAMA Neurol. 2021 Sep 01; 78(9):1137-1148. Yuh EL, Jain S, Sun X, Pisica D, Harris MH, Taylor SR, Markowitz AJ, Mukherjee P, Verheyden J, Giacino JT, Levin HS, McCrea M, Stein MB, Temkin NR, Diaz-Arrastia R, Robertson CS, Lingsma HF, Okonkwo DO, Maas AIR, Manley GT, TRACK-TBI Investigators for the CENTER-TBI Investigators , Adeoye O, Badjatia N, Boase K, Bodien Y, Corrigan JD, Crawford K, Dikmen S, Duhaime AC, Ellenbogen R, Feeser VR, Ferguson AR, Foreman B, Gardner R, Gaudette E, Gonzalez L, Gopinath S, Gullapalli R, Hemphill JC, Hotz G, Keene CD, Kramer J, Kreitzer N, Lindsell C, Machamer J, Madden C, Martin A, McAllister T, Merchant R, Nelson L, Ngwenya LB, Noel F, Nolan A, Palacios E, Perl D, Rabinowitz M, Rosand J, Sander A, Satris G, Schnyer D, Seabury S, Toga A, Valadka A, Vassar M, Zafonte R. PMID: 34279565.
      View in: PubMed   Mentions:    Fields:    
    2. Functional Outcomes Over the First Year After Moderate to Severe Traumatic Brain Injury in the Prospective, Longitudinal TRACK-TBI Study. JAMA Neurol. 2021 Aug 01; 78(8):982-992. McCrea MA, Giacino JT, Barber J, Temkin NR, Nelson LD, Levin HS, Dikmen S, Stein M, Bodien YG, Boase K, Taylor SR, Vassar M, Mukherjee P, Robertson C, Diaz-Arrastia R, Okonkwo DO, Markowitz AJ, Manley GT, TRACK-TBI Investigators , Adeoye O, Badjatia N, Bullock MR, Chesnut R, Corrigan JD, Crawford K, Duhaime AC, Ellenbogen R, Feeser VR, Ferguson AR, Foreman B, Gardner R, Gaudette E, Goldman D, Gonzalez L, Gopinath S, Gullapalli R, Hemphill JC, Hotz G, Jain S, Keene CD, Korley FK, Kramer J, Kreitzer N, Lindsell C, Machamer J, Madden C, Martin A, McAllister T, Merchant R, Ngwenya LB, Noel F, Nolan A, Palacios E, Perl D, Puccio A, Rabinowitz M, Rosand J, Sander A, Satris G, Schnyer D, Seabury S, Sherer M, Toga A, Valadka A, Wang K, Yue JK, Yuh E, Zafonte R. PMID: 34228047.
      View in: PubMed   Mentions:    Fields:    
    3. Prognostic Value of Hemorrhagic Brainstem Injury on Early Computed Tomography: A TRACK-TBI Study. Neurocrit Care. 2021 Jul 26. Williams JR, Nieblas-Bedolla E, Feroze A, Young C, Temkin NR, Giacino JT, Okonkwo DO, Manley GT, Barber J, Durfy S, Markowitz AJ, Yuh EL, Mukherjee P, Mac Donald CL, and The Transforming Research and Clinical Knowledge in Traumatic Brain Injury (TRACK-TBI) Investiga . PMID: 34309784.
      View in: PubMed   Mentions:    Fields:    
    4. Interrater Reliability of NIH TBI Imaging Common Data Elements for Brain MRI in Mild TBI. J Neurotrauma. 2021 Jul 17. Rincon SP, Mukherjee P, Levin H, Temkin N, Mac Donald CL, Krainak DM, Sun X, Jain S, Taylor SR, Markowitz A, Kumar A, Manley GT, Yuh EL. PMID: 34275326.
      View in: PubMed   Mentions:    Fields:    
    5. Cognitive impairment after focal brain lesions is better predicted by damage to structural than functional network hubs. Proc Natl Acad Sci U S A. 2021 May 11; 118(19). Reber J, Hwang K, Bowren M, Bruss J, Mukherjee P, Tranel D, Boes AD. PMID: 33941692.
