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    Jonathan Singer, MD

    TitleAssistant Professor
    SchoolUCSF School of Medicine
    DepartmentMedicine
    Address350 Parnassus
    San Francisco CA 94117
    Phone415-476-6030
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      Collapse Biography 
      Collapse Education and Training
      University of California, San Francisco Residency School of Medicine
      University of California, San FranciscoM.D.School of Medicine2004
      University of California, BerkeleyM.S. School of Public Health2002
      Stanford UniversityB.A.1999
      Collapse Awards and Honors
      UCSF2004Alpha Omega Alpha
      American Thoracic Society2008American Thoracic Society Critical Care Assembly Travel Award
      American Federation for Medical Research2009American Federation for Medical Research Scholar Award
      Breathe California2009Walter Travel Award
      Francis S. North Foundation2013North Senior Fellowship in Pulmonary Diseases

      Collapse Overview 
      Collapse Overview
      Dr. Jonathan Singer is Assistant Professor of Medicine in the Division of Pulmonary, Critical Care, Allergy and Sleep Medicine. He serves as an attending physician in the Lung Transplant Program, where he cares for patients with advanced lung disease before and after lung transplantation. Dr. Singer received his undergraduate degree from Stanford University and a Masters in Health and Medical Sciences from the School of Public Health at UC Berkeley. He received his medical degree from the UC San Francisco School of Medicine. Dr. Singer remained at UC San Francisco, where he completed a residency in Internal Medicine, a fellowships in Pulmonary and Critical Care Medicine and Lung/Heart-Lung Transplantation. He is board certified in Internal Medicine, Pulmonary Medicine and Critical Care Medicine. He is a member of the American Thoracic Society, International Society for Heart and Lung transplantation, American College of Chest Physicians and European Respiratory Society.

      He is Associate Medical Director of Lung Transplant Outcomes Research and is a core investigator with the UCSF Respiratory Epidemiology Group. He has served as Chair of the International Society of Heart and Lung Transplantation Pulmonary Council Quality of Life Workforce since 2012. His research focuses broadly on how lung transplantation improves patient-centered outcomes including functioning, disability, health-related quality of life, and survival. An area of particular interest is how frailty and refined assessments of body composition impact patient-centered outcomes in lung transplant candidates and recipients.

      Collapse Interests
      Lung transplantation, Advanced Lung Disease, Patient Centered Outcomes, Health Related Quality of Life, Body Composition, Frailty, Sarcopenia, Disability, Clinical Research

      Collapse ORNG Applications 
      Collapse Websites
      Collapse Awarded Grants
      Collapse Clinical Trials
      Collapse Featured Publications

      Collapse Bibliographic 
      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
      List All   |   Timeline
      1. Singer JP, Katz PP, Soong A, Shrestha P, Huang D, Ho J, Mindo M, Greenland JR, Hays SR, Golden J, Kukreja J, Kleinhenz ME, Shah RJ, Blanc PD. The Effect of Lung Transplantation on Health Related Quality of Life in the Era of the Lung Allocation Score: A U.S. Prospective Cohort Study. Am J Transplant. 2016 Oct 15. PMID: 27743488.
        View in: PubMed
      2. Singer JP, Lederer DJ, Baldwin MR. Frailty in Pulmonary and Critical Care Medicine. Ann Am Thorac Soc. 2016 Apr 22. PMID: 27104873.
        View in: PubMed
      3. Greenland JR, Wong CM, Ahuja R, Wang AS, Uchida C, Golden JA, Hays SR, Leard LE, Rajalingam R, Singer JP, Kukreja J, Wolters PJ, Caughey GH, Tang Q. Donor-Reactive Regulatory T-Cell Frequency Increases During Acute Cellular Rejection of Lung Allografts. Transplantation. 2016 Apr 13. PMID: 27077597.
        View in: PubMed
      4. Garrett GL, Lowenstein SE, Singer JP, He SY, Arron ST. Trends of skin cancer mortality after transplantation in the United States: 1987 to 2013. J Am Acad Dermatol. 2016 Jul; 75(1):106-12. PMID: 27067869.
