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Mark Kelly, PhD

TitleAssociate Director NMR
SchoolUCSF School of Pharmacy
DepartmentPharmaceutical Chemistry
Address600 16th Street
San Francisco CA 94158
Phone415-476-8143
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Alverez C, Bulfer SL, Chakrasali R, Chimenti MS, Deshaies RJ, Green N, Kelly M, LaPorte MG, Lewis TS, Liang M, Moore WJ, Neitz RJ, Peshkov VA, Walters MA, Zhang F, Arkin MR, Wipf P, Huryn DM. Allosteric Indole Amide Inhibitors of p97: Identification of a Novel Probe of the Ubiquitin Pathway. ACS Med Chem Lett. 2016 Feb 11; 7(2):182-7. PMID: 26985295.
      View in: PubMed
    2. Okrut J, Prakash S, Wu Q, Kelly M, Taunton J. Allosteric N-WASP activation by an inter-SH3 domain linker in Nck. Proc Natl Acad Sci U S A. 2015 Nov 24; 112(47):E6436-45. PMID: 26554011; PMCID: PMC4664294 [Available on 05/24/16].
      View in: PubMed, PubMed Central
    3. Chimenti MS, Bulfer SL, Neitz RJ, Renslo AR, Jacobson MP, James TL, Arkin MR, Kelly M. A Fragment-Based Ligand Screen Against Part of a Large Protein Machine: The ND1 Domains of the AAA+ ATPase p97/VCP. J Biomol Screen. 2015 Jul; 20(6):788-800. PMID: 25690569.
      View in: PubMed
    4. Torres IO, Kuchenbecker KM, Nnadi CI, Fletterick RJ, Kelly M, Fujimori DG. Histone demethylase KDM5A is regulated by its reader domain through a positive-feedback mechanism. Nat Commun. 2015; 6:6204. PMID: 25686748.
      View in: PubMed
    5. Pfaff SJ, Chimenti MS, Kelly M, Arkin MR. Biophysical methods for identifying fragment-based inhibitors of protein-protein interactions. Methods Mol Biol. 2015; 1278:587-613. PMID: 25859978.
      View in: PubMed
    6. Street TO, Zeng X, Pellarin R, Bonomi M, Sali A, Kelly M, Chu F, Agard DA. Elucidating the mechanism of substrate recognition by the bacterial Hsp90 molecular chaperone. J Mol Biol. 2014 Jun 12; 426(12):2393-404. PMID: 24726919.
      View in: PubMed
    7. Liu J, Segal MR, Kelly M, Pelton JG, Kim M, James TL, Litt L. 13C NMR metabolomic evaluation of immediate and delayed mild hypothermia in cerebrocortical slices after oxygen-glucose deprivation. Anesthesiology. 2013 Nov; 119(5):1120-36. PMID: 23748856; PMCID: PMC3890426.
      View in: PubMed, PubMed Central
    8. Coenen S, Francis N, Kelly M, Hood K, Nuttall J, Little P, Verheij TJ, Melbye H, Goossens H, Butler CC. Are patient views about antibiotics related to clinician perceptions, management and outcome? A multi-country study in outpatients with acute cough. PLoS One. 2013; 8(10):e76691. PMID: 24194845; PMCID: PMC3806785.
      View in: PubMed, PubMed Central
    9. Farrell EH, Whistance RN, Phillips K, Morgan B, Savage K, Lewis V, Kelly M, Blazeby JM, Kinnersley P, Edwards A. Systematic review and meta-analysis of audio-visual information aids for informed consent for invasive healthcare procedures in clinical practice. Patient Educ Couns. 2014 Jan; 94(1):20-32. PMID: 24041712.
      View in: PubMed
    10. Little P, Stuart B, Francis N, Douglas E, Tonkin-Crine S, Anthierens S, Cals JW, Melbye H, Santer M, Moore M, Coenen S, Butler C, Hood K, Kelly M, Godycki-Cwirko M, Mierzecki A, Torres A, Llor C, Davies M, Mullee M, O'Reilly G, van der Velden A, Geraghty AW, Goossens H, Verheij T, Yardley L. Effects of internet-based training on antibiotic prescribing rates for acute respiratory-tract infections: a multinational, cluster, randomised, factorial, controlled trial. Lancet. 2013 Oct 5; 382(9899):1175-82. PMID: 23915885; PMCID: PMC3807804.
      View in: PubMed, PubMed Central
    11. Kinnersley P, Phillips K, Savage K, Kelly M, Farrell E, Morgan B, Whistance R, Lewis V, Mann MK, Stephens BL, Blazeby J, Elwyn G, Edwards AG. Interventions to promote informed consent for patients undergoing surgical and other invasive healthcare procedures. Cochrane Database Syst Rev. 2013; 7:CD009445. PMID: 23832767.
      View in: PubMed
    12. Liu J, Sheldon RA, Segal MR, Kelly M, Pelton JG, Ferriero DM, James TL, Litt L. 1H nuclear magnetic resonance brain metabolomics in neonatal mice after hypoxia-ischemia distinguished normothermic recovery from mild hypothermia recoveries. Pediatr Res. 2013 Aug; 74(2):170-9. PMID: 23708689; PMCID: PMC3734529.
      View in: PubMed, PubMed Central
    13. Francis NA, Melbye H, Kelly M, Cals JW, Hopstaken RM, Coenen S, Butler CC. Variation in family physicians' recording of auscultation abnormalities in patients with acute cough is not explained by case mix. A study from 12 European networks. Eur J Gen Pract. 2013 Jun; 19(2):77-84. PMID: 23544624.