      View in: PubMed   Mentions:    Fields:    
    6. Predictors of six-month inability to return to work in previously employed subjects after mild traumatic brain injury: A TRACK-TBI pilot study. J Concussion. 2021 Jan-Dec; 5. Yue JK, Phelps RR, Hemmerle DD, Upadhyayula PS, Winkler EA, Deng H, Chang D, Vassar MJ, Taylor SR, Schnyer DM, Lingsma HF, Puccio AM, Yuh EL, Mukherjee P, Huang MC, Ngwenya LB, Valadka AB, Markowitz AJ, Okonkwo DO, Manley GT, TRACK-TBI Investigators . PMID: 34046212.
      View in: PubMed   Mentions:
    7. Association of Sex and Age With Mild Traumatic Brain Injury-Related Symptoms: A TRACK-TBI Study. JAMA Netw Open. 2021 04 01; 4(4):e213046. Levin HS, Temkin NR, Barber J, Nelson LD, Robertson C, Brennan J, Stein MB, Yue JK, Giacino JT, McCrea MA, Diaz-Arrastia R, Mukherjee P, Okonkwo DO, Boase K, Markowitz AJ, Bodien Y, Taylor S, Vassar MJ, Manley GT, TRACK-TBI Investigators , Adeoye O, Badjatia N, Bullock MR, Chesnut R, Corrigan JD, Crawford K, Dikmen S, Duhaime AC, Ellenbogen R, Feeser VR, Ferguson AR, Foreman B, Gardner R, Gaudette E, Gonzalez L, Gopinath S, Gullapalli R, Hemphill JC, Hotz G, Jain S, Keene CD, Korley FK, Kramer J, Kreitzer N, Lindsell C, Machamer J, Madden C, Martin A, McAllister T, Merchant R, Nolan A, Ngwenya LB, Noel F, Palacios E, Puccio A, Rabinowitz M, Rosand J, Sander A, Satris G, Schnyer D, Seabury S, Sun X, Toga A, Valadka A, Wang K, Yuh E, Zafonte R. PMID: 33822070.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    8. A quantitative approach for measuring laterality in clinical fMRI for preoperative language mapping. Neuroradiology. 2021 Sep; 63(9):1489-1500. Olaru M, Nillo RM, Mukherjee P, Sugrue LP. PMID: 33772347.
      View in: PubMed   Mentions:    Fields:    
    9. Latent Profile Analysis of Neuropsychiatric Symptoms and Cognitive Function of Adults 2 Weeks After Traumatic Brain Injury: Findings From the TRACK-TBI Study. JAMA Netw Open. 2021 03 01; 4(3):e213467. Brett BL, Kramer MD, Whyte J, McCrea MA, Stein MB, Giacino JT, Sherer M, Markowitz AJ, Manley GT, Nelson LD, TRACK-TBI Investigators , Adeoye O, Badjatia N, Boase K, Barber J, Bodien Y, Bullock MR, Chesnut R, Corrigan JD, Crawford K, Diaz-Arrastia R, Dikmen S, Duhaime AC, Ellenbogen R, Feeser VR, Ferguson AR, Foreman B, Gardner R, Gaudette E, Gonzalez L, Gopinath S, Gullapalli R, Hemphill JC, Hotz G, Jain S, Keene CD, Korley FK, Kramer J, Kreitzer N, Levin H, Lindsell C, Machamer J, Madden C, Martin A, McAllister T, Merchant R, Mukherjee P, Ngwenya LB, Noel F, Okonkwo D, Palacios E, Puccio A, Rabinowitz M, Robertson C, Rosand J, Sander A, Satris G, Schnyer D, Seabury S, Taylor S, Temkin N, Toga A, Valadka A, Vassar M, Wang K, Yue JK, Yuh E, Zafonte R. PMID: 33783518.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    10. Tractography-Pathology Correlations in Traumatic Brain Injury: A TRACK-TBI Study. J Neurotrauma. 2021 Jun 15; 38(12):1620-1631. Nolan AL, Petersen C, Iacono D, Mac Donald CL, Mukherjee P, van der Kouwe A, Jain S, Stevens A, Diamond BR, Wang R, Markowitz AJ, Fischl B, Perl DP, Manley GT, Keene CD, Diaz-Arrastia R, Edlow BL, TRACK-TBI Investigators . PMID: 33412995.