        View in: PubMed
      5. Singer JP, Diamond JM, Gries CJ, McDonnough J, Blanc PD, Shah R, Dean MY, Hersh B, Wolters PJ, Tokman S, Arcasoy SM, Ramphal K, Greenland JR, Smith N, Heffernan P, Shah L, Shrestha P, Golden JA, Blumenthal NP, Huang D, Sonett J, Hays S, Oyster M, Katz PP, Robbins H, Brown M, Leard LE, Kukreja J, Bacchetta M, Bush E, D'Ovidio F, Rushefski M, Raza K, Christie JD, Lederer DJ. Frailty Phenotypes, Disability, and Outcomes in Adult Candidates for Lung Transplantation. Am J Respir Crit Care Med. 2015 Dec 1; 192(11):1325-34. PMID: 26258797.
        View in: PubMed
      6. Tokman S, Hays SR, Leard LE, Bush EL, Kukreja J, Kleinhenz ME, Golden JA, Singer JP. Prolonged Barium-Impaction Ileus in Two Lung Transplant Recipients With Systemic Sclerosis: Case Report. Transplant Proc. 2015 Dec; 47(10):2965-7. PMID: 26707322.
        View in: PubMed
      7. Mansh M, Binstock M, Williams K, Hafeez F, Kim J, Glidden D, Boettger R, Hays S, Kukreja J, Golden J, Asgari MM, Chin-Hong P, Singer JP, Arron ST. Voriconazole Exposure and Risk of Cutaneous Squamous Cell Carcinoma, Aspergillus Colonization, Invasive Aspergillosis and Death in Lung Transplant Recipients. Am J Transplant. 2016 Jan; 16(1):262-70. PMID: 26372838.
        View in: PubMed
      8. Kern RM, Singer JP, Koth L, Mooney J, Golden J, Hays S, Greenland J, Wolters P, Ghio E, Jones KD, Leard L, Kukreja J, Blanc PD. Lung transplantation for hypersensitivity pneumonitis. Chest. 2015 Jun; 147(6):1558-65. PMID: 25412059; PMCID: PMC4451710 [Available on 06/01/16].
      9. Tokman S, Singer JP, Devine MS, Westall GP, Aubert JD, Tamm M, Snell GI, Lee JS, Goldberg HJ, Kukreja J, Golden JA, Leard LE, Garcia CK, Hays SR. Clinical outcomes of lung transplant recipients with telomerase mutations. J Heart Lung Transplant. 2015 Oct; 34(10):1318-24. PMID: 26169663.
        View in: PubMed
      10. He SY, Makhzoumi ZH, Singer JP, Chin-Hong PV, Arron ST. Practice variation in Aspergillus prophylaxis and treatment among lung transplant centers: a national survey. Transpl Infect Dis. 2015 Feb; 17(1):14-20. PMID: 25620387.
        View in: PubMed
      11. Singer JP, Chen J, Katz PP, Blanc PD, Kagawa-Singer M, Stewart AL. Defining novel health-related quality of life domains in lung transplantation: a qualitative analysis. Qual Life Res. 2015 Jun; 24(6):1521-33. PMID: 25471287; PMCID: PMC4456337 [Available on 06/01/16].
      12. Singer JP, Peterson ER, Snyder ME, Katz PP, Golden JA, D'Ovidio F, Bacchetta M, Sonett JR, Kukreja J, Shah L, Robbins H, Van Horn K, Shah RJ, Diamond JM, Wickersham N, Sun L, Hays S, Arcasoy SM, Palmer SM, Ware LB, Christie JD, Lederer DJ. Body composition and mortality after adult lung transplantation in the United States. Am J Respir Crit Care Med. 2014 Nov 1; 190(9):1012-21. PMID: 25233138; PMCID: PMC4299586.
      13. Hui C, Kern R, Wojciechowski D, Kukreja J, Golden JA, Hays SR, Singer JP. Belatacept for Maintenance Immunosuppression in Lung Transplantation. J Investig Med High Impact Case Rep. 2014 Jul-Sep; 2(3):2324709614546866. PMID: 26425619; PMCID: PMC4528899.
      14. Kern RM, Seethamraju H, Blanc PD, Sinha N, Loebe M, Golden J, Kukreja J, Scheinin S, Hays S, Kleinhenz ME, Leard L, Hoopes C, Singer JP. The feasibility of lung transplantation in HIV-seropositive patients. Ann Am Thorac Soc. 2014 Jul; 11(6):882-9. PMID: 24964265; PMCID: PMC4213997.
      15. Richardson CB, Singer JP. Lung Transplantation for Scleroderma-related Lung Disease. Curr Respir Care Rep. 2014 Sep; 3(3):79-87. PMID: 27833787.
