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Isabel Elaine Allen, PhD

Address550 16th. Street
San Francisco CA 94158
Phone415-514-8148
EmailIsabel.Allen@ucsf.edu
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    Collapse Biography 
    Collapse education and training
    Cornell UniversityPhD1979Statistics
    Collapse Awards and Honors
    CTSI at UCSF2016Consultant of the Year
    Skidmore College2015Creative Thought Matters Award of Distinction
    CTSI at UCSF2014Most Impactful Research
    CTSI at UCSF2013Consultant of the Year
    Alfred P. Sloan Foundation2013Director's Award for Research on Online Education
    American Statistical Association2004Fellow
    American Statistical Association2009 - 2010Best Poster Award
    Babson College2009Excellence in Research

    Collapse Overview 

    Collapse ORNG Applications 
    Collapse Twitter

    Collapse Bibliographic 
    Collapse Selected Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Seaman, JE Allen, IE. Heterogeneity is your friend. Quality Progress. 2017.
    2. Watson C, Busovaca E, Foley JM, Allen IE, Schwarz CG, Jahanshad N, Nir TM, Esmaeili-Firidouni P, Milanini B, Rosen H, Carmichael OT, Thompson PM, Valcour VG. White matter hyperintensities correlate to cognition and fiber tract integrity in older adults with HIV. J Neurovirol. 2017 Jan 18. PMID: 28101804.
      View in: PubMed
    3. Osterberg EC, Gaither TW, Awad MA, Truesdale MD, Allen I, Sutcliffe S, Breyer BN. Correlation between pubic hair grooming and STIs: results from a nationally representative probability sample. Sex Transm Infect. 2016 Dec 05. PMID: 27920223.
      View in: PubMed
    4. Atreya CE, Greene C, McWhirter RM, Ikram NS, Allen I, Van Loon K, Venook AP, Yeh BM, Behr SC. Differential Radiographic Appearance of BRAF V600E-Mutant Metastatic Colorectal Cancer in Patients Matched by Primary Tumor Location. J Natl Compr Canc Netw. 2016 Dec; 14(12):1536-1543. PMID: 27956538.
      View in: PubMed
    5. Juillard C, Cooperman L, Allen I, Pirracchio R, Henderson T, Marquez R, Orellana J, Texada M, Dicker RA. A decade of hospital-based violence intervention: Benefits and shortcomings. J Trauma Acute Care Surg. 2016 Dec; 81(6):1156-1161. PMID: 27653168.
      View in: PubMed
    6. Liebowitz M, Koo J, Wickremasinghe A, Allen IE, Clyman RI. Effects of Prophylactic Indomethacin on Vasopressor-Dependent Hypotension in Extremely Preterm Infants. J Pediatr. 2016 Dec 01. PMID: 27915200.
      View in: PubMed
    7. Selekman RE, Sanford MT, Ko LN, Allen IE, Copp HL. Does perception of catheterization limit its use in pediatric UTI? J Pediatr Urol. 2016 Oct 20. PMID: 27887911.
      View in: PubMed
    8. Demb J, Allen I, Braithwaite D. Utilization of screening mammography in older women according to comorbidity and age: protocol for a systematic review. Syst Rev. 2016 Oct 4; 5(1):168. PMID: 27716433.
      View in: PubMed
    9. Usatin D, Fernandes M, Allen IE, Perito ER, Ostroff J, Heyman MB. Complications of Endoscopic Retrograde Cholangiopancreatography in Pediatric Patients; A Systematic Literature Review and Meta-Analysis. J Pediatr. 2016 Dec; 179:160-165.e3. PMID: 27663215.
      View in: PubMed
    10. Hampson LA, Allen IE, Gaither TW, Lin T, Ting J, Osterberg EC, Wilson L, Breyer BN. Patient-centered Treatment Decisions for Urethral Stricture: Conjoint Analysis Improves Surgical Decision-making. Urology. 2016 Sep 16. PMID: 27645527.