      View in: PubMed   Mentions: 3     Fields:    
    11. Altered Cerebellar White Matter in Sensory Processing Dysfunction Is Associated With Impaired Multisensory Integration and Attention. Front Psychol. 2020; 11:618436. Narayan A, Rowe MA, Palacios EM, Wren-Jarvis J, Bourla I, Gerdes M, Brandes-Aitken A, Desai SS, Marco EJ, Mukherjee P. PMID: 33613368.
      View in: PubMed   Mentions:
    12. High-Sensitivity C-Reactive Protein is a Prognostic Biomarker of Six-Month Disability after Traumatic Brain Injury: Results from the TRACK-TBI Study. J Neurotrauma. 2021 04 01; 38(7):918-927. Xu LB, Yue JK, Korley F, Puccio AM, Yuh EL, Sun X, Rabinowitz M, Vassar MJ, Taylor SR, Winkler EA, Puffer RC, Deng H, McCrea M, Stein MB, Robertson CS, Levin HS, Dikmen S, Temkin NR, Giacino JT, Mukherjee P, Wang KKW, Okonkwo DO, Markowitz AJ, Jain S, Manley GT, Diaz-Arrastia R, TRACK-TBI Investigators . PMID: 33161875.
      View in: PubMed   Mentions: 3     Fields:    
    13. Satisfaction with Life after Mild Traumatic Brain Injury: A TRACK-TBI Study. J Neurotrauma. 2021 03; 38(5):546-554. Agtarap SD, Campbell-Sills L, Jain S, Sun X, Dikmen S, Levin H, McCrea MA, Mukherjee P, Nelson LD, Temkin N, Yuh EL, Giacino JT, Manley GT, Stein MB, TRACK-TBI Investigators . PMID: 33107371.
      View in: PubMed   Mentions: 2     Fields:    
    14. Data-science ready, multisite, human diffusion MRI white-matter-tract statistics. Sci Data. 2020 11 30; 7(1):422. Lerma-Usabiaga G, Mukherjee P, Perry ML, Wandell BA. PMID: 33257659.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    15. Concussion Disrupts Normal Brain White Matter Microstructural Symmetry. Front Neurol. 2020; 11:548220. Maruta J, Mallott JM, Sulioti G, Ghajar J, Palacios EM, Mukherjee P. PMID: 33262738.
      View in: PubMed   Mentions:
    16. Smaller Regional Brain Volumes Predict Posttraumatic Stress Disorder at 3 Months After Mild Traumatic Brain Injury. Biol Psychiatry Cogn Neurosci Neuroimaging. 2021 03; 6(3):352-359. Stein MB, Yuh E, Jain S, Okonkwo DO, Mac Donald CL, Levin H, Giacino JT, Dikmen S, Vassar MJ, Diaz-Arrastia R, Robertson CS, Nelson LD, McCrea M, Sun X, Temkin N, Taylor SR, Markowitz AJ, Manley GT, Mukherjee P, TRACK-TBI Investigators . PMID: 33386283.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    17. Point-of-Care Platform Blood Biomarker Testing of Glial Fibrillary Acidic Protein versus S100 Calcium-Binding Protein B for Prediction of Traumatic Brain Injuries: A Transforming Research and Clinical Knowledge in Traumatic Brain Injury Study. J Neurotrauma. 2020 12 01; 37(23):2460-2467. Okonkwo DO, Puffer RC, Puccio AM, Yuh EL, Yue JK, Diaz-Arrastia R, Korley FK, Wang KKW, Sun X, Taylor SR, Mukherjee P, Markowitz AJ, Jain S, Manley GT, Transforming Research and Clinical Knowledge in Traumatic Brain Injury (TRACK-TBI) Investigators . PMID: 32854584.
      View in: PubMed   Mentions: 5     Fields:    
    18. Atypical Presentation of Severe Posterior Reversible Encephalopathy Syndrome: An Important Diagnosis in Neurocritical Care. J Neurosci Rural Pract. 2020 Oct; 11(4):676-677. Deng H, Yue JK, Mukherjee P. PMID: 33144818.