      View in: PubMed
    14. Fone D, Greene G, Farewell D, White J, Kelly M, Dunstan F. Common mental disorders, neighbourhood income inequality and income deprivation: small-area multilevel analysis. Br J Psychiatry. 2013 Apr; 202(4):286-93. PMID: 23470284; PMCID: PMC3613720.
      View in: PubMed, PubMed Central
    15. Smith CA, Shi CA, Chroust MK, Bliska TE, Kelly M, Jacobson MP, Kortemme T. Design of a phosphorylatable PDZ domain with peptide-specific affinity changes. Structure. 2013 Jan 8; 21(1):54-64. PMID: 23159126.
      View in: PubMed
    16. Fone DL, Dunstan F, White J, Kelly M, Farewell D, John G, Lyons RA, Lloyd K. Cohort profile: the Caerphilly health and social needs electronic cohort study (E-CATALyST). Int J Epidemiol. 2013 Dec; 42(6):1620-8. PMID: 23132614.
      View in: PubMed
    17. Hayes SL, Mann MK, Morgan FM, Kelly M, Weightman AL. Collaboration between local health and local government agencies for health improvement. Cochrane Database Syst Rev. 2012; 10:CD007825. PMID: 23076937.
      View in: PubMed
    18. Liu J, Litt L, Segal MR, Kelly M, Pelton JG, Kim M. Metabolomics of oxidative stress in recent studies of endogenous and exogenously administered intermediate metabolites. Int J Mol Sci. 2011; 12(10):6469-501. PMID: 22072900; PMCID: PMC3210991.
      View in: PubMed, PubMed Central
    19. Foo CK, Ohhashi Y, Kelly M, Tanaka M, Weissman JS. Radically different amyloid conformations dictate the seeding specificity of a chimeric Sup35 prion. J Mol Biol. 2011 Apr 22; 408(1):1-8. PMID: 21333653; PMCID: PMC3070826.
      View in: PubMed, PubMed Central
    20. Liu J, Litt L, Segal MR, Kelly M, Yoshihara HA, James TL. Outcome-related metabolomic patterns from 1H/31P NMR after mild hypothermia treatments of oxygen-glucose deprivation in a neonatal brain slice model of asphyxia. J Cereb Blood Flow Metab. 2011 Feb; 31(2):547-59. PMID: 20717124; PMCID: PMC3010526.
      View in: PubMed, PubMed Central
    21. Kelly M, Egbunike JN, Kinnersley P, Hood K, Owen-Jones E, Button LA, Shaw C, Porter A, Snooks H, Bowden S, Edwards A. Delays in response and triage times reduce patient satisfaction and enablement after using out-of-hours services. Fam Pract. 2010 Dec; 27(6):652-63. PMID: 20671002.
      View in: PubMed
    22. Kinnersley P, Egbunike JN, Kelly M, Hood K, Owen-Jones E, Button LA, Shaw C, Porter A, Snooks H, Bowden S, Edwards A. The need to improve the interface between in-hours and out-of-hours GP care, and between out-of-hours care and self-care. Fam Pract. 2010 Dec; 27(6):664-72. PMID: 20671001.
      View in: PubMed
    23. Frantz C, Barreiro G, Dominguez L, Chen X, Eddy R, Condeelis J, Kelly M, Jacobson MP, Barber DL. Cofilin is a pH sensor for actin free barbed end formation: role of phosphoinositide binding. J Cell Biol. 2008 Dec 1; 183(5):865-79. PMID: 19029335; PMCID: PMC2592832.
      View in: PubMed, PubMed Central
    24. Zeng J, Liu J, Yang GY, Kelly M, James TL, Litt L. Exogenous ethyl pyruvate versus pyruvate during metabolic recovery after oxidative stress in neonatal rat cerebrocortical slices. Anesthesiology. 2007 Oct; 107(4):630-40. PMID: 17893460.
      View in: PubMed
    25. Toyama BH, Kelly M, Gross JD, Weissman JS. The structural basis of yeast prion strain variants. Nature. 2007 Sep 13; 449(7159):233-7. PMID: 17767153.
      View in: PubMed
    26. Liu OW, Kelly M, Chow ED, Madhani HD. Parallel beta-helix proteins required for accurate capsule polysaccharide synthesis and virulence in the yeast Cryptococcus neoformans. Eukaryot Cell. 2007 Apr; 6(4):630-40. PMID: 17337638; PMCID: PMC1865648.
      View in: PubMed, PubMed Central
    27. Zeng J, Yang GY, Ying W, Kelly M, Hirai K, James TL, Swanson RA, Litt L. Pyruvate improves recovery after PARP-1-associated energy failure induced by oxidative stress in neonatal rat cerebrocortical slices. J Cereb Blood Flow Metab. 2007 Feb; 27(2):304-15. PMID: 16736046.
      View in: PubMed
    28. Zeng J, Hirai K, Yang GY, Ying W, Swanson RA, Kelly M, Mayer M, James TL, Litt L. Using 31P NMR spectroscopy at 14.1 Tesla to investigate PARP-1 associated energy failure and metabolic rescue in cerebrocortical slices. J Bioenerg Biomembr. 2004 Aug; 36(4):415-9. PMID: 15377881.
      View in: PubMed
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