      View in: PubMed
    11. Gaither TW, Allen I, Osterberg EC, Alwal A, Harris CR, Breyer BN. Characterization of Genital Dissatisfaction in a National Sample of U.S. Men. Arch Sex Behav. 2016 Sep 13. PMID: 27623623.
      View in: PubMed
    12. Wang RC, Smith-Bindman R, Whitaker E, Neilson J, Allen IE, Stoller ML, Fahimi J. Effect of Tamsulosin on Stone Passage for Ureteral Stones: A Systematic Review and Meta-analysis. Ann Emerg Med. 2016 Sep 07. PMID: 27616037.
      View in: PubMed
    13. Miles LM, Allen E, Mills K, Clarke R, Uauy R, Dangour AD. Vitamin B-12 status and neurologic function in older people: a cross-sectional analysis of baseline trial data from the Older People and Enhanced Neurological Function (OPEN) study. Am J Clin Nutr. 2016 Sep; 104(3):790-6. PMID: 27534645.
      View in: PubMed
    14. Opondo C, Allen E, Todd J, English M. The Paediatric Admission Quality of Care (PAQC) score: designing a tool to measure the quality of early inpatient paediatric care in a low-income setting. Trop Med Int Health. 2016 Oct; 21(10):1334-1345. PMID: 27391580.
      View in: PubMed
    15. Zhang X, McCulloch CE, Lin F, Lin YC, Allen I, Bansal N, Go AS, Hsu CY, et al. Measurement Error as Alternative Explanation for the Observation that CrCl/GFR Ratio is Higher at Lower GFR. Clin J Am Soc Nephrol. 2016 Aug 3. PMID: 27489301.
      View in: PubMed
    16. Seaman, JE Allen, IE. Plotting for Quality. Quality Progress. 2016; 52-55.
    17. Din N, Allen I, Satariano WA, Demb J, Braithwaite D. Alcohol consumption and mortality after breast cancer diagnosis: The health and functioning in women study. Breast Dis. 2016 Jul 28; 36(2-3):77-89. PMID: 27662274.
      View in: PubMed
    18. Fernandes MA, Usatin D, Allen I, Rhee S, Vu L, et al. Improved enteral tolerance following step procedure: systematic literature review and meta-analysis. Pediatr Surg Int. 2016 Jul 26. PMID: 27461428.
      View in: PubMed
    19. Alwaal A, Harris CR, Awad MA, Allen I, Breyer BN, et al. Comparison of complication rates related to male urethral slings and artificial urinary sphincters for urinary incontinence: national multi-institutional analysis of ACS-NSQIP database. Int Urol Nephrol. 2016 Jul 14. PMID: 27417131.
      View in: PubMed
    20. Selekman RE, Allen IE, Copp HL. Determinants of practice patterns in pediatric UTI management. J Pediatr Urol. 2016 Oct; 12(5):308.e1-308.e6. PMID: 27524422.
      View in: PubMed
    21. Krebs SJ, Slike BM, Sithinamsuwan P, Allen I, Chalermchai T, Tipsuk S, Phanuphak N, Jagodzinski L, Kim JH, Ananworanich J, Marovich MA, Valcour VG. Sex differences in soluble markers vary before and after the initiation of antiretroviral therapy in chronically HIV-infected individuals. AIDS. 2016 Jun 19; 30(10):1533-42. PMID: 26990631.
      View in: PubMed
    22. Bolge SC, Goren A, Brown D, Ginsberg S, Allen I. Openness to and preference for attributes of biologic therapy prior to initiation among patients with rheumatoid arthritis: patient and rheumatologist perspectives and implications for decision making. Patient Prefer Adherence. 2016; 10:1079-90. PMID: 27390518; PMCID: PMC4913989.
    23. Usawachintachit M, Masic S, Allen I, Li J, Chi T, et al. Adopting Ultrasound Guidance for Prone Percutaneous Nephrolithotomy: Evaluating the Learning Curve for the Experienced Surgeon. J Endourol. 2016 Jun 13. PMID: 27150671.