      View in: PubMed   Mentions:
    19. The evolution of white matter microstructural changes after mild traumatic brain injury: A longitudinal DTI and NODDI study. Sci Adv. 2020 Aug; 6(32):eaaz6892. Palacios EM, Owen JP, Yuh EL, Wang MB, Vassar MJ, Ferguson AR, Diaz-Arrastia R, Giacino JT, Okonkwo DO, Robertson CS, Stein MB, Temkin N, Jain S, McCrea M, MacDonald CL, Levin HS, Manley GT, Mukherjee P, TRACK-TBI Investigators . PMID: 32821816.
      View in: PubMed   Mentions: 4     Fields:    
    20. Polytrauma Is Associated with Increased Three- and Six-Month Disability after Traumatic Brain Injury: A TRACK-TBI Pilot Study. Neurotrauma Rep. 2020; 1(1):32-41. Yue JK, Satris GG, Dalle Ore CL, Huie JR, Deng H, Winkler EA, Lee YM, Vassar MJ, Taylor SR, Schnyer DM, Lingsma HF, Puccio AM, Yuh EL, Mukherjee P, Valadka AB, Ferguson AR, Markowitz AJ, Okonkwo DO, Manley GT. PMID: 34223528.
      View in: PubMed   Mentions:
    21. Connectome mapping with edge density imaging differentiates pediatric mild traumatic brain injury from typically developing controls: proof of concept. Pediatr Radiol. 2020 10; 50(11):1594-1601. Raji CA, Wang MB, Nguyen N, Owen JP, Palacios EM, Yuh EL, Mukherjee P. PMID: 32607611.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    22. Invariance of the Bifactor Structure of Mild Traumatic Brain Injury (mTBI) Symptoms on the Rivermead Postconcussion Symptoms Questionnaire Across Time, Demographic Characteristics, and Clinical Groups: A TRACK-TBI Study. Assessment. 2021 09; 28(6):1656-1670. Agtarap S, Kramer MD, Campbell-Sills L, Yuh E, Mukherjee P, Manley GT, McCrea MA, Dikmen S, Giacino JT, Stein MB, Nelson LD, TRACK-TBI Investigators <xref ref-type="aff" rid="aff7-1073191120913941" ptype="a1073191120913941" c . PMID: 32326739.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    23. Spectral graph theory of brain oscillations. Hum Brain Mapp. 2020 08 01; 41(11):2980-2998. Raj A, Cai C, Xie X, Palacios E, Owen J, Mukherjee P, Nagarajan S. PMID: 32202027.
      View in: PubMed   Mentions: 4     Fields:    
    24. ENIGMA and global neuroscience: A decade of large-scale studies of the brain in health and disease across more than 40 countries. Transl Psychiatry. 2020 03 20; 10(1):100. Thompson PM, Jahanshad N, Ching CRK, Salminen LE, Thomopoulos SI, Bright J, Baune BT, Bertolín S, Bralten J, Bruin WB, Bülow R, Chen J, Chye Y, Dannlowski U, de Kovel CGF, Donohoe G, Eyler LT, Faraone SV, Favre P, Filippi CA, Frodl T, Garijo D, Gil Y, Grabe HJ, Grasby KL, Hajek T, Han LKM, Hatton SN, Hilbert K, Ho TC, Holleran L, Homuth G, Hosten N, Houenou J, Ivanov I, Jia T, Kelly S, Klein M, Kwon JS, Laansma MA, Leerssen J, Lueken U, Nunes A, Neill JO, Opel N, Piras F, Piras F, Postema MC, Pozzi E, Shatokhina N, Soriano-Mas C, Spalletta G, Sun D, Teumer A, Tilot AK, Tozzi L, van der Merwe C, Van Someren EJW, van Wingen GA, Völzke H, Walton E, Wang L, Winkler AM, Wittfeld K, Wright MJ, Yun JY, Zhang G, Zhang-James Y, Adhikari BM, Agartz I, Aghajani M, Aleman A, Althoff RR, Altmann A, Andreassen OA, Baron DA, Bartnik-Olson BL, Marie Bas-Hoogendam J, Baskin-Sommers AR, Bearden CE, Berner LA, Boedhoe PSW, Brouwer RM, Buitelaar JK, Caeyenberghs K, Cecil