        View in: PubMed
      16. Ware LB, Landeck M, Koyama T, Zhao Z, Singer J, Kern R, Neidlinger N, Nguyen J, Johnson E, Janz DR, Bernard GR, Lee JW, Matthay MA. A randomized trial of the effects of nebulized albuterol on pulmonary edema in brain-dead organ donors. Am J Transplant. 2014 Mar; 14(3):621-8. PMID: 24730050; PMCID: PMC3986821.
      17. Greenland JR, Jewell NP, Gottschall M, Trivedi NN, Kukreja J, Hays SR, Singer JP, Golden JA, Caughey GH. Bronchoalveolar lavage cell immunophenotyping facilitates diagnosis of lung allograft rejection. Am J Transplant. 2014 Apr; 14(4):831-40. PMID: 24512389; PMCID: PMC4300200.
      18. Hui C, Kern RM, Wojciechowski D, Kukreja J, Golden JA, Hays SR, Singer JP. . Use of Belatacept in a Lung Transplant Recipient. J Invest Med High Impact Case Reports. 2014; (Jul-Sept):1-3.
      19. Williams K, Mansh M, Chin-Hong P, Singer J, Arron ST. Voriconazole-associated cutaneous malignancy: a literature review on photocarcinogenesis in organ transplant recipients. Clin Infect Dis. 2014 Apr; 58(7):997-1002. PMID: 24363331.
        View in: PubMed
      20. Singer JP, Blanc PD, Dean YM, Hays S, Leard L, Kukreja J, Golden J, Katz PP. Development and validation of a lung transplant-specific disability questionnaire. Thorax. 2014 May; 69(5):437-42. PMID: 24355825; PMCID: PMC4113506.
      21. Singer JP, Singer LG. Quality of life in lung transplantation. Semin Respir Crit Care Med. 2013 Jun; 34(3):421-30. PMID: 23821515; PMCID: PMC4238962.
      22. Sottile PD, Iturbe D, Katsumoto TR, Connolly MK, Collard HR, Leard LA, Hays S, Golden JA, Hoopes C, Kukreja J, Singer JP. Outcomes in systemic sclerosis-related lung disease after lung transplantation. Transplantation. 2013 Apr 15; 95(7):975-80. PMID: 23545509; PMCID: PMC3616420.
      23. Singer JP, Chen J, Blanc PD, Leard LE, Kukreja J, Chen H. A thematic analysis of quality of life in lung transplant: the existing evidence and implications for future directions. Am J Transplant. 2013 Apr; 13(4):839-50. PMID: 23432992; PMCID: PMC3622720.
      24. Sayah DM, Schwartz BS, Kukreja J, Singer JP, Golden JA, Leard LE. Scedosporium prolificans pericarditis and mycotic aortic aneurysm in a lung transplant recipient receiving voriconazole prophylaxis. Transpl Infect Dis. 2013 Apr; 15(2):E70-4. PMID: 23387799.
        View in: PubMed
      25. Sayah DM, Koff JL, Leard LE, Hays SR, Golden JA, Singer JP. Rhinovirus and other respiratory viruses exert different effects on lung allograft function that are not mediated through acute rejection. Clin Transplant. 2013 Jan-Feb; 27(1):E64-71. PMID: 23278569; PMCID: PMC3558613.
      26. Singer JP, Yusen RD. Defining patient-reported outcomes in chronic obstructive pulmonary disease: the patient-centered experience. Med Clin North Am. 2012 Jul; 96(4):767-87. PMID: 22793944.
        View in: PubMed
      27. Singer JP, Katz PP, Iribarren C, Omachi TA, Sanchez G, Yelin EH, Cisternas MG, Blanc PD. Both pulmonary and extra-pulmonary factors predict the development of disability in chronic obstructive pulmonary disease. Respiration. 2013; 85(5):375-83. PMID: 22688324; PMCID: PMC3939058.
      28. Zutler M, Singer JP, Omachi TA, Eisner M, Iribarren C, Katz P, Blanc PD. Relationship of obesity with respiratory symptoms and decreased functional capacity in adults without established COPD. Prim Care Respir J. 2012 Jun; 21(2):194-201. PMID: 22453663; PMCID: PMC3523806.
      29. Singer JP, Boker A, Metchnikoff C, Binstock M, Boettger R, Golden JA, Glidden DV, Arron ST. High cumulative dose exposure to voriconazole is associated with cutaneous squamous cell carcinoma in lung transplant recipients. J Heart Lung Transplant. 2012 Jul; 31(7):694-9. PMID: 22484291; PMCID: PMC3371090.