      View in: PubMed
    24. Hellmuth J, Fletcher JL, Valcour V, Kroon E, Ananworanich J, Intasan J, Lerdlum S, Narvid J, Pothisri M, Allen I, Krebs SJ, Slike B, Prueksakaew P, Jagodzinski LL, Puttamaswin S, Phanuphak N, Spudich S, et al. Neurologic signs and symptoms frequently manifest in acute HIV infection. Neurology. 2016 Jul 12; 87(2):148-54. PMID: 27287217.
      View in: PubMed
    25. Jones-Mason K, Allen IE, Bush N, Hamilton S. Epigenetic marks as the link between environment and development: examination of the associations between attachment, socioeconomic status, and methylation of the SLC6A4 gene. Brain Behav. 2016 Jul; 6(7):e00480. PMID: 27458544.
      View in: PubMed
    26. Wendelken LA, Jahanshad N, Rosen HJ, Busovaca E, Allen I, Coppola G, Adams C, Rankin KP, Milanini B, Clifford K, Wojta K, Nir TM, Gutman BA, Thompson PM, Valcour V, et al. ApoE e4 is Associated with Cognition, Brain Integrity and Atrophy in HIV Over Age 60. J Acquir Immune Defic Syndr. 2016 May 25. PMID: 27228100.
      View in: PubMed
    27. Usawachintachit M, Masic S, Chang HC, Allen I, Chi T. Ultrasound Guidance to Assist Percutaneous Nephrolithotomy Reduces Radiation Exposure in Obese Patients. Urology. 2016 Apr 22. PMID: 27112513.
      View in: PubMed
    28. Kluijfhout WP, Pasternak JD, Drake FT, Beninato T, Gosnell JE, Shen WT, Duh QY, Allen I, Vriens MR, de Keizer B, Pampaloni MH, Suh I. Use of PET tracers for parathyroid localization: a systematic review and meta-analysis. Langenbecks Arch Surg. 2016 Apr 16. PMID: 27086309.
      View in: PubMed
    29. Bock M, Duong YN, Kim A, Allen I, Murphy J, Lomen-Hoerth C. Cognitive-behavioral changes in amyotrophic lateral sclerosis: Screening prevalence and impact on patients and caregivers. Amyotroph Lateral Scler Frontotemporal Degener. 2016 Jul-Aug; 17(5-6):366-73. PMID: 27043386.
      View in: PubMed
    30. Meerwijk EL, Parekh A, Oquendo MA, Allen I, Franck LS, Lee KA. Direct versus indirect psychosocial and behavioural interventions to prevent suicide and suicide attempts: a systematic review and meta-analysis. Lancet Psychiatry. 2016 Jun; 3(6):544-54. PMID: 27017086.
      View in: PubMed
    31. Krishnaswami A, Goh AC, Go AS, Lundstrom RJ, Zaroff J, Jang JJ, Allen I. Effectiveness of Percutaneous Coronary Intervention Versus Coronary Artery Bypass Grafting in Patients With End-Stage Renal Disease. Am J Cardiol. 2016 May 15; 117(10):1596-603. PMID: 27013385.
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    32. Ko LN, Chuang KW, Champeau A, Allen IE, Copp HL. Lower Urinary Tract Dysfunction in Elementary School Children: Results of a Cross-Sectional Teacher Survey. J Urol. 2016 Apr; 195(4 Pt 2):1232-8. PMID: 26926533.
      View in: PubMed
    33. Hall MK, Taylor RA, Luty S, Allen I, Moore CL. Impact of point-of-care ultrasonography on ED time to disposition for patients with nontraumatic shock. Am J Emerg Med. 2016 Jun; 34(6):1022-30. PMID: 26988105.
      View in: PubMed
    34. Valcour VG, Spudich SS, Sailasuta N, Phanuphak N, Lerdlum S, Fletcher JL, Kroon ED, Jagodzinski LL, Allen IE, Adams CL, Prueksakaew P, Slike BM, Hellmuth JM, Kim JH, Ananworanich J. Neurological Response to cART vs. cART plus Integrase Inhibitor and CCR5 Antagonist Initiated during Acute HIV. PLoS One. 2015; 10(11):e0142600. PMID: 26555069; PMCID: PMC4640512.