CAM, Cohen RA, Cole JH, Conrod PJ, De Brito SA, de Zwarte SMC, Dennis EL, Desrivieres S, Dima D, Ehrlich S, Esopenko C, Fairchild G, Fisher SE, Fouche JP, Francks C, Frangou S, Franke B, Garavan HP, Glahn DC, Groenewold NA, Gurholt TP, Gutman BA, Hahn T, Harding IH, Hernaus D, Hibar DP, Hillary FG, Hoogman M, Hulshoff Pol HE, Jalbrzikowski M, Karkashadze GA, Klapwijk ET, Knickmeyer RC, Kochunov P, Koerte IK, Kong XZ, Liew SL, Lin AP, Logue MW, Luders E, Macciardi F, Mackey S, Mayer AR, McDonald CR, McMahon AB, Medland SE, Modinos G, Morey RA, Mueller SC, Mukherjee P, Namazova-Baranova L, Nir TM, Olsen A, Paschou P, Pine DS, Pizzagalli F, Rentería ME, Rohrer JD, Sämann PG, Schmaal L, Schumann G, Shiroishi MS, Sisodiya SM, Smit DJA, Sønderby IE, Stein DJ, Stein JL, Tahmasian M, Tate DF, Turner JA, van den Heuvel OA, van der Wee NJA, van der Werf YD, van Erp TGM, van Haren NEM, van Rooij D, van Velzen LS, Veer IM, Veltman DJ, Villalon-Reina JE, Walter H, Whelan CD, Wilde EA, Zarei M, Zelman V, ENIGMA Consortium . PMID: 32198361.
      View in: PubMed   Mentions: 44     Fields:    Translation:Humans
    25. Substance use on admission toxicology screen is associated with peri-injury factors and six-month outcome after traumatic brain injury: A TRACK-TBI Pilot study. J Clin Neurosci. 2020 May; 75:149-156. Yue JK, Phelps RRL, Winkler EA, Deng H, Upadhyayula PS, Vassar MJ, Madhok DY, Schnyer DM, Puccio AM, Lingsma HF, Yuh EL, Mukherjee P, Valadka AB, Okonkwo DO, Manley GT, TRACK-TBI Investigators . PMID: 32173156.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansPHPublic Health
    26. Abnormal Auditory Mismatch Fields in Children and Adolescents With 16p11.2 Deletion and 16p11.2 Duplication. Biol Psychiatry Cogn Neurosci Neuroimaging. 2020 10; 5(10):942-950. Matsuzaki J, Berman JI, Blaskey L, Kuschner ES, Gaetz L, Mukherjee P, Buckner RL, Nagarajan SS, Chung WK, Sherr EH, Roberts TPL, Simons VIP Consortium . PMID: 32033921.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    27. Expert-level detection of acute intracranial hemorrhage on head computed tomography using deep learning. Proc Natl Acad Sci U S A. 2019 11 05; 116(45):22737-22745. Kuo W, H?ne C, Mukherjee P, Malik J, Yuh EL. PMID: 31636195.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    28. Resting State Functional Connectivity is Directly Related to Clinical Presentation of Mild Traumatic Brain Injury. Neurology. 2019 Oct 1; 93(14 Supplement 1):s26-s27. Teena Shetty, Joseph Nguyen, Esther Kim, George Skulikidis, Matthew Garvey, Caitlin Miller, Taylor Sogsil, Apostolos Tsiouris, Sumit Niogi, Aashka Dalal, Kristin Halvorsen, Tianhao Zhang, Joseph Masdeu, Pratik Mukherjee, Luca Marinelli. .
      View in: Publisher Site   Mentions:
    29. Brain Derived Neurotrophic Factor (BDNF) Val66Met Single Nucleotide Polymorphism (rs6265) is Associated With Decreased Functional Outcome After Traumatic Brain Injury: A Multicenter Cohort Study. Neurosurgery. 2019 Sep 1; 66(Supplement_1). John K Yue, Ethan A Winkler, Hansen Deng, Ryan R L Phelps, Ankush Chandra, Mary J Vassar, David M Schnyer, Ava Puccio, Hester F Lingsma, Esther Yuh, Pratik Mukherjee, Alex B Valadka, David O Okonkwo, Geoffrey T Manley. .