      30. Wiita AP, Roubinian N, Khan Y, Chin-Hong PV, Singer JP, Golden JA, Miller S. Cytomegalovirus disease and infection in lung transplant recipients in the setting of planned indefinite valganciclovir prophylaxis. Transpl Infect Dis. 2012 Jun; 14(3):248-58. PMID: 22385394.
        View in: PubMed
      31. Metchnikoff C, Mully T, Singer JP, Golden JA, Arron ST. The 7th edition AJCC staging system for cutaneous squamous cell carcinoma accurately predicts risk of recurrence for heart and lung transplant recipients. J Am Acad Dermatol. 2012 Nov; 67(5):829-35. PMID: 22285618; PMCID: PMC3345300.
      32. Watkins KD, Boettger RF, Hanger KM, Leard LE, Golden JA, Hoopes CW, Singer JP. Use of sublingual tacrolimus in lung transplant recipients. J Heart Lung Transplant. 2012 Feb; 31(2):127-32. PMID: 22177691.
        View in: PubMed
      33. Smith L, Singer JP, Hayes M, Golden JA, Leard LE. An analysis of potential risk factors for early complications from fiberoptic bronchoscopy in lung transplant recipients. Transpl Int. 2012 Feb; 25(2):172-8. PMID: 22151411.
        View in: PubMed
      34. Singer JP, Chen H, Phelan T, Kukreja J, Golden JA, Blanc PD. Survival following lung transplantation for silicosis and other occupational lung diseases. Occup Med (Lond). 2012 Mar; 62(2):134-7. PMID: 22071439; PMCID: PMC3283165.
      35. Singer JP, Blanc PD, Hoopes C, Golden JA, Koff JL, Leard LE, Cheng S, Chen H. The impact of pretransplant mechanical ventilation on short- and long-term survival after lung transplantation. Am J Transplant. 2011 Oct; 11(10):2197-204. PMID: 21831157; PMCID: PMC4249721.
      36. Singer J, Yelin EH, Katz PP, Sanchez G, Iribarren C, Eisner MD, Blanc PD. Respiratory and skeletal muscle strength in chronic obstructive pulmonary disease: impact on exercise capacity and lower extremity function. J Cardiopulm Rehabil Prev. 2011 Mar-Apr; 31(2):111-9. PMID: 21240003; PMCID: PMC3085880.
      37. Ibrahim SF, Singer JP, Arron ST. Catastrophic squamous cell carcinoma in lung transplant patients treated with voriconazole. Dermatol Surg. 2010 Nov; 36(11):1752-5. PMID: 20533939; PMCID: PMC3046628.
      38. Singer JP, Kohlwes J, Bent S, Zimmerman L, Eisner MD. The impact of a "low-intensity" versus "high-intensity" medical intensive care unit on patient outcomes in critically ill veterans. J Intensive Care Med. 2010 Jul; 25(4):233-9. PMID: 20444736; PMCID: PMC3577353.
      39. Singer JP, Huang MY, Hui C, Blanc PD, Boettger RF, Golden J, Watkins K, Hoopes C, Leard LE. Supratherapeutic anticoagulation from low-molecular-weight heparin in lung transplant recipients. J Heart Lung Transplant. 2010 Sep; 29(9):1009-13. PMID: 20627627; PMCID: PMC3045833.
      40. Lord RV, Park JM, Wickramasinghe K, DeMeester SR, Oberg S, Salonga D, Singer J, Peters JH, Danenberg KD, Demeester TR, Danenberg PV. Vascular endothelial growth factor and basic fibroblast growth factor expression in esophageal adenocarcinoma and Barrett esophagus. J Thorac Cardiovasc Surg. 2003 Feb; 125(2):246-53. PMID: 12579092.
        View in: PubMed
      41. Brabender J, Usadel H, Danenberg KD, Metzger R, Schneider PM, Lord RV, Wickramasinghe K, Lum CE, Park J, Salonga D, Singer J, Sidransky D, Hölscher AH, Meltzer SJ, Danenberg PV. Adenomatous polyposis coli gene promoter hypermethylation in non-small cell lung cancer is associated with survival. Oncogene. 2001 Jun 14; 20(27):3528-32. PMID: 11429699.
        View in: PubMed
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