    35. Rodriguez RM, Langdorf MI, Nishijima D, Baumann BM, Hendey GW, Medak AJ, Raja AS, Allen IE, Mower WR. Derivation and Validation of Two Decision Instruments for Selective Chest CT in Blunt Trauma: A Multicenter Prospective Observational Study (NEXUS Chest CT). PLoS Med. 2015 Oct; 12(10):e1001883. PMID: 26440607; PMCID: PMC4595216.
    36. Korner EJ, Morris A, Allen IE, Hurvitz S, Beattie MS, Kalesan B. NatHER: protocol for systematic evaluation of trends in survival among patients with HER2-positive advanced breast cancer. Syst Rev. 2015; 4:133. PMID: 26428301; PMCID: PMC4591587.
    37. Tolaney SM, Tan S, Guo H, Barry W, Van Allen E, Wagle N, Brock J, Larrabee K, Paweletz C, Ivanova E, Janne P, Overmoyer B, Wright JJ, Shapiro GI, Winer EP, Krop IE. Phase II study of tivantinib (ARQ 197) in patients with metastatic triple-negative breast cancer. Invest New Drugs. 2015 Oct; 33(5):1108-14. PMID: 26123926; PMCID: PMC4608248 [Available on 10/01/16].
    38. Gathara D, English M, van Hensbroek MB, Todd J, Allen E. Exploring sources of variability in adherence to guidelines across hospitals in low-income settings: a multi-level analysis of a cross-sectional survey of 22 hospitals. Implement Sci. 2015; 10:60. PMID: 25928803; PMCID: PMC4416316.
    39. Jones-Mason K, Elaine Allen I, Hamilton S, Weiss SJ. Comparative validity of the Adult Attachment Interview and the Adult Attachment Projective. Attach Hum Dev. 2015; 17(5):429-47. PMID: 26362584.
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    40. Gaither TW, Truesdale M, Harris CR, Alwaal A, Shindel AW, Allen IE, Breyer BN. The influence of sexual orientation and sexual role on male grooming-related injuries and infections. J Sex Med. 2015 Mar; 12(3):631-40. PMID: 25442701; PMCID: PMC4599875.
    41. Pukenas EW, Dodson G, Deal ER, Gratz I, Allen E, Burden AR. Simulation-based education with deliberate practice may improve intraoperative handoff skills: a pilot study. J Clin Anesth. 2014 Nov; 26(7):530-8. PMID: 25439416.
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    42. Hall MK, Raven MC, Hall J, Yeh C, Allen I, Rodriguez RM, Tangherlini NL, Sporer KA, Brown JF. EMS-STARS: Emergency Medical Services "Superuser" Transport Associations: An Adult Retrospective Study. Prehosp Emerg Care. 2015 January-March; 19(1):61-67. PMID: 25093273.
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    43. Mills KA, Markun LC, Luciano MS, Rizk R, Allen IE, Racine CA, Starr PA, Alberts JL, Ostrem JL. Effect of subthalamic nucleus deep brain stimulation on dual-task cognitive and motor performance in isolated dystonia. J Neurol Neurosurg Psychiatry. 2015 Apr; 86(4):404-9. PMID: 25012202; PMCID: PMC4392192.
    44. Gelfand AA, Goadsby PJ, Allen IE. The relationship between migraine and infant colic: a systematic review and meta-analysis. Cephalalgia. 2015 Jan; 35(1):63-72. PMID: 24853164.
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    45. Izano M, Satariano WA, Tammemagi MC, Ragland D, Moore DH, Allen E, Naeim A, Sehl ME, Hiatt RA, Kerlikowske K, Sofrygin O, Braithwaite D. Long-term outcomes among African-American and white women with breast cancer: what is the impact of comorbidity? J Geriatr Oncol. 2014 Jul; 5(3):266-75. PMID: 24613574.
      View in: PubMed
    46. Swaney P, Thorp J, Allen I. Vitamin C supplementation in pregnancy--does it decrease rates of preterm birth? A systematic review. Am J Perinatol. 2014 Feb; 31(2):91-8. PMID: 23508703.