      View in: Publisher Site   Mentions:
    30. Recovery After Mild Traumatic Brain Injury in Patients Presenting to US Level I Trauma Centers: A Transforming Research and Clinical Knowledge in Traumatic Brain Injury (TRACK-TBI) Study. JAMA Neurol. 2019 Sep 01; 76(9):1049-1059. Nelson LD, Temkin NR, Dikmen S, Barber J, Giacino JT, Yuh E, Levin HS, McCrea MA, Stein MB, Mukherjee P, Okonkwo DO, Robertson CS, Diaz-Arrastia R, Manley GT, and the TRACK-TBI Investigators , Adeoye O, Badjatia N, Boase K, Bodien Y, Bullock MR, Chesnut R, Corrigan JD, Crawford K, Duhaime AC, Ellenbogen R, Feeser VR, Ferguson A, Foreman B, Gardner R, Gaudette E, Gonzalez L, Gopinath S, Gullapalli R, Hemphill JC, Hotz G, Jain S, Korley F, Kramer J, Kreitzer N, Lindsell C, Machamer J, Madden C, Martin A, McAllister T, Merchant R, Noel F, Palacios E, Perl D, Puccio A, Rabinowitz M, Rosand J, Sander A, Satris G, Schnyer D, Seabury S, Sherer M, Taylor S, Toga A, Valadka A, Vassar MJ, Vespa P, Wang K, Yue JK, Zafonte R. PMID: 31157856.
      View in: PubMed   Mentions: 29     Fields:    
    31. An Open-Source Tool for Anisotropic Radiation Therapy Planning in Neuro-oncology Using DW-MRI Tractography. Front Oncol. 2019; 9:810. Jordan K, Morin O, Wahl M, Amirbekian B, Chapman C, Owen J, Mukherjee P, Braunstein S, Henry R. PMID: 31544062.
      View in: PubMed   Mentions:
    32. The LONI QC System: A Semi-Automated, Web-Based and Freely-Available Environment for the Comprehensive Quality Control of Neuroimaging Data. Front Neuroinform. 2019; 13:60. Kim H, Irimia A, Hobel SM, Pogosyan M, Tang H, Petrosyan P, Blanco REC, Duffy BA, Zhao L, Crawford KL, Liew SL, Clark K, Law M, Mukherjee P, Manley GT, Van Horn JD, Toga AW. PMID: 31555116.
      View in: PubMed   Mentions:
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    59. Cost-Sensitive Active Learning for Intracranial Hemorrhage Detection. Medical Image Computing and Computer Assisted Intervention – MICCAI 2018. 2018 Jan 1; 11072:715-723. Weicheng Kuo, Christian Häne, Esther Yuh, Pratik Mukherjee, Jitendra Malik. .
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    91. Genetic data sharing and privacy. Neuroinformatics. 2015 Jan; 13(1):1-6. Sorani MD, Yue JK, Sharma S, Manley GT, Ferguson AR, TRACK TBI Investigators . PMID: 25326433.
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    107. Test-retest reliability of computational network measurements derived from the structural connectome of the human brain. Brain Connect. 2013; 3(2):160-76. Owen JP, Ziv E, Bukshpun P, Pojman N, Wakahiro M, Berman JI, Roberts TP, Friedman EJ, Sherr EH, Mukherjee P. PMID: 23350832.
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    109. Magnetic resonance imaging improves 3-month outcome prediction in mild traumatic brain injury. Ann Neurol. 2013 Feb; 73(2):224-35. Yuh EL, Mukherjee P, Lingsma HF, Yue JK, Ferguson AR, Gordon WA, Valadka AB, Schnyer DM, Okonkwo DO, Maas AI, Manley GT, TRACK-TBI Investigators . PMID: 23224915.
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    114. Common data elements in radiologic imaging of traumatic brain injury. Arch Phys Med Rehabil. 2010 Nov; 91(11):1661-6. Duhaime AC, Gean AD, Haacke EM, Hicks R, Wintermark M, Mukherjee P, Brody D, Latour L, Riedy G, Common Data Elements Neuroimaging Working Group Members, Pediatric Working Group Members . PMID: 21044709.
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    121. Individual Differences in Distinct Components of Attention are Linked to Anatomical Variations in Distinct White Matter Tracts. Front Neuroanat. 2010; 4:2. Niogi S, Mukherjee P, Ghajar J, McCandliss BD. PMID: 20204143.