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    47. Leff HS, Chow CM, Pepin R, Conley J, Allen IE, Seaman CA. Does one size fit all? What we can and can't learn from a meta-analysis of housing models for persons with mental illness. Psychiatr Serv. 2009 Apr; 60(4):473-82. PMID: 19339322.
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    48. Ross SD, Allen IE, Probst CA, Sercus B, Crean SM, Ranganathan G. Efficacy and safety of erythropoiesis-stimulating proteins in myelodysplastic syndrome: a systematic review and meta-analysis. Oncologist. 2007 Oct; 12(10):1264-73. PMID: 17962620.
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    49. Nayak S, Olkin I, Liu H, Grabe M, Gould MK, Allen IE, Owens DK, Bravata DM. Meta-analysis: accuracy of quantitative ultrasound for identifying patients with osteoporosis. Ann Intern Med. 2006 Jun 6; 144(11):832-41. PMID: 16754925.
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    50. Ross SD, Allen IE, Henry DH, Seaman C, Sercus B, Goodnough LT. Clinical benefits and risks associated with epoetin and darbepoetin in patients with chemotherapy-induced anemia: a systematic review of the literature. Clin Ther. 2006 Jun; 28(6):801-31. PMID: 16860166.
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    51. Leff HS, Wieman DA, McFarland BH, Morrissey JP, Rothbard A, Shern DL, Wylie AM, Boothroyd RA, Stroup TS, Allen IE. Assessment of Medicaid managed behavioral health care for persons with serious mental illness. Psychiatr Serv. 2005 Oct; 56(10):1245-53. PMID: 16215190.
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    52. Leff HS, Cook JA, Gold PB, Toprac M, Blyler C, Goldberg RW, McFarlane W, Shafer M, Allen IE, Camacho-Gonsalves T, Raab B. Effects of job development and job support on competitive employment of persons with severe mental illness. Psychiatr Serv. 2005 Oct; 56(10):1237-44. PMID: 16215189.
      View in: PubMed
    53. Leff HS, McPartland JC, Banks S, Dembling B, Fisher W, Allen IE. Service quality as measured by service fit and mortality among public mental health system service recipients. Ment Health Serv Res. 2004 Jun; 6(2):93-107. PMID: 15224453.
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    54. Allen I . The Pennsylvania Corporate Tax Model. Simulation. 2003; 3(39):75-80.
    55. Allen IE, Ross SD, Borden SP, Monroe MW, Kupelnick B, Connelly JE, Ozer H. Meta-analysis to assess the efficacy of interferon-alpha in patients with follicular non-Hodgkin's lymphoma. J Immunother. 2001 Jan-Feb; 24(1):58-65. PMID: 11211149.
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    56. Ross SD, Sheinhait IA, Harrison KJ, Kvasz M, Connelly JE, Shea SA, Allen IE. Systematic review and meta-analysis of the literature regarding the diagnosis of sleep apnea. Sleep. 2000 Jun 15; 23(4):519-32. PMID: 10875559.
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    57. Kvasz M, Allen IE, Gordon MJ, Ro EY, Estok R, Olkin I, Ross SD. Adverse drug reactions in hospitalized patients: A critique of a meta-analysis. MedGenMed. 2000 Apr 27; 2(2):E3. PMID: 11104449.
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    58. Allen IE, Monroe M, Connelly J, Cintron R, Ross SD. Effect of postmenopausal hormone replacement therapy on dental outcomes: systematic review of the literature and pharmacoeconomic analysis. Manag Care Interface. 2000 Apr; 13(4):93-9. PMID: 11066291.
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    59. Allen IE, Olkin I. Estimating time to conduct a meta-analysis from number of citations retrieved. JAMA. 1999 Aug 18; 282(7):634-5. PMID: 10517715.
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    60. Ross SD, Allen IE, Connelly JE, Korenblat BM, Smith ME, Bishop D, Luo D. Clinical outcomes in statin treatment trials: a meta-analysis. Arch Intern Med. 1999 Aug 9-23; 159(15):1793-802. PMID: 10448784.
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    61. Ross SD, Allen IE, Harrison KJ, Kvasz M, Connelly J, Sheinhait IA. Systematic review of the literature regarding the diagnosis of sleep apnea. Evid Rep Technol Assess (Summ). 1998 Dec; (1):1-4. PMID: 10510270.
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    62. Allen IE, Connelly J, Luo D, Ross SD. Comparison of conventional Papanicolaou smears and a fluid-based, thin-layer system for the detection of abnormal cervical lesions: systematic review and meta-analysis. Prim Care Update Ob Gyns. 1998 Jul 1; 5(4):163. PMID: 10838304.
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    63. Ross SD, Kupelnick B, Kumashiro M, Arellano FM, Mohanty N, Allen IE. Risk of serious adverse events in hypertensive patients receiving isradipine: a meta-analysis. J Hum Hypertens. 1997 Nov; 11(11):743-51. PMID: 9416985.
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    64. Allen IE, Kupelnick B, Ross S, Ballantyne J, Gratz I. Criticism of Hartung's analysis. Anesth Analg. 1997 May; 84(5):1169-70. PMID: 9141962.
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    65. Nedelman MA, Shealy DJ, Boulin R, Brunt E, Seasholtz JI, Allen IE, McCartney JE, Warren FD, Oppermann H, Pang RH. Rapid infarct imaging with a technetium-99m-labeled antimyosin recombinant single-chain Fv: evaluation in a canine model of acute myocardial infarction. J Nucl Med. 1993 Feb; 34(2):234-41. PMID: 8429342.
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    66. Wortel CH, von der Möhlen MA, van Deventer SJ, Sprung CL, Jastremski M, Lubbers MJ, Smith CR, Allen I, ten Cate JW. Effectiveness of a human monoclonal anti-endotoxin antibody (HA-1A) in gram-negative sepsis: relationship to endotoxin and cytokine levels. J Infect Dis. 1992 Dec; 166(6):1367-74. PMID: 1431255.
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    67. Ziegler EJ, Fisher CJ, Sprung CL, Straube RC, Sadoff JC, Foulke GE, Wortel CH, Fink MP, Dellinger RP, Teng NN. Treatment of gram-negative bacteremia and septic shock with HA-1A human monoclonal antibody against endotoxin. A randomized, double-blind, placebo-controlled trial. The HA-1A Sepsis Study Group. N Engl J Med. 1991 Feb 14; 324(7):429-36. PMID: 1988827.
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    68. Malsch E, Ho L, Booth MJ, Allen E. Survey of Anesthetic Coverage of Electroconvulsive Therapy in the State of Pennsylvania, 1988. Convuls Ther. 1991; 7(4):262-274. PMID: 11941131.
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    69. Hardin JM, Khazaeli MB, Allen I, Dating C, LoBuglio AF. Limited sampling models for HA-1A IgM monoclonal antibody. Hum Antibodies Hybridomas. 1990; 1(2):115-9. PMID: 2103353.
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    70. Deitch MW, Allen I, Pascucci VL. Antihypertensive therapy with indoramin in the elderly. J Cardiovasc Pharmacol. 1986; 8 Suppl 2:S88-92. PMID: 2423807.
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    71. Bowers EJ, Allen IE, Hickey RJ. Cigarette smoking: example of behavioral regulation of physiological homeostasis? Public Health Rep. 1984 Mar-Apr; 99(2):108-10. PMID: 6424158; PMCID: PMC1424541.
    72. Hickey RJ, Allen IE. Surgeons General's reports on smoking and cancer: uses and misuses of statistics and of science. Public Health Rep. 1983 Sep-Oct; 98(5):410-1. PMID: 6414025; PMCID: PMC1424490.
    73. IE Allen, RD Levinson and GS Gilbert. Small Model Revenue Estimating During Inflationary Periods. Modeling and Simulation. 1980; (XL):1325-1329.
    74. Allen I . Fertility Estimation: An evaluation of techniques for less developed countries. Estadistica. 1980; 123(XXXIV):173-195.
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