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    126. High-resolution phased-array MRI of the human brain at 7 tesla: initial experience in multiple sclerosis patients. J Neuroimaging. 2010 Apr; 20(2):141-7. Metcalf M, Xu D, Okuda DT, Carvajal L, Srinivasan R, Kelley DA, Mukherjee P, Nelson SJ, Vigneron DB, Pelletier D. PMID: 19187478.
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    159. Diffusion Tensor Imaging with Three-dimensional Fiber Tractography of Traumatic Axonal Shearing Injury: An Imaging Correlate for the Posterior Callosal "Disconnection" Syndrome: Case Report. Neurosurgery. 2005 Jan 01; 56(1):E195-E201. Le TH, Mukherjee P, Henry RG, Berman JI, Ware M, Manley GT. PMID: 28184703.
      View in: PubMed   Mentions:    Fields:    
    160. Hand somatosensory cortex activity following selective dorsal rhizotomy: report of three cases with fMRI. Childs Nerv Syst. 2005 Feb; 21(2):115-21. Ojemann JG, McKinstry RC, Mukherjee P, Park TS, Burton H. PMID: 15580514.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    161. Early laminar organization of the human cerebrum demonstrated with diffusion tensor imaging in extremely premature infants. Neuroimage. 2004 Jul; 22(3):1134-40. Maas LC, Mukherjee P, Carballido-Gamio J, Veeraraghavan S, Miller SP, Partridge SC, Henry RG, Barkovich AJ, Vigneron DB. PMID: 15219585.
      View in: PubMed   Mentions: 54     Fields:    Translation:Humans
    162. Diffusion tensor imaging: serial quantitation of white matter tract maturity in premature newborns. Neuroimage. 2004 Jul; 22(3):1302-14. Partridge SC, Mukherjee P, Henry RG, Miller SP, Berman JI, Jin H, Lu Y, Glenn OA, Ferriero DM, Barkovich AJ, Vigneron DB. PMID: 15219602.
      View in: PubMed   Mentions: 128     Fields:    Translation:Humans
    163. Diffusion-tensor imaging-guided tracking of fibers of the pyramidal tract combined with intraoperative cortical stimulation mapping in patients with gliomas. J Neurosurg. 2004 Jul; 101(1):66-72. Berman JI, Berger MS, Mukherjee P, Henry RG. PMID: 15255253.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCTClinical Trials
    164. Single-shot fast spin-echo diffusion tensor imaging of the brain and spine with head and phased array coils at 1.5 T and 3.0 T. Magn Reson Imaging. 2004 Jul; 22(6):751-9. Xu D, Henry RG, Mukherjee P, Carvajal L, Miller SP, Barkovich AJ, Vigneron DB. PMID: 15234443.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    165. Unilateral putaminal CT, MR, and diffusion abnormalities secondary to nonketotic hyperglycemia in the setting of acute neurologic symptoms mimicking stroke. AJNR Am J Neuroradiol. 2004 Jun-Jul; 25(6):975-6. Wintermark M, Fischbein NJ, Mukherjee P, Yuh EL, Dillon WP. PMID: 15205134.
      View in: PubMed   Mentions: 25     Fields:    Translation:Humans
    166. Vitamin B12 deficiency. Arch Neurol. 2004 Jun; 61(6):960. Nakamura K, Mukherjee P, Swanson RA. PMID: 15210541.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    167. Subcortical pathways serving cortical language sites: initial experience with diffusion tensor imaging fiber tracking combined with intraoperative language mapping. Neuroimage. 2004 Feb; 21(2):616-22. Henry RG, Berman JI, Nagarajan SS, Mukherjee P, Berger MS. PMID: 14980564.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    168. Physiological MRI of normal development and developmental delay. Clinical MR Neuroimaging. 2004 Jan 1; 674-689. A. James Barkovich, Pratik Mukherjee, Daniel B. Vigneron. .
      View in: Publisher Site   Mentions:
    169. Diffusion-weighted imaging of acute corticospinal tract injury preceding Wallerian degeneration in the maturing human brain. AJNR Am J Neuroradiol. 2003 Jun-Jul; 24(6):1057-66. Mazumdar A, Mukherjee P, Miller JH, Malde H, McKinstry RC. PMID: 12812927.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    170. Measurement of cerebral blood flow in chronic carotid occlusive disease: comparison of dynamic susceptibility contrast perfusion MR imaging with positron emission tomography. AJNR Am J Neuroradiol. 2003 May; 24(5):862-71. Mukherjee P, Kang HC, Videen TO, McKinstry RC, Powers WJ, Derdeyn CP. PMID: 12748086.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    171. Diffusion-tensor MR imaging of normal brain maturation: a guide to structural development and myelination. AJR Am J Roentgenol. 2003 Mar; 180(3):851-9. Miller JH, McKinstry RC, Philip JV, Mukherjee P, Neil JJ. PMID: 12591710.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    172. Diffusion tensor imaging of normal and injured developing human brain - a technical review. NMR Biomed. 2002 Nov-Dec; 15(7-8):543-52. Neil J, Miller J, Mukherjee P, Hüppi PS. PMID: 12489100.
      View in: PubMed   Mentions: 144     Fields:    Translation:HumansCells
    173. Diffusion-tensor MR imaging of gray and white matter development during normal human brain maturation. AJNR Am J Neuroradiol. 2002 Oct; 23(9):1445-56. Mukherjee P, Miller JH, Shimony JS, Philip JV, Nehra D, Snyder AZ, Conturo TE, Neil JJ, McKinstry RC. PMID: 12372731.
      View in: PubMed   Mentions: 185     Fields:    Translation:Humans
    174. Normal brain maturation during childhood: developmental trends characterized with diffusion-tensor MR imaging. Radiology. 2001 Nov; 221(2):349-58. Mukherjee P, Miller JH, Shimony JS, Conturo TE, Lee BC, Almli CR, McKinstry RC. PMID: 11687675.
      View in: PubMed   Mentions: 170     Fields:    Translation:Humans
    175. Evaluating pediatric brain tumor cellularity with diffusion-tensor imaging. AJR Am J Roentgenol. 2001 Aug; 177(2):449-54. Gauvain KM, McKinstry RC, Mukherjee P, Perry A, Neil JJ, Kaufman BA, Hayashi RJ. PMID: 11461881.
      View in: PubMed   Mentions: 101     Fields:    Translation:Humans
    176. Reversible posterior leukoencephalopathy syndrome: evaluation with diffusion-tensor MR imaging. Radiology. 2001 Jun; 219(3):756-65. Mukherjee P, McKinstry RC. PMID: 11376265.
      View in: PubMed   Mentions: 56     Fields:    Translation:Humans
    177. Differences between gray matter and white matter water diffusion in stroke: diffusion-tensor MR imaging in 12 patients. Radiology. 2000 Apr; 215(1):211-20. Mukherjee P, Bahn MM, McKinstry RC, Shimony JS, Cull TS, Akbudak E, Snyder AZ, Conturo TE. PMID: 10751489.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    178. Improving high-resolution MR bold venographic imaging using a T1 reducing contrast agent. J Magn Reson Imaging. 1999 Aug; 10(2):118-23. Lin W, Mukherjee P, An H, Yu Y, Wang Y, Vo K, Lee B, Kido D, Haacke EM. PMID: 10441013.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    179. MR high-resolution blood oxygenation level-dependent venography of occult (low-flow) vascular lesions. AJNR Am J Neuroradiol. 1999 Aug; 20(7):1239-42. Lee BC, Vo KD, Kido DK, Mukherjee P, Reichenbach J, Lin W, Yoon MS, Haacke M. PMID: 10472978.
      View in: PubMed   Mentions: 43     Fields:    Translation:Humans
    180. The maintained discharge of neurons in the cat lateral geniculate nucleus: spectral analysis and computational modeling. Vis Neurosci. 1998 May-Jun; 15(3):529-39. Mukherjee P, Kaplan E. PMID: 9685205.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    181. Tailoring of variability in the lateral geniculate nucleus of the cat. Biol Cybern. 1996 Sep; 75(3):219-27. Levine MW, Cleland BG, Mukherjee P, Kaplan E. PMID: 8900037.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    182. Dynamics of neurons in the cat lateral geniculate nucleus: in vivo electrophysiology and computational modeling. J Neurophysiol. 1995 Sep; 74(3):1222-43. Mukherjee P, Kaplan E. PMID: 7500146